RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 TRIM26Q12899 539 aaPredicted RBP8.05□□□□□ -1.12
SDC2-204ENST00000519914 CADPS2Q86UW7 1296 aa8.05□□□□□ -1.12
SDC2-204ENST00000519914 PTPREP23469 700 aa8.04□□□□□ -1.12
SDC2-204ENST00000519914 PTPN5P54829 565 aa8.04□□□□□ -1.12
SDC2-204ENST00000519914 PCGF6Q9BYE7 350 aa8.04□□□□□ -1.12
SDC2-204ENST00000519914 BCL2L12Q9HB09 334 aa8.04□□□□□ -1.12
SDC2-204ENST00000519914 ANO8Q9HCE9 1232 aaPredicted RBP8.03□□□□□ -1.12
SDC2-204ENST00000519914 EMILIN3Q9NT22 766 aa8.03□□□□□ -1.12
SDC2-204ENST00000519914 EEA1Q15075 1411 aa8.03□□□□□ -1.12
SDC2-204ENST00000519914 ZDHHC16Q969W1 377 aa8.03□□□□□ -1.12
SDC2-204ENST00000519914 ADAM33Q9BZ11 813 aa8.03□□□□□ -1.12
SDC2-204ENST00000519914 MFSD10Q14728 455 aa8.02□□□□□ -1.13
SDC2-204ENST00000519914 JPH4Q96JJ6 628 aa8.02□□□□□ -1.13
SDC2-204ENST00000519914 ATAD2BQ9ULI0 1458 aa8.01□□□□□ -1.13
SDC2-204ENST00000519914 GOLGA8CPA6NN73 597 aa8.01□□□□□ -1.13
SDC2-204ENST00000519914 ZBED2Q9BTP6 218 aa7.99□□□□□ -1.13
SDC2-204ENST00000519914 ABCC8Q09428 1581 aa7.98□□□□□ -1.13
SDC2-204ENST00000519914 WRNQ14191 1432 aaPredicted RBP eCLIP7.98□□□□□ -1.13
SDC2-204ENST00000519914 MRPL50Q8N5N7 158 aaKnown RBP7.98□□□□□ -1.13
SDC2-204ENST00000519914 SLC4A5Q9BY07 1137 aa7.97□□□□□ -1.13
SDC2-204ENST00000519914 PCDHGA10Q9Y5H3 936 aa7.97□□□□□ -1.13
SDC2-204ENST00000519914 BHMG1C9JSJ3 638 aaPredicted RBP7.96□□□□□ -1.14
SDC2-204ENST00000519914 WNT2BQ93097 391 aa7.96□□□□□ -1.14
SDC2-204ENST00000519914 HMGXB3Q12766 1538 aa7.96□□□□□ -1.14
SDC2-204ENST00000519914 PROX2Q3B8N5 592 aa7.95□□□□□ -1.14
SDC2-204ENST00000519914 BAZ1BQ9UIG0 1483 aaKnown RBP7.94□□□□□ -1.14
SDC2-204ENST00000519914 TNIKQ9UKE5 1360 aa7.94□□□□□ -1.14
SDC2-204ENST00000519914 DPYSL4O14531 572 aa7.94□□□□□ -1.14
SDC2-204ENST00000519914 COL9A1P20849 921 aa7.94□□□□□ -1.14
SDC2-204ENST00000519914 THSD4Q6ZMP0 1018 aa7.94□□□□□ -1.14
SDC2-204ENST00000519914 KIF21BO75037 1637 aa7.92□□□□□ -1.14
SDC2-204ENST00000519914 ZEB1P37275 1124 aaPredicted RBP7.92□□□□□ -1.14
SDC2-204ENST00000519914 TYW1BQ6NUM6 668 aa7.92□□□□□ -1.14
SDC2-204ENST00000519914 RBM33Q96EV2 1170 aaKnown RBP7.92□□□□□ -1.14
SDC2-204ENST00000519914 NBPF3Q9H094 633 aa7.92□□□□□ -1.14
SDC2-204ENST00000519914 NCAPD3P42695 1498 aa7.91□□□□□ -1.14
SDC2-204ENST00000519914 PHF14O94880 888 aa7.91□□□□□ -1.14
SDC2-204ENST00000519914 FAM9AQ8IZU1 332 aaPredicted RBP7.91□□□□□ -1.14
SDC2-204ENST00000519914 BBXQ8WY36 941 aaPredicted RBP7.91□□□□□ -1.14
SDC2-204ENST00000519914 SYNJ1O43426 1573 aa7.91□□□□□ -1.14
SDC2-204ENST00000519914 BIVM-ERCC5R4GMW8 1640 aa7.9□□□□□ -1.14
SDC2-204ENST00000519914 SOGA1O94964 1423 aa7.9□□□□□ -1.14
SDC2-204ENST00000519914 PPP1R3GB7ZBB8 358 aa7.9□□□□□ -1.14
SDC2-204ENST00000519914 DDX12PQ92771 950 aa7.9□□□□□ -1.14
SDC2-204ENST00000519914 GOLGA3Q08378 1498 aa7.89□□□□□ -1.15
SDC2-204ENST00000519914 FBXW7Q969H0 707 aa7.89□□□□□ -1.15
SDC2-204ENST00000519914 TOP2BQ02880 1626 aa7.89□□□□□ -1.15
SDC2-204ENST00000519914 CAMK2BQ13554 666 aa7.88□□□□□ -1.15
SDC2-204ENST00000519914 C6orf132Q5T0Z8 1188 aa7.88□□□□□ -1.15
SDC2-204ENST00000519914 KIAA1468Q9P260 1216 aa7.88□□□□□ -1.15
SDC2-204ENST00000519914 RABGEF1Q9UJ41 708 aa7.88□□□□□ -1.15
SDC2-204ENST00000519914 CEP162Q5TB80 1403 aa7.88□□□□□ -1.15
SDC2-204ENST00000519914 CEP164Q9UPV0 1460 aa7.87□□□□□ -1.15
SDC2-204ENST00000519914 PRDM2Q13029 1718 aa7.87□□□□□ -1.15
SDC2-204ENST00000519914 BCAMP50895 628 aa7.86□□□□□ -1.15
SDC2-204ENST00000519914 SPRYD3Q8NCJ5 442 aa7.86□□□□□ -1.15
SDC2-204ENST00000519914 ANKK1Q8NFD2 765 aa7.86□□□□□ -1.15
SDC2-204ENST00000519914 RUSC2Q8N2Y8 1516 aa7.85□□□□□ -1.15
SDC2-204ENST00000519914 CFAP44Q96MT7 982 aa7.85□□□□□ -1.15
SDC2-204ENST00000519914 EPAS1Q99814 870 aa7.85□□□□□ -1.15
SDC2-204ENST00000519914 SEPT9Q9UHD8 586 aaPredicted RBP7.85□□□□□ -1.15
SDC2-204ENST00000519914 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.84□□□□□ -1.15
SDC2-204ENST00000519914 NBR1Q14596 966 aa7.82□□□□□ -1.16
SDC2-204ENST00000519914 PAXIP1Q6ZW49 1069 aaPredicted RBP7.82□□□□□ -1.16
SDC2-204ENST00000519914 ZFRQ96KR1 1074 aaKnown RBP7.82□□□□□ -1.16
SDC2-204ENST00000519914 ERICH3Q5RHP9 1530 aa7.82□□□□□ -1.16
SDC2-204ENST00000519914 MAP3K7O43318 606 aa7.81□□□□□ -1.16
SDC2-204ENST00000519914 TSR1Q2NL82 804 aaKnown RBP7.81□□□□□ -1.16
SDC2-204ENST00000519914 PPARGC1BQ86YN6 1023 aaKnown RBP7.81□□□□□ -1.16
SDC2-204ENST00000519914 CFTRP13569 1480 aa7.81□□□□□ -1.16
SDC2-204ENST00000519914 TRIM6-TRIM34B2RNG4 842 aa7.8□□□□□ -1.16
SDC2-204ENST00000519914 SOWAHBA6NEL2 793 aa7.79□□□□□ -1.16
SDC2-204ENST00000519914 GRXCR2A6NFK2 248 aa7.79□□□□□ -1.16
SDC2-204ENST00000519914 LAPTM4BQ86VI4 370 aa7.79□□□□□ -1.16
SDC2-204ENST00000519914 WBP1LQ9NX94 342 aa7.79□□□□□ -1.16
SDC2-204ENST00000519914 TTBK1Q5TCY1 1321 aaPredicted RBP7.79□□□□□ -1.16
SDC2-204ENST00000519914 RTN4Q9NQC3 1192 aaKnown RBP7.78□□□□□ -1.16
SDC2-204ENST00000519914 WDR70Q9NW82 654 aa7.78□□□□□ -1.16
SDC2-204ENST00000519914 PRXQ9BXM0 1461 aa7.78□□□□□ -1.16
SDC2-204ENST00000519914 A0A0G2JS52 829 aa7.78□□□□□ -1.16
SDC2-204ENST00000519914 ONECUT3O60422 494 aaPredicted RBP7.78□□□□□ -1.16
SDC2-204ENST00000519914 EN1Q05925 392 aaPredicted RBP7.78□□□□□ -1.16
SDC2-204ENST00000519914 E2F4Q16254 413 aa7.78□□□□□ -1.16
SDC2-204ENST00000519914 PDIA6Q15084 440 aa7.77□□□□□ -1.17
SDC2-204ENST00000519914 AMER1Q5JTC6 1135 aaPredicted RBP7.77□□□□□ -1.17
SDC2-204ENST00000519914 IFFO2Q5TF58 517 aa7.77□□□□□ -1.17
SDC2-204ENST00000519914 TSKSQ9UJT2 592 aa7.77□□□□□ -1.17
SDC2-204ENST00000519914 CUX1P39880 1505 aa7.76□□□□□ -1.17
SDC2-204ENST00000519914 VPS8Q8N3P4 1428 aa7.76□□□□□ -1.17
SDC2-204ENST00000519914 SMAPO00193 183 aa7.76□□□□□ -1.17
SDC2-204ENST00000519914 FAM98CQ17RN3 349 aaKnown RBP7.76□□□□□ -1.17
SDC2-204ENST00000519914 PACS2Q86VP3 889 aa7.76□□□□□ -1.17
SDC2-204ENST00000519914 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.76□□□□□ -1.17
SDC2-204ENST00000519914 SPDYE16A6NNV3 312 aaPredicted RBP7.75□□□□□ -1.17
SDC2-204ENST00000519914 PRIM1P49642 420 aaKnown RBP7.75□□□□□ -1.17
SDC2-204ENST00000519914 LRCH3Q96II8 777 aa7.75□□□□□ -1.17
SDC2-204ENST00000519914 HPS5Q9UPZ3 1129 aa7.75□□□□□ -1.17
SDC2-204ENST00000519914 RAPGEF2Q9Y4G8 1499 aa7.74□□□□□ -1.17
SDC2-204ENST00000519914 CLIP1P30622 1438 aa7.74□□□□□ -1.17
SDC2-204ENST00000519914 CDCA7LQ96GN5 454 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms