RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 POGZQ7Z3K3 1410 aa23.86■■□□□ 1.41
SREK1-212ENST00000522912 KDM5CP41229 1560 aa23.85■■□□□ 1.41
SREK1-212ENST00000522912 MAP3K4Q9Y6R4 1608 aa23.85■■□□□ 1.41
SREK1-212ENST00000522912 DHX29Q7Z478 1369 aaKnown RBP23.84■■□□□ 1.41
SREK1-212ENST00000522912 EIF2AK4Q9P2K8 1649 aaKnown RBP23.84■■□□□ 1.41
SREK1-212ENST00000522912 NEO1Q92859 1461 aa23.83■■□□□ 1.41
SREK1-212ENST00000522912 EIF4G2P78344 907 aaKnown RBP eCLIP23.83■■□□□ 1.41
SREK1-212ENST00000522912 CCDC144AA2RUR9 1427 aa23.82■■□□□ 1.4
SREK1-212ENST00000522912 GLI2P10070 1586 aa23.82■■□□□ 1.4
SREK1-212ENST00000522912 ATP10AO60312 1499 aa23.81■■□□□ 1.4
SREK1-212ENST00000522912 E9PCH4 1651 aa23.81■■□□□ 1.4
SREK1-212ENST00000522912 UHRF1BP1Q6BDS2 1440 aa23.81■■□□□ 1.4
SREK1-212ENST00000522912 VWDEQ8N2E2 1590 aa23.79■■□□□ 1.4
SREK1-212ENST00000522912 MLH3Q9UHC1 1453 aa23.79■■□□□ 1.4
SREK1-212ENST00000522912 MROH1Q8NDA8 1641 aa23.78■■□□□ 1.4
SREK1-212ENST00000522912 KIF3BO15066 747 aa23.78■■□□□ 1.4
SREK1-212ENST00000522912 HECW2Q9P2P5 1572 aa23.78■■□□□ 1.4
SREK1-212ENST00000522912 TET3O43151 1660 aa23.76■■□□□ 1.39
SREK1-212ENST00000522912 ZNF326Q5BKZ1 582 aaKnown RBP23.76■■□□□ 1.39
SREK1-212ENST00000522912 PRDM15P57071 1507 aaPredicted RBP23.76■■□□□ 1.39
SREK1-212ENST00000522912 SPATA31E1Q6ZUB1 1445 aa23.76■■□□□ 1.39
SREK1-212ENST00000522912 A2MP01023 1474 aa23.75■■□□□ 1.39
SREK1-212ENST00000522912 DIP2BQ9P265 1576 aa23.74■■□□□ 1.39
SREK1-212ENST00000522912 DCAF11Q8TEB1 546 aa23.74■■□□□ 1.39
SREK1-212ENST00000522912 KANK1Q14678 1352 aa23.73■■□□□ 1.39
SREK1-212ENST00000522912 KDM2AQ9Y2K7 1162 aa23.73■■□□□ 1.39
SREK1-212ENST00000522912 RAPGEF3O95398 923 aa23.72■■□□□ 1.39
SREK1-212ENST00000522912 FRMPD1Q5SYB0 1578 aa23.72■■□□□ 1.39
SREK1-212ENST00000522912 RICTORQ6R327 1708 aa23.72■■□□□ 1.39
SREK1-212ENST00000522912 ABCA6Q8N139 1617 aa23.72■■□□□ 1.39
SREK1-212ENST00000522912 WASHC2AQ641Q2 1341 aa23.71■■□□□ 1.39
SREK1-212ENST00000522912 RALGAPBQ86X10 1494 aa23.71■■□□□ 1.39
SREK1-212ENST00000522912 SPHKAPQ2M3C7 1700 aa23.71■■□□□ 1.39
SREK1-212ENST00000522912 FAM69CQ0P6D2 419 aa23.7■■□□□ 1.38
SREK1-212ENST00000522912 YTHDC1Q96MU7 727 aaKnown RBP23.7■■□□□ 1.38
SREK1-212ENST00000522912 RNF17Q9BXT8 1623 aaKnown RBP23.7■■□□□ 1.38
SREK1-212ENST00000522912 RGL3Q3MIN7 710 aa23.69■■□□□ 1.38
SREK1-212ENST00000522912 PTPRTO14522 1441 aa23.68■■□□□ 1.38
SREK1-212ENST00000522912 TRPM2O94759 1503 aa23.68■■□□□ 1.38
SREK1-212ENST00000522912 C11orf95C9JLR9 678 aaPredicted RBP23.67■■□□□ 1.38
SREK1-212ENST00000522912 POLR1AO95602 1720 aaPredicted RBP23.65■■□□□ 1.38
SREK1-212ENST00000522912 BCORL1Q5H9F3 1711 aa23.65■■□□□ 1.38
SREK1-212ENST00000522912 TSPOAP1O95153 1857 aa23.65■■□□□ 1.38
SREK1-212ENST00000522912 CEP152O94986 1710 aa23.65■■□□□ 1.38
SREK1-212ENST00000522912 USP47Q96K76 1375 aa23.65■■□□□ 1.38
SREK1-212ENST00000522912 PRAG1Q86YV5 1406 aa23.64■■□□□ 1.38
SREK1-212ENST00000522912 PPRC1Q5VV67 1664 aaKnown RBP23.64■■□□□ 1.38
SREK1-212ENST00000522912 CENPBP07199 599 aaPredicted RBP23.64■■□□□ 1.37
SREK1-212ENST00000522912 DIP2CQ9Y2E4 1556 aa23.63■■□□□ 1.37
SREK1-212ENST00000522912 CLTCL1P53675 1640 aa23.63■■□□□ 1.37
SREK1-212ENST00000522912 TRPM1Q7Z4N2 1603 aa23.63■■□□□ 1.37
SREK1-212ENST00000522912 CCDC7Q96M83 1385 aa23.63■■□□□ 1.37
SREK1-212ENST00000522912 EFCAB6Q5THR3 1501 aa23.62■■□□□ 1.37
SREK1-212ENST00000522912 LMTK2Q8IWU2 1503 aa23.62■■□□□ 1.37
SREK1-212ENST00000522912 CARD11Q9BXL7 1154 aa23.59■■□□□ 1.37
SREK1-212ENST00000522912 YEATS2Q9ULM3 1422 aa23.57■■□□□ 1.36
SREK1-212ENST00000522912 KIF7Q2M1P5 1343 aa23.56■■□□□ 1.36
SREK1-212ENST00000522912 ANP32CO43423 234 aa23.56■■□□□ 1.36
SREK1-212ENST00000522912 GGT6Q6P531 493 aa23.55■■□□□ 1.36
SREK1-212ENST00000522912 ROCK2O75116 1388 aaKnown RBP23.55■■□□□ 1.36
SREK1-212ENST00000522912 KIF13AQ9H1H9 1805 aa23.55■■□□□ 1.36
SREK1-212ENST00000522912 ZMYM4Q5VZL5 1548 aa23.54■■□□□ 1.36
SREK1-212ENST00000522912 CNTLNQ9NXG0 1405 aa23.53■■□□□ 1.36
SREK1-212ENST00000522912 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
SREK1-212ENST00000522912 NBPF1Q3BBV0 1214 aa23.51■■□□□ 1.35
SREK1-212ENST00000522912 ABCC3O15438 1527 aa23.51■■□□□ 1.35
SREK1-212ENST00000522912 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
SREK1-212ENST00000522912 GPRASP1Q5JY77 1395 aa23.5■■□□□ 1.35
SREK1-212ENST00000522912 LAMC1P11047 1609 aa23.5■■□□□ 1.35
SREK1-212ENST00000522912 NEURL4Q96JN8 1562 aa23.49■■□□□ 1.35
SREK1-212ENST00000522912 KIF1BO60333 1816 aa23.49■■□□□ 1.35
SREK1-212ENST00000522912 MADDQ8WXG6 1647 aa23.48■■□□□ 1.35
SREK1-212ENST00000522912 NPATQ14207 1427 aa23.48■■□□□ 1.35
SREK1-212ENST00000522912 CCER2I3L3R5 266 aa23.47■■□□□ 1.35
SREK1-212ENST00000522912 ST20-MTHFSA0A0A6YYL1 179 aa23.47■■□□□ 1.35
SREK1-212ENST00000522912 CAMSAP1Q5T5Y3 1602 aa23.47■■□□□ 1.35
SREK1-212ENST00000522912 WASHC2CQ9Y4E1 1318 aa23.47■■□□□ 1.35
SREK1-212ENST00000522912 MROH2AA6NES4 1674 aa23.43■■□□□ 1.34
SREK1-212ENST00000522912 ARID4BQ4LE39 1312 aaPredicted RBP23.43■■□□□ 1.34
SREK1-212ENST00000522912 STAC3Q96MF2 364 aa23.42■■□□□ 1.34
SREK1-212ENST00000522912 SIGLEC1Q9BZZ2 1709 aa23.42■■□□□ 1.34
SREK1-212ENST00000522912 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
SREK1-212ENST00000522912 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
SREK1-212ENST00000522912 IFT172Q9UG01 1749 aa23.39■■□□□ 1.34
SREK1-212ENST00000522912 COL17A1Q9UMD9 1497 aaPredicted RBP23.38■■□□□ 1.33
SREK1-212ENST00000522912 ADGRB3O60242 1522 aa23.37■■□□□ 1.33
SREK1-212ENST00000522912 POLR3GLQ9BT43 218 aa23.37■■□□□ 1.33
SREK1-212ENST00000522912 NOS1P29475 1434 aa23.36■■□□□ 1.33
SREK1-212ENST00000522912 REREQ9P2R6 1566 aa23.36■■□□□ 1.33
SREK1-212ENST00000522912 ARHGAP31Q2M1Z3 1444 aa23.35■■□□□ 1.33
SREK1-212ENST00000522912 MYOM2P54296 1465 aa23.35■■□□□ 1.33
SREK1-212ENST00000522912 KIAA1210Q9ULL0 1709 aa23.34■■□□□ 1.33
SREK1-212ENST00000522912 IQGAP1P46940 1657 aa23.34■■□□□ 1.33
SREK1-212ENST00000522912 SYNMO15061 1565 aa23.33■■□□□ 1.33
SREK1-212ENST00000522912 PIK3C2BO00750 1634 aa23.32■■□□□ 1.32
SREK1-212ENST00000522912 PRKRIP1Q9H875 184 aaPredicted RBP23.32■■□□□ 1.32
SREK1-212ENST00000522912 AGLP35573 1532 aa23.31■■□□□ 1.32
SREK1-212ENST00000522912 TESK2Q96S53 571 aa23.31■■□□□ 1.32
SREK1-212ENST00000522912 ADGRF5Q8IZF2 1346 aa23.3■■□□□ 1.32
SREK1-212ENST00000522912 CHGAP10645 457 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 1148.9 ms