RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 ASXL2Q76L83 1435 aa19.39■□□□□ 0.69
SMIM12-206ENST00000521580 FANCAO15360 1455 aa19.38■□□□□ 0.69
SMIM12-206ENST00000521580 RALGAPBQ86X10 1494 aa19.37■□□□□ 0.69
SMIM12-206ENST00000521580 CNGB1Q14028 1251 aaPredicted RBP19.36■□□□□ 0.69
SMIM12-206ENST00000521580 ARAP3Q8WWN8 1544 aa19.36■□□□□ 0.69
SMIM12-206ENST00000521580 PLA2R1Q13018 1463 aa19.36■□□□□ 0.69
SMIM12-206ENST00000521580 PRKRIP1Q9H875 184 aaPredicted RBP19.35■□□□□ 0.69
SMIM12-206ENST00000521580 ROCK2O75116 1388 aaKnown RBP19.34■□□□□ 0.69
SMIM12-206ENST00000521580 SCAPERQ9BY12 1400 aa19.34■□□□□ 0.69
SMIM12-206ENST00000521580 RTEL1-TNFRSF6BF6WH68 1400 aa19.33■□□□□ 0.69
SMIM12-206ENST00000521580 IQGAP3Q86VI3 1631 aa19.33■□□□□ 0.69
SMIM12-206ENST00000521580 ST20-MTHFSA0A0A6YYL1 179 aa19.33■□□□□ 0.68
SMIM12-206ENST00000521580 ADGRL1O94910 1474 aa19.32■□□□□ 0.68
SMIM12-206ENST00000521580 HNRNPUQ00839 825 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMIM12-206ENST00000521580 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
SMIM12-206ENST00000521580 KDM5CP41229 1560 aa19.3■□□□□ 0.68
SMIM12-206ENST00000521580 CCDC184Q52MB2 194 aa19.3■□□□□ 0.68
SMIM12-206ENST00000521580 ZFYVE16Q7Z3T8 1539 aa19.3■□□□□ 0.68
SMIM12-206ENST00000521580 ABCA9Q8IUA7 1624 aa19.3■□□□□ 0.68
SMIM12-206ENST00000521580 KIF3BO15066 747 aa19.3■□□□□ 0.68
SMIM12-206ENST00000521580 MAGI2Q86UL8 1455 aa19.29■□□□□ 0.68
SMIM12-206ENST00000521580 MRS2Q9HD23 443 aa19.29■□□□□ 0.68
SMIM12-206ENST00000521580 NBPF1Q3BBV0 1214 aa19.27■□□□□ 0.68
SMIM12-206ENST00000521580 PRAG1Q86YV5 1406 aa19.27■□□□□ 0.68
SMIM12-206ENST00000521580 BCORL1Q5H9F3 1711 aa19.27■□□□□ 0.68
SMIM12-206ENST00000521580 ARID4BQ4LE39 1312 aaPredicted RBP19.26■□□□□ 0.67
SMIM12-206ENST00000521580 A2MP01023 1474 aa19.26■□□□□ 0.67
SMIM12-206ENST00000521580 FAM9BQ8IZU0 186 aa19.26■□□□□ 0.67
SMIM12-206ENST00000521580 ATP7AQ04656 1500 aa19.26■□□□□ 0.67
SMIM12-206ENST00000521580 KANK1Q14678 1352 aa19.25■□□□□ 0.67
SMIM12-206ENST00000521580 POLR1AO95602 1720 aaPredicted RBP19.23■□□□□ 0.67
SMIM12-206ENST00000521580 ATP10AO60312 1499 aa19.23■□□□□ 0.67
SMIM12-206ENST00000521580 CD109Q6YHK3 1445 aa19.21■□□□□ 0.67
SMIM12-206ENST00000521580 DHX29Q7Z478 1369 aaKnown RBP19.21■□□□□ 0.67
SMIM12-206ENST00000521580 INO80Q9ULG1 1556 aaPredicted RBP19.19■□□□□ 0.66
SMIM12-206ENST00000521580 FKBP8Q14318 412 aa19.19■□□□□ 0.66
SMIM12-206ENST00000521580 NEFLP07196 543 aa19.19■□□□□ 0.66
SMIM12-206ENST00000521580 BCANQ96GW7 911 aa19.17■□□□□ 0.66
SMIM12-206ENST00000521580 TRPM1Q7Z4N2 1603 aa19.16■□□□□ 0.66
SMIM12-206ENST00000521580 E9PCH4 1651 aa19.16■□□□□ 0.66
SMIM12-206ENST00000521580 ZNF518AQ6AHZ1 1483 aa19.15■□□□□ 0.66
SMIM12-206ENST00000521580 GPRASP1Q5JY77 1395 aa19.15■□□□□ 0.66
SMIM12-206ENST00000521580 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
SMIM12-206ENST00000521580 PTPRTO14522 1441 aa19.12■□□□□ 0.65
SMIM12-206ENST00000521580 CYB5RLQ6IPT4 315 aa19.12■□□□□ 0.65
SMIM12-206ENST00000521580 DEPDC5O75140 1603 aa19.12■□□□□ 0.65
SMIM12-206ENST00000521580 TRPM2O94759 1503 aa19.11■□□□□ 0.65
SMIM12-206ENST00000521580 GGT6Q6P531 493 aa19.1■□□□□ 0.65
SMIM12-206ENST00000521580 EIF2AK4Q9P2K8 1649 aaKnown RBP19.1■□□□□ 0.65
SMIM12-206ENST00000521580 TET3O43151 1660 aa19.09■□□□□ 0.65
SMIM12-206ENST00000521580 RAPGEF3O95398 923 aa19.09■□□□□ 0.65
SMIM12-206ENST00000521580 POGZQ7Z3K3 1410 aa19.09■□□□□ 0.65
SMIM12-206ENST00000521580 KIDINS220Q9ULH0 1771 aa19.08■□□□□ 0.65
SMIM12-206ENST00000521580 TESK2Q96S53 571 aa19.08■□□□□ 0.65
SMIM12-206ENST00000521580 TMC1Q8TDI8 760 aa19.08■□□□□ 0.64
SMIM12-206ENST00000521580 VWDEQ8N2E2 1590 aa19.07■□□□□ 0.64
SMIM12-206ENST00000521580 TMF1P82094 1093 aa19.07■□□□□ 0.64
SMIM12-206ENST00000521580 SPHKAPQ2M3C7 1700 aa19.07■□□□□ 0.64
SMIM12-206ENST00000521580 CLTCL1P53675 1640 aa19.06■□□□□ 0.64
SMIM12-206ENST00000521580 PRDM15P57071 1507 aaPredicted RBP19.06■□□□□ 0.64
SMIM12-206ENST00000521580 DISP3Q9P2K9 1392 aa19.06■□□□□ 0.64
SMIM12-206ENST00000521580 CHGAP10645 457 aaKnown RBP19.05■□□□□ 0.64
SMIM12-206ENST00000521580 STAC3Q96MF2 364 aa19.05■□□□□ 0.64
SMIM12-206ENST00000521580 CFAP74Q9C0B2 1584 aa19.04■□□□□ 0.64
SMIM12-206ENST00000521580 MROH1Q8NDA8 1641 aa19.04■□□□□ 0.64
SMIM12-206ENST00000521580 RALBP1Q15311 655 aa19.03■□□□□ 0.64
SMIM12-206ENST00000521580 ZBED9Q6R2W3 1325 aa19.03■□□□□ 0.64
SMIM12-206ENST00000521580 MLH3Q9UHC1 1453 aa19.02■□□□□ 0.64
SMIM12-206ENST00000521580 LAMC1P11047 1609 aa19.02■□□□□ 0.64
SMIM12-206ENST00000521580 COL17A1Q9UMD9 1497 aaPredicted RBP19.02■□□□□ 0.64
SMIM12-206ENST00000521580 UGGT1Q9NYU2 1555 aa19.02■□□□□ 0.63
SMIM12-206ENST00000521580 WASHC2CQ9Y4E1 1318 aa19.01■□□□□ 0.63
SMIM12-206ENST00000521580 MYBBP1AQ9BQG0 1328 aaKnown RBP19.01■□□□□ 0.63
SMIM12-206ENST00000521580 CEP152O94986 1710 aa19■□□□□ 0.63
SMIM12-206ENST00000521580 PANK3Q9H999 370 aa19■□□□□ 0.63
SMIM12-206ENST00000521580 MADDQ8WXG6 1647 aa19■□□□□ 0.63
SMIM12-206ENST00000521580 SENP3-EIF4A1A0A087X0R7 540 aa18.99■□□□□ 0.63
SMIM12-206ENST00000521580 EFCAB6Q5THR3 1501 aa18.99■□□□□ 0.63
SMIM12-206ENST00000521580 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
SMIM12-206ENST00000521580 NEO1Q92859 1461 aa18.99■□□□□ 0.63
SMIM12-206ENST00000521580 PNISRQ8TF01 805 aaKnown RBP18.98■□□□□ 0.63
SMIM12-206ENST00000521580 HECW2Q9P2P5 1572 aa18.98■□□□□ 0.63
SMIM12-206ENST00000521580 IRX6P78412 446 aaPredicted RBP18.98■□□□□ 0.63
SMIM12-206ENST00000521580 CC2D1BQ5T0F9 858 aaKnown RBP18.98■□□□□ 0.63
SMIM12-206ENST00000521580 CFAP70Q5T0N1 1121 aa18.98■□□□□ 0.63
SMIM12-206ENST00000521580 ADGRF5Q8IZF2 1346 aa18.97■□□□□ 0.63
SMIM12-206ENST00000521580 PER1O15534 1290 aaPredicted RBP18.97■□□□□ 0.63
SMIM12-206ENST00000521580 PPRC1Q5VV67 1664 aaKnown RBP18.96■□□□□ 0.63
SMIM12-206ENST00000521580 RNF17Q9BXT8 1623 aaKnown RBP18.96■□□□□ 0.63
SMIM12-206ENST00000521580 SCAF11Q99590 1463 aaKnown RBP18.95■□□□□ 0.62
SMIM12-206ENST00000521580 FRMPD1Q5SYB0 1578 aa18.95■□□□□ 0.62
SMIM12-206ENST00000521580 BRD4O60885 1362 aaPredicted RBP18.95■□□□□ 0.62
SMIM12-206ENST00000521580 LMTK2Q8IWU2 1503 aa18.94■□□□□ 0.62
SMIM12-206ENST00000521580 NPATQ14207 1427 aa18.94■□□□□ 0.62
SMIM12-206ENST00000521580 FAM69CQ0P6D2 419 aa18.93■□□□□ 0.62
SMIM12-206ENST00000521580 NLRP13Q86W25 1043 aa18.93■□□□□ 0.62
SMIM12-206ENST00000521580 CDCA8Q53HL2 280 aa18.93■□□□□ 0.62
SMIM12-206ENST00000521580 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
SMIM12-206ENST00000521580 EIF3AQ14152 1382 aaKnown RBP18.92■□□□□ 0.62
SMIM12-206ENST00000521580 PARD3Q8TEW0 1356 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms