RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 RAPGEF2Q9Y4G8 1499 aa9.14□□□□□ -0.95
SDC2-206ENST00000521590 ZNF142P52746 1687 aaPredicted RBP9.13□□□□□ -0.95
SDC2-206ENST00000521590 CPS1P31327 1500 aa9.13□□□□□ -0.95
SDC2-206ENST00000521590 PLA2R1Q13018 1463 aa9.13□□□□□ -0.95
SDC2-206ENST00000521590 MNX1P50219 401 aaPredicted RBP9.12□□□□□ -0.95
SDC2-206ENST00000521590 PKD2Q13563 968 aa9.12□□□□□ -0.95
SDC2-206ENST00000521590 PHF12Q96QT6 1004 aa9.12□□□□□ -0.95
SDC2-206ENST00000521590 PTPRKQ15262 1439 aa9.12□□□□□ -0.95
SDC2-206ENST00000521590 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.11□□□□□ -0.95
SDC2-206ENST00000521590 SHANK2Q9UPX8 1470 aa9.1□□□□□ -0.95
SDC2-206ENST00000521590 REREQ9P2R6 1566 aa9.1□□□□□ -0.95
SDC2-206ENST00000521590 MROH2AA6NES4 1674 aa9.1□□□□□ -0.95
SDC2-206ENST00000521590 POLR1AO95602 1720 aaPredicted RBP9.09□□□□□ -0.95
SDC2-206ENST00000521590 NPATQ14207 1427 aa9.09□□□□□ -0.95
SDC2-206ENST00000521590 SCAPERQ9BY12 1400 aa9.09□□□□□ -0.95
SDC2-206ENST00000521590 POTEB2H3BUK9 544 aa9.09□□□□□ -0.95
SDC2-206ENST00000521590 AGLP35573 1532 aa9.09□□□□□ -0.95
SDC2-206ENST00000521590 MYO3AQ8NEV4 1616 aa9.09□□□□□ -0.95
SDC2-206ENST00000521590 RAPGEF6Q8TEU7 1601 aa9.08□□□□□ -0.96
SDC2-206ENST00000521590 DIP2CQ9Y2E4 1556 aa9.07□□□□□ -0.96
SDC2-206ENST00000521590 STRCP1A6NGW2 1772 aa9.07□□□□□ -0.96
SDC2-206ENST00000521590 VWDEQ8N2E2 1590 aa9.07□□□□□ -0.96
SDC2-206ENST00000521590 NEURL4Q96JN8 1562 aa9.07□□□□□ -0.96
SDC2-206ENST00000521590 CEP170BQ9Y4F5 1589 aaPredicted RBP9.07□□□□□ -0.96
SDC2-206ENST00000521590 OTUD5Q96G74 571 aa9.06□□□□□ -0.96
SDC2-206ENST00000521590 KDM5CP41229 1560 aa9.05□□□□□ -0.96
SDC2-206ENST00000521590 PELP1Q8IZL8 1130 aaKnown RBP9.05□□□□□ -0.96
SDC2-206ENST00000521590 ABCA6Q8N139 1617 aa9.05□□□□□ -0.96
SDC2-206ENST00000521590 NUP153P49790 1475 aaKnown RBP9.03□□□□□ -0.96
SDC2-206ENST00000521590 PAK3O75914 559 aaPredicted RBP9.03□□□□□ -0.96
SDC2-206ENST00000521590 CNTLNQ9NXG0 1405 aa9.03□□□□□ -0.96
SDC2-206ENST00000521590 DNMT1P26358 1616 aaKnown RBP9.02□□□□□ -0.96
SDC2-206ENST00000521590 RNF17Q9BXT8 1623 aaKnown RBP9.02□□□□□ -0.96
SDC2-206ENST00000521590 ZMYM3Q14202 1370 aa9.01□□□□□ -0.97
SDC2-206ENST00000521590 XIRP1Q702N8 1843 aaKnown RBP9.01□□□□□ -0.97
SDC2-206ENST00000521590 PLCH2O75038 1416 aa9.01□□□□□ -0.97
SDC2-206ENST00000521590 ESF1Q9H501 851 aaKnown RBP9.01□□□□□ -0.97
SDC2-206ENST00000521590 P3H3Q8IVL6 736 aa9□□□□□ -0.97
SDC2-206ENST00000521590 ZNF518AQ6AHZ1 1483 aa9□□□□□ -0.97
SDC2-206ENST00000521590 CLTCQ00610 1675 aaKnown RBP9□□□□□ -0.97
SDC2-206ENST00000521590 LRRC7Q96NW7 1537 aa9□□□□□ -0.97
SDC2-206ENST00000521590 PLEKHD1A6NEE1 506 aa8.99□□□□□ -0.97
SDC2-206ENST00000521590 AFAP1Q8N556 730 aa8.99□□□□□ -0.97
SDC2-206ENST00000521590 MYO5CQ9NQX4 1742 aa8.99□□□□□ -0.97
SDC2-206ENST00000521590 MS4A3Q96HJ5 214 aa8.98□□□□□ -0.97
SDC2-206ENST00000521590 MLH3Q9UHC1 1453 aa8.97□□□□□ -0.97
SDC2-206ENST00000521590 PROM2Q8N271 834 aa8.97□□□□□ -0.97
SDC2-206ENST00000521590 SAMD9Q5K651 1589 aa8.97□□□□□ -0.97
SDC2-206ENST00000521590 KIDINS220Q9ULH0 1771 aa8.96□□□□□ -0.97
SDC2-206ENST00000521590 SYNMO15061 1565 aa8.96□□□□□ -0.97
SDC2-206ENST00000521590 SETBP1Q9Y6X0 1596 aa8.96□□□□□ -0.97
SDC2-206ENST00000521590 FAM9AQ8IZU1 332 aaPredicted RBP8.96□□□□□ -0.98
SDC2-206ENST00000521590 A2ML1A8K2U0 1454 aa8.96□□□□□ -0.98
SDC2-206ENST00000521590 ATMINO43313 823 aaPredicted RBP8.94□□□□□ -0.98
SDC2-206ENST00000521590 EFCAB2Q5VUJ9 269 aa8.94□□□□□ -0.98
SDC2-206ENST00000521590 ASTLQ6HA08 431 aaPredicted RBP8.94□□□□□ -0.98
SDC2-206ENST00000521590 TRIM52Q96A61 297 aa8.94□□□□□ -0.98
SDC2-206ENST00000521590 PLSCR2Q9NRY7 297 aa8.94□□□□□ -0.98
SDC2-206ENST00000521590 FAM135BQ49AJ0 1406 aa8.94□□□□□ -0.98
SDC2-206ENST00000521590 MED14O60244 1454 aa8.94□□□□□ -0.98
SDC2-206ENST00000521590 DEPDC5O75140 1603 aa8.94□□□□□ -0.98
SDC2-206ENST00000521590 POTEJP0CG39 1038 aa8.93□□□□□ -0.98
SDC2-206ENST00000521590 IFFO2Q5TF58 517 aa8.93□□□□□ -0.98
SDC2-206ENST00000521590 IQGAP1P46940 1657 aa8.92□□□□□ -0.98
SDC2-206ENST00000521590 ROBO1Q9Y6N7 1651 aa8.92□□□□□ -0.98
SDC2-206ENST00000521590 ITSN2Q9NZM3 1697 aa8.91□□□□□ -0.98
SDC2-206ENST00000521590 TSPYL2Q9H2G4 693 aaPredicted RBP8.91□□□□□ -0.98
SDC2-206ENST00000521590 METRNQ9UJH8 293 aa8.91□□□□□ -0.98
SDC2-206ENST00000521590 CDC42BPBQ9Y5S2 1711 aa8.91□□□□□ -0.98
SDC2-206ENST00000521590 MYT1LQ9UL68 1186 aa8.9□□□□□ -0.98
SDC2-206ENST00000521590 CCDC61Q9Y6R9 512 aa8.9□□□□□ -0.98
SDC2-206ENST00000521590 CDK12Q9NYV4 1490 aaPredicted RBP8.89□□□□□ -0.99
SDC2-206ENST00000521590 NPHP4O75161 1426 aaPredicted RBP8.89□□□□□ -0.99
SDC2-206ENST00000521590 EP400Q96L91 3159 aa8.89□□□□□ -0.99
SDC2-206ENST00000521590 ZC3H13Q5T200 1668 aaKnown RBP8.89□□□□□ -0.99
SDC2-206ENST00000521590 LRP6O75581 1613 aa8.88□□□□□ -0.99
SDC2-206ENST00000521590 SUPT5HO00267 1087 aaKnown RBP8.88□□□□□ -0.99
SDC2-206ENST00000521590 ANKLE2Q86XL3 938 aa8.88□□□□□ -0.99
SDC2-206ENST00000521590 CDK13Q14004 1512 aaKnown RBP8.88□□□□□ -0.99
SDC2-206ENST00000521590 PHLPP1O60346 1717 aa8.88□□□□□ -0.99
SDC2-206ENST00000521590 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.87□□□□□ -0.99
SDC2-206ENST00000521590 ABCC1P33527 1531 aa8.87□□□□□ -0.99
SDC2-206ENST00000521590 KIF14Q15058 1648 aa8.87□□□□□ -0.99
SDC2-206ENST00000521590 ARHGAP5Q13017 1502 aa8.86□□□□□ -0.99
SDC2-206ENST00000521590 POTEMA6NI47 508 aa8.86□□□□□ -0.99
SDC2-206ENST00000521590 RXRBP28702 533 aa8.86□□□□□ -0.99
SDC2-206ENST00000521590 ATN1P54259 1190 aaPredicted RBP8.86□□□□□ -0.99
SDC2-206ENST00000521590 ZNF772Q68DY9 489 aaPredicted RBP8.86□□□□□ -0.99
SDC2-206ENST00000521590 SLC39A7Q92504 469 aa8.86□□□□□ -0.99
SDC2-206ENST00000521590 RBM33Q96EV2 1170 aaKnown RBP8.86□□□□□ -0.99
SDC2-206ENST00000521590 PRXQ9BXM0 1461 aa8.85□□□□□ -0.99
SDC2-206ENST00000521590 C7P10643 843 aa8.85□□□□□ -0.99
SDC2-206ENST00000521590 KIF12Q96FN5 646 aa8.85□□□□□ -0.99
SDC2-206ENST00000521590 TRPC6Q9Y210 931 aa8.85□□□□□ -0.99
SDC2-206ENST00000521590 LRP5O75197 1615 aa8.84□□□□□ -0.99
SDC2-206ENST00000521590 PLXNC1O60486 1568 aa8.84□□□□□ -0.99
SDC2-206ENST00000521590 JCADQ9P266 1359 aa8.84□□□□□ -0.99
SDC2-206ENST00000521590 POTEGQ6S5H5 508 aa8.83□□□□□ -1
SDC2-206ENST00000521590 COL16A1Q07092 1604 aaPredicted RBP8.83□□□□□ -1
SDC2-206ENST00000521590 POTEFA5A3E0 1075 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms