RNA–Protein interactions for RNA: ENST00000518098.1

LINCR-0001-202, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 524 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-202ENST00000518098 GPATCH8Q9UKJ3 1502 aaKnown RBP9.7□□□□□ -0.86
LINCR-0001-202ENST00000518098 NPHP4O75161 1426 aaPredicted RBP9.69□□□□□ -0.86
LINCR-0001-202ENST00000518098 PZPP20742 1482 aa9.69□□□□□ -0.86
LINCR-0001-202ENST00000518098 MIA2Q96PC5 1412 aa9.69□□□□□ -0.86
LINCR-0001-202ENST00000518098 FYCO1Q9BQS8 1478 aa9.69□□□□□ -0.86
LINCR-0001-202ENST00000518098 DNMT1P26358 1616 aaKnown RBP9.68□□□□□ -0.86
LINCR-0001-202ENST00000518098 SYCP2Q9BX26 1530 aa9.67□□□□□ -0.86
LINCR-0001-202ENST00000518098 CLTCQ00610 1675 aaKnown RBP9.67□□□□□ -0.86
LINCR-0001-202ENST00000518098 DEPDC5O75140 1603 aa9.67□□□□□ -0.86
LINCR-0001-202ENST00000518098 INO80Q9ULG1 1556 aaPredicted RBP9.67□□□□□ -0.86
LINCR-0001-202ENST00000518098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.66□□□□□ -0.86
LINCR-0001-202ENST00000518098 SUPT6HQ7KZ85 1726 aaKnown RBP9.66□□□□□ -0.86
LINCR-0001-202ENST00000518098 KDM5DQ9BY66 1539 aa9.66□□□□□ -0.86
LINCR-0001-202ENST00000518098 MTUS2Q5JR59 1369 aa9.65□□□□□ -0.86
LINCR-0001-202ENST00000518098 ADGBQ8N7X0 1667 aa9.65□□□□□ -0.86
LINCR-0001-202ENST00000518098 KIF3BO15066 747 aa9.65□□□□□ -0.86
LINCR-0001-202ENST00000518098 TSPY4P0CV99 314 aa9.65□□□□□ -0.86
LINCR-0001-202ENST00000518098 TSPY10P0CW01 314 aa9.65□□□□□ -0.86
LINCR-0001-202ENST00000518098 EID1Q9Y6B2 187 aa9.65□□□□□ -0.86
LINCR-0001-202ENST00000518098 UGGT1Q9NYU2 1555 aa9.65□□□□□ -0.86
LINCR-0001-202ENST00000518098 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.87
LINCR-0001-202ENST00000518098 SYNMO15061 1565 aa9.64□□□□□ -0.87
LINCR-0001-202ENST00000518098 VWDEQ8N2E2 1590 aa9.63□□□□□ -0.87
LINCR-0001-202ENST00000518098 POLR1AO95602 1720 aaPredicted RBP9.63□□□□□ -0.87
LINCR-0001-202ENST00000518098 RNF17Q9BXT8 1623 aaKnown RBP9.63□□□□□ -0.87
LINCR-0001-202ENST00000518098 NEURL4Q96JN8 1562 aa9.63□□□□□ -0.87
LINCR-0001-202ENST00000518098 CDC42BPAQ5VT25 1732 aa9.62□□□□□ -0.87
LINCR-0001-202ENST00000518098 LRRC7Q96NW7 1537 aa9.62□□□□□ -0.87
LINCR-0001-202ENST00000518098 FBXO31Q5XUX0 539 aaPredicted RBP9.62□□□□□ -0.87
LINCR-0001-202ENST00000518098 MBD5Q9P267 1494 aa9.6□□□□□ -0.87
LINCR-0001-202ENST00000518098 CCDC141Q6ZP82 1450 aa9.59□□□□□ -0.87
LINCR-0001-202ENST00000518098 LRRC9Q6ZRR7 1453 aa9.59□□□□□ -0.87
LINCR-0001-202ENST00000518098 RGS17Q9UGC6 210 aaPredicted RBP9.59□□□□□ -0.87
LINCR-0001-202ENST00000518098 ZNF772Q68DY9 489 aaPredicted RBP9.58□□□□□ -0.88
LINCR-0001-202ENST00000518098 SCAF11Q99590 1463 aaKnown RBP9.58□□□□□ -0.88
LINCR-0001-202ENST00000518098 IQGAP1P46940 1657 aa9.58□□□□□ -0.88
LINCR-0001-202ENST00000518098 CEP162Q5TB80 1403 aa9.57□□□□□ -0.88
LINCR-0001-202ENST00000518098 TXNDC2Q86VQ3 553 aa9.57□□□□□ -0.88
LINCR-0001-202ENST00000518098 HDGFP51858 240 aaKnown RBP9.56□□□□□ -0.88
LINCR-0001-202ENST00000518098 JCADQ9P266 1359 aa9.55□□□□□ -0.88
LINCR-0001-202ENST00000518098 KCNA6P17658 529 aa9.55□□□□□ -0.88
LINCR-0001-202ENST00000518098 STAG3Q9UJ98 1225 aa9.55□□□□□ -0.88
LINCR-0001-202ENST00000518098 ALKQ9UM73 1620 aa9.55□□□□□ -0.88
LINCR-0001-202ENST00000518098 EHBP1L1Q8N3D4 1523 aa9.55□□□□□ -0.88
LINCR-0001-202ENST00000518098 SPATA31A6Q5VVP1 1343 aa9.55□□□□□ -0.88
LINCR-0001-202ENST00000518098 POTEAQ6S8J7 498 aa9.54□□□□□ -0.88
LINCR-0001-202ENST00000518098 EHMT2Q96KQ7 1210 aa9.54□□□□□ -0.88
LINCR-0001-202ENST00000518098 ARHGAP31Q2M1Z3 1444 aa9.54□□□□□ -0.88
LINCR-0001-202ENST00000518098 SLIT1O75093 1534 aa9.53□□□□□ -0.88
LINCR-0001-202ENST00000518098 ZC3H13Q5T200 1668 aaKnown RBP9.53□□□□□ -0.88
LINCR-0001-202ENST00000518098 LRRIQ1Q96JM4 1722 aa9.53□□□□□ -0.88
LINCR-0001-202ENST00000518098 ZNF644Q9H582 1327 aaPredicted RBP9.53□□□□□ -0.88
LINCR-0001-202ENST00000518098 ERVK-7P63135 1459 aa9.53□□□□□ -0.88
LINCR-0001-202ENST00000518098 ARHGAP23Q9P227 1491 aa9.53□□□□□ -0.88
LINCR-0001-202ENST00000518098 MSH6P52701 1360 aa9.52□□□□□ -0.88
LINCR-0001-202ENST00000518098 NCOA3Q9Y6Q9 1424 aa9.52□□□□□ -0.89
LINCR-0001-202ENST00000518098 ABCC3O15438 1527 aa9.51□□□□□ -0.89
LINCR-0001-202ENST00000518098 TMEM94Q12767 1356 aa9.51□□□□□ -0.89
LINCR-0001-202ENST00000518098 TMEM2Q9UHN6 1383 aa9.51□□□□□ -0.89
LINCR-0001-202ENST00000518098 FGD6Q6ZV73 1430 aa9.51□□□□□ -0.89
LINCR-0001-202ENST00000518098 PROSER2Q86WR7 435 aaPredicted RBP9.51□□□□□ -0.89
LINCR-0001-202ENST00000518098 KANK1Q14678 1352 aa9.5□□□□□ -0.89
LINCR-0001-202ENST00000518098 ARHGEF5Q12774 1597 aa9.5□□□□□ -0.89
LINCR-0001-202ENST00000518098 MEX3CQ5U5Q3 659 aaKnown RBP9.5□□□□□ -0.89
LINCR-0001-202ENST00000518098 SLAIN2Q9P270 581 aa9.5□□□□□ -0.89
LINCR-0001-202ENST00000518098 NKTRP30414 1462 aaKnown RBP9.5□□□□□ -0.89
LINCR-0001-202ENST00000518098 TIAM1Q13009 1591 aa9.5□□□□□ -0.89
LINCR-0001-202ENST00000518098 CAMSAP2Q08AD1 1489 aa9.49□□□□□ -0.89
LINCR-0001-202ENST00000518098 RXRBP28702 533 aa9.49□□□□□ -0.89
LINCR-0001-202ENST00000518098 LTKP29376 864 aa9.49□□□□□ -0.89
LINCR-0001-202ENST00000518098 UPF1Q92900 1129 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINCR-0001-202ENST00000518098 SLC52A1Q9NWF4 448 aa9.49□□□□□ -0.89
LINCR-0001-202ENST00000518098 EIF2AK4Q9P2K8 1649 aaKnown RBP9.49□□□□□ -0.89
LINCR-0001-202ENST00000518098 NCOA2Q15596 1464 aa9.47□□□□□ -0.89
LINCR-0001-202ENST00000518098 CDK12Q9NYV4 1490 aaPredicted RBP9.47□□□□□ -0.89
LINCR-0001-202ENST00000518098 PRDM15P57071 1507 aaPredicted RBP9.47□□□□□ -0.89
LINCR-0001-202ENST00000518098 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
LINCR-0001-202ENST00000518098 DUOX2Q9NRD8 1548 aa9.46□□□□□ -0.9
LINCR-0001-202ENST00000518098 MAST1Q9Y2H9 1570 aa9.46□□□□□ -0.9
LINCR-0001-202ENST00000518098 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINCR-0001-202ENST00000518098 BCANQ96GW7 911 aa9.45□□□□□ -0.9
LINCR-0001-202ENST00000518098 MYOM3Q5VTT5 1437 aa9.45□□□□□ -0.9
LINCR-0001-202ENST00000518098 ERBINQ96RT1 1412 aa9.45□□□□□ -0.9
LINCR-0001-202ENST00000518098 KDM5AP29375 1690 aaKnown RBP9.45□□□□□ -0.9
LINCR-0001-202ENST00000518098 ATF3P18847 181 aa9.44□□□□□ -0.9
LINCR-0001-202ENST00000518098 C19orf44Q9H6X5 657 aa9.44□□□□□ -0.9
LINCR-0001-202ENST00000518098 UBR1Q8IWV7 1749 aa9.43□□□□□ -0.9
LINCR-0001-202ENST00000518098 EFCAB6Q5THR3 1501 aa9.43□□□□□ -0.9
LINCR-0001-202ENST00000518098 PIK3R4Q99570 1358 aa9.43□□□□□ -0.9
LINCR-0001-202ENST00000518098 NGLY1Q96IV0 654 aa9.43□□□□□ -0.9
LINCR-0001-202ENST00000518098 ROBO1Q9Y6N7 1651 aa9.42□□□□□ -0.9
LINCR-0001-202ENST00000518098 C14orf37Q86TY3 774 aa9.42□□□□□ -0.9
LINCR-0001-202ENST00000518098 TBX22Q9Y458 520 aa9.42□□□□□ -0.9
LINCR-0001-202ENST00000518098 STRCP1A6NGW2 1772 aa9.42□□□□□ -0.9
LINCR-0001-202ENST00000518098 PPP1R15AO75807 674 aaPredicted RBP9.41□□□□□ -0.9
LINCR-0001-202ENST00000518098 IDI1Q13907 227 aa9.41□□□□□ -0.9
LINCR-0001-202ENST00000518098 CCDC125Q86Z20 511 aa9.41□□□□□ -0.9
LINCR-0001-202ENST00000518098 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
LINCR-0001-202ENST00000518098 KIF15Q9NS87 1388 aa9.4□□□□□ -0.9
LINCR-0001-202ENST00000518098 PLEKHG1Q9ULL1 1385 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms