RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 FAM135AQ9P2D6 1515 aa26.13■■□□□ 1.77
TRAM1-203ENST00000520700 KDM4FA0A1W2PPD8 638 aa26.12■■□□□ 1.77
TRAM1-203ENST00000520700 GCC2Q8IWJ2 1684 aa26.12■■□□□ 1.77
TRAM1-203ENST00000520700 HRCP23327 699 aa26.1■■□□□ 1.77
TRAM1-203ENST00000520700 SETD5Q9C0A6 1442 aa26.1■■□□□ 1.77
TRAM1-203ENST00000520700 CNTLNQ9NXG0 1405 aa26.09■■□□□ 1.77
TRAM1-203ENST00000520700 DEPDC5O75140 1603 aa26.09■■□□□ 1.77
TRAM1-203ENST00000520700 KDM5DQ9BY66 1539 aa26.08■■□□□ 1.77
TRAM1-203ENST00000520700 MROH1Q8NDA8 1641 aa26.07■■□□□ 1.76
TRAM1-203ENST00000520700 PRDM15P57071 1507 aaPredicted RBP26.07■■□□□ 1.76
TRAM1-203ENST00000520700 ESF1Q9H501 851 aaKnown RBP26.05■■□□□ 1.76
TRAM1-203ENST00000520700 WASHC2CQ9Y4E1 1318 aa26.05■■□□□ 1.76
TRAM1-203ENST00000520700 KANK1Q14678 1352 aa26.05■■□□□ 1.76
TRAM1-203ENST00000520700 VWDEQ8N2E2 1590 aa26.04■■□□□ 1.76
TRAM1-203ENST00000520700 UNC13BO14795 1591 aa26.03■■□□□ 1.76
TRAM1-203ENST00000520700 MADDQ8WXG6 1647 aa26.01■■□□□ 1.75
TRAM1-203ENST00000520700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.01■■□□□ 1.753e-7■■□□□ 12.8
TRAM1-203ENST00000520700 LMTK2Q8IWU2 1503 aa26■■□□□ 1.75
TRAM1-203ENST00000520700 ABCC3O15438 1527 aa25.98■■□□□ 1.75
TRAM1-203ENST00000520700 NUP155O75694 1391 aa25.98■■□□□ 1.75
TRAM1-203ENST00000520700 ZMYM3Q14202 1370 aa25.98■■□□□ 1.75
TRAM1-203ENST00000520700 RAB3GAP2Q9H2M9 1393 aa25.98■■□□□ 1.75
TRAM1-203ENST00000520700 FER1L4A9Z1Z3 1794 aa25.98■■□□□ 1.75
TRAM1-203ENST00000520700 ZC3H13Q5T200 1668 aaKnown RBP25.96■■□□□ 1.75
TRAM1-203ENST00000520700 PTPRMP28827 1452 aa25.96■■□□□ 1.75
TRAM1-203ENST00000520700 MROH2AA6NES4 1674 aa25.96■■□□□ 1.75
TRAM1-203ENST00000520700 ARHGAP31Q2M1Z3 1444 aa25.96■■□□□ 1.75
TRAM1-203ENST00000520700 IQGAP3Q86VI3 1631 aa25.92■■□□□ 1.74
TRAM1-203ENST00000520700 CLTCQ00610 1675 aaKnown RBP25.92■■□□□ 1.74
TRAM1-203ENST00000520700 RIMS1Q86UR5 1692 aaKnown RBP25.92■■□□□ 1.74
TRAM1-203ENST00000520700 TRIM52Q96A61 297 aa25.91■■□□□ 1.74
TRAM1-203ENST00000520700 PZPP20742 1482 aa25.88■■□□□ 1.73
TRAM1-203ENST00000520700 CEBPAP49715 358 aaPredicted RBP25.86■■□□□ 1.73
TRAM1-203ENST00000520700 NPATQ14207 1427 aa25.86■■□□□ 1.73
TRAM1-203ENST00000520700 CEP152O94986 1710 aa25.85■■□□□ 1.73
TRAM1-203ENST00000520700 RPRD2Q5VT52 1461 aaKnown RBP25.85■■□□□ 1.73
TRAM1-203ENST00000520700 TET3O43151 1660 aa25.85■■□□□ 1.73
TRAM1-203ENST00000520700 PCGF6Q9BYE7 350 aa25.85■■□□□ 1.73
TRAM1-203ENST00000520700 CAMSAP1Q5T5Y3 1602 aa25.85■■□□□ 1.73
TRAM1-203ENST00000520700 EFCAB6Q5THR3 1501 aa25.84■■□□□ 1.73
TRAM1-203ENST00000520700 C3P01024 1663 aa25.83■■□□□ 1.73
TRAM1-203ENST00000520700 MPHOSPH9Q99550 1183 aa25.83■■□□□ 1.73
TRAM1-203ENST00000520700 SLC4A1APQ9BWU0 796 aaKnown RBP25.82■■□□□ 1.72
TRAM1-203ENST00000520700 FBXO31Q5XUX0 539 aaPredicted RBP25.8■■□□□ 1.72
TRAM1-203ENST00000520700 SETD1BQ9UPS6 1966 aaKnown RBP25.78■■□□□ 1.72
TRAM1-203ENST00000520700 PKD2Q13563 968 aa25.77■■□□□ 1.72
TRAM1-203ENST00000520700 NOS1P29475 1434 aa25.77■■□□□ 1.72
TRAM1-203ENST00000520700 SPATA31D1Q6ZQQ2 1576 aa25.77■■□□□ 1.72
TRAM1-203ENST00000520700 ERVK-7P63135 1459 aa25.76■■□□□ 1.71
TRAM1-203ENST00000520700 E9PCH4 1651 aa25.74■■□□□ 1.71
TRAM1-203ENST00000520700 PTPRTO14522 1441 aa25.73■■□□□ 1.71
TRAM1-203ENST00000520700 TNRQ92752 1358 aa25.73■■□□□ 1.71
TRAM1-203ENST00000520700 PLPPR3Q6T4P5 718 aa25.71■■□□□ 1.71
TRAM1-203ENST00000520700 SLC52A1Q9NWF4 448 aa25.7■■□□□ 1.7
TRAM1-203ENST00000520700 PREX1Q8TCU6 1659 aa25.7■■□□□ 1.7
TRAM1-203ENST00000520700 NLRP1Q9C000 1473 aa25.67■■□□□ 1.7
TRAM1-203ENST00000520700 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
TRAM1-203ENST00000520700 PLA2R1Q13018 1463 aa25.66■■□□□ 1.7
TRAM1-203ENST00000520700 CFAP65Q6ZU64 1925 aaKnown RBP25.64■■□□□ 1.69
TRAM1-203ENST00000520700 IDI1Q13907 227 aa25.63■■□□□ 1.69
TRAM1-203ENST00000520700 SYNMO15061 1565 aa25.63■■□□□ 1.69
TRAM1-203ENST00000520700 UHRF1BP1Q6BDS2 1440 aa25.63■■□□□ 1.69
TRAM1-203ENST00000520700 FOXD1Q16676 465 aa25.61■■□□□ 1.69
TRAM1-203ENST00000520700 A2ML1A8K2U0 1454 aa25.6■■□□□ 1.69
TRAM1-203ENST00000520700 TRPM2O94759 1503 aa25.6■■□□□ 1.69
TRAM1-203ENST00000520700 DHX57Q6P158 1386 aaKnown RBP25.59■■□□□ 1.69
TRAM1-203ENST00000520700 ANKRD30BQ9BXX2 1392 aa25.59■■□□□ 1.69
TRAM1-203ENST00000520700 SPHKAPQ2M3C7 1700 aa25.58■■□□□ 1.69
TRAM1-203ENST00000520700 PIK3C2BO00750 1634 aa25.57■■□□□ 1.68
TRAM1-203ENST00000520700 MYO3AQ8NEV4 1616 aa25.57■■□□□ 1.68
TRAM1-203ENST00000520700 LMTK3Q96Q04 1460 aa25.55■■□□□ 1.68
TRAM1-203ENST00000520700 CEP170BQ9Y4F5 1589 aaPredicted RBP25.54■■□□□ 1.68
TRAM1-203ENST00000520700 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
TRAM1-203ENST00000520700 ZNF142P52746 1687 aaPredicted RBP25.54■■□□□ 1.68
TRAM1-203ENST00000520700 KDM5AP29375 1690 aaKnown RBP25.52■■□□□ 1.68
TRAM1-203ENST00000520700 CCDC144AA2RUR9 1427 aa25.5■■□□□ 1.67
TRAM1-203ENST00000520700 UGGT1Q9NYU2 1555 aa25.5■■□□□ 1.67
TRAM1-203ENST00000520700 CLTCL1P53675 1640 aa25.48■■□□□ 1.67
TRAM1-203ENST00000520700 STAG3Q9UJ98 1225 aa25.47■■□□□ 1.67
TRAM1-203ENST00000520700 ADGRB3O60242 1522 aa25.46■■□□□ 1.67
TRAM1-203ENST00000520700 UBR1Q8IWV7 1749 aa25.45■■□□□ 1.66
TRAM1-203ENST00000520700 TMEM131LA2VDJ0 1609 aa25.45■■□□□ 1.66
TRAM1-203ENST00000520700 NEURL4Q96JN8 1562 aa25.44■■□□□ 1.66
TRAM1-203ENST00000520700 CLSPNQ9HAW4 1339 aa25.42■■□□□ 1.66
TRAM1-203ENST00000520700 ARHGAP23Q9P227 1491 aa25.42■■□□□ 1.66
TRAM1-203ENST00000520700 TMEM2Q9UHN6 1383 aa25.42■■□□□ 1.66
TRAM1-203ENST00000520700 SLIT1O75093 1534 aa25.42■■□□□ 1.66
TRAM1-203ENST00000520700 SPATA31E1Q6ZUB1 1445 aa25.41■■□□□ 1.66
TRAM1-203ENST00000520700 HSPA2P54652 639 aa25.41■■□□□ 1.66
TRAM1-203ENST00000520700 CHGAP10645 457 aaKnown RBP25.4■■□□□ 1.66
TRAM1-203ENST00000520700 RPGRIP1LQ68CZ1 1315 aa25.39■■□□□ 1.66
TRAM1-203ENST00000520700 HDGFP51858 240 aaKnown RBP25.39■■□□□ 1.66
TRAM1-203ENST00000520700 KIF1BO60333 1816 aa25.37■■□□□ 1.65
TRAM1-203ENST00000520700 ANKLE2Q86XL3 938 aa25.37■■□□□ 1.65
TRAM1-203ENST00000520700 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.36■■□□□ 1.65
TRAM1-203ENST00000520700 ZFYVE9O95405 1425 aa25.35■■□□□ 1.65
TRAM1-203ENST00000520700 EID1Q9Y6B2 187 aa25.34■■□□□ 1.65
TRAM1-203ENST00000520700 RIMS2Q9UQ26 1411 aa25.33■■□□□ 1.65
TRAM1-203ENST00000520700 LTKP29376 864 aa25.32■■□□□ 1.64
TRAM1-203ENST00000520700 ZNF326Q5BKZ1 582 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms