RNA–Protein interactions for RNA: ENST00000517935.1

CDH12P3-201, Transcript of cadherin 12 pseudogene 3, humanhuman

BASIC

Gene CDH12P3, Length 295 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P3-201ENST00000517935 NUP153P49790 1475 aaKnown RBP8.85□□□□□ -0.99
CDH12P3-201ENST00000517935 CDK12Q9NYV4 1490 aaPredicted RBP8.85□□□□□ -0.99
CDH12P3-201ENST00000517935 MLH3Q9UHC1 1453 aa8.85□□□□□ -0.99
CDH12P3-201ENST00000517935 SPDYE4A6NLX3 237 aa8.85□□□□□ -0.99
CDH12P3-201ENST00000517935 ZNF772Q68DY9 489 aaPredicted RBP8.85□□□□□ -0.99
CDH12P3-201ENST00000517935 ZNF692Q9BU19 519 aaPredicted RBP8.85□□□□□ -0.99
CDH12P3-201ENST00000517935 ZRANB1Q9UGI0 708 aa8.85□□□□□ -0.99
CDH12P3-201ENST00000517935 NEURL4Q96JN8 1562 aa8.85□□□□□ -0.99
CDH12P3-201ENST00000517935 A2ML1A8K2U0 1454 aa8.84□□□□□ -0.99
CDH12P3-201ENST00000517935 SYNMO15061 1565 aa8.84□□□□□ -0.99
CDH12P3-201ENST00000517935 POLR1AO95602 1720 aaPredicted RBP8.84□□□□□ -0.99
CDH12P3-201ENST00000517935 AFAP1Q8N556 730 aa8.84□□□□□ -0.99
CDH12P3-201ENST00000517935 FKBP8Q14318 412 aa8.83□□□□□ -1
CDH12P3-201ENST00000517935 ANKLE2Q86XL3 938 aa8.83□□□□□ -1
CDH12P3-201ENST00000517935 DNMT1P26358 1616 aaKnown RBP8.83□□□□□ -1
CDH12P3-201ENST00000517935 MED14O60244 1454 aa8.83□□□□□ -1
CDH12P3-201ENST00000517935 TRIM52Q96A61 297 aa8.82□□□□□ -1
CDH12P3-201ENST00000517935 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
CDH12P3-201ENST00000517935 ABCA6Q8N139 1617 aa8.81□□□□□ -1
CDH12P3-201ENST00000517935 RXRBP28702 533 aa8.81□□□□□ -1
CDH12P3-201ENST00000517935 RBM33Q96EV2 1170 aaKnown RBP8.8□□□□□ -1
CDH12P3-201ENST00000517935 DEPDC5O75140 1603 aa8.79□□□□□ -1
CDH12P3-201ENST00000517935 NPHP4O75161 1426 aaPredicted RBP8.79□□□□□ -1
CDH12P3-201ENST00000517935 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.78□□□□□ -1
CDH12P3-201ENST00000517935 JCADQ9P266 1359 aa8.78□□□□□ -1
CDH12P3-201ENST00000517935 P3H3Q8IVL6 736 aa8.78□□□□□ -1
CDH12P3-201ENST00000517935 AKT1S1Q96B36 256 aa8.78□□□□□ -1
CDH12P3-201ENST00000517935 CDK13Q14004 1512 aaKnown RBP8.78□□□□□ -1
CDH12P3-201ENST00000517935 THEMISQ8N1K5 641 aaPredicted RBP8.77□□□□□ -1.01
CDH12P3-201ENST00000517935 SSUH2Q9Y2M2 353 aa8.77□□□□□ -1.01
CDH12P3-201ENST00000517935 SETBP1Q9Y6X0 1596 aa8.76□□□□□ -1.01
CDH12P3-201ENST00000517935 SPATA31A6Q5VVP1 1343 aa8.76□□□□□ -1.01
CDH12P3-201ENST00000517935 SAMD9Q5K651 1589 aa8.75□□□□□ -1.01
CDH12P3-201ENST00000517935 STRCP1A6NGW2 1772 aa8.75□□□□□ -1.01
CDH12P3-201ENST00000517935 KDM5DQ9BY66 1539 aa8.75□□□□□ -1.01
CDH12P3-201ENST00000517935 MYO5CQ9NQX4 1742 aa8.74□□□□□ -1.01
CDH12P3-201ENST00000517935 IQGAP1P46940 1657 aa8.74□□□□□ -1.01
CDH12P3-201ENST00000517935 CLTCQ00610 1675 aaKnown RBP8.74□□□□□ -1.01
CDH12P3-201ENST00000517935 EP400Q96L91 3159 aa8.74□□□□□ -1.01
CDH12P3-201ENST00000517935 ABCC1P33527 1531 aa8.72□□□□□ -1.01
CDH12P3-201ENST00000517935 MEX3CQ5U5Q3 659 aaKnown RBP8.72□□□□□ -1.01
CDH12P3-201ENST00000517935 CCDC125Q86Z20 511 aa8.72□□□□□ -1.01
CDH12P3-201ENST00000517935 ROBO1Q9Y6N7 1651 aa8.72□□□□□ -1.01
CDH12P3-201ENST00000517935 LRRC9Q6ZRR7 1453 aa8.71□□□□□ -1.01
CDH12P3-201ENST00000517935 ARHGAP5Q13017 1502 aa8.71□□□□□ -1.01
CDH12P3-201ENST00000517935 LRP5O75197 1615 aa8.71□□□□□ -1.02
CDH12P3-201ENST00000517935 ATAD2Q6PL18 1390 aa8.71□□□□□ -1.02
CDH12P3-201ENST00000517935 KIDINS220Q9ULH0 1771 aa8.71□□□□□ -1.02
CDH12P3-201ENST00000517935 FGD6Q6ZV73 1430 aa8.71□□□□□ -1.02
CDH12P3-201ENST00000517935 TNRQ92752 1358 aa8.7□□□□□ -1.02
CDH12P3-201ENST00000517935 FAM135AQ9P2D6 1515 aa8.7□□□□□ -1.02
CDH12P3-201ENST00000517935 LRP6O75581 1613 aa8.69□□□□□ -1.02
CDH12P3-201ENST00000517935 REM2Q8IYK8 340 aaPredicted RBP8.69□□□□□ -1.02
CDH12P3-201ENST00000517935 PRXQ9BXM0 1461 aa8.69□□□□□ -1.02
CDH12P3-201ENST00000517935 NLRP1Q9C000 1473 aa8.69□□□□□ -1.02
CDH12P3-201ENST00000517935 NUTM2BA6NNL0 878 aaPredicted RBP8.68□□□□□ -1.02
CDH12P3-201ENST00000517935 NUTM2EB1AL46 878 aaPredicted RBP8.68□□□□□ -1.02
CDH12P3-201ENST00000517935 NUTM2DQ5VT03 806 aaPredicted RBP8.68□□□□□ -1.02
CDH12P3-201ENST00000517935 NUTM2AQ8IVF1 878 aaPredicted RBP8.68□□□□□ -1.02
CDH12P3-201ENST00000517935 RGS12O14924 1447 aa8.67□□□□□ -1.02
CDH12P3-201ENST00000517935 RBM6P78332 1123 aaKnown RBP8.67□□□□□ -1.02
CDH12P3-201ENST00000517935 XIRP1Q702N8 1843 aaKnown RBP8.67□□□□□ -1.02
CDH12P3-201ENST00000517935 UGGT1Q9NYU2 1555 aa8.67□□□□□ -1.02
CDH12P3-201ENST00000517935 CDK11AQ9UQ88 783 aaPredicted RBP8.67□□□□□ -1.02
CDH12P3-201ENST00000517935 PHLPP1O60346 1717 aa8.66□□□□□ -1.02
CDH12P3-201ENST00000517935 ITSN2Q9NZM3 1697 aa8.66□□□□□ -1.02
CDH12P3-201ENST00000517935 ATP7AQ04656 1500 aa8.66□□□□□ -1.02
CDH12P3-201ENST00000517935 YY1P25490 414 aa8.66□□□□□ -1.02
CDH12P3-201ENST00000517935 PLXNC1O60486 1568 aa8.65□□□□□ -1.02
CDH12P3-201ENST00000517935 SUPT5HO00267 1087 aaKnown RBP8.65□□□□□ -1.02
CDH12P3-201ENST00000517935 GGT6Q6P531 493 aa8.65□□□□□ -1.02
CDH12P3-201ENST00000517935 NGLY1Q96IV0 654 aa8.65□□□□□ -1.02
CDH12P3-201ENST00000517935 SLAIN2Q9P270 581 aa8.65□□□□□ -1.02
CDH12P3-201ENST00000517935 CEP350Q5VT06 3117 aa8.65□□□□□ -1.02
CDH12P3-201ENST00000517935 MIA2Q96PC5 1412 aa8.64□□□□□ -1.03
CDH12P3-201ENST00000517935 PROM2Q8N271 834 aa8.64□□□□□ -1.03
CDH12P3-201ENST00000517935 ZC3H13Q5T200 1668 aaKnown RBP8.64□□□□□ -1.03
CDH12P3-201ENST00000517935 COL16A1Q07092 1604 aaPredicted RBP8.64□□□□□ -1.03
CDH12P3-201ENST00000517935 A2MP01023 1474 aa8.64□□□□□ -1.03
CDH12P3-201ENST00000517935 PZPP20742 1482 aa8.64□□□□□ -1.03
CDH12P3-201ENST00000517935 TMEM94Q12767 1356 aa8.63□□□□□ -1.03
CDH12P3-201ENST00000517935 KIF14Q15058 1648 aa8.63□□□□□ -1.03
CDH12P3-201ENST00000517935 FBXO31Q5XUX0 539 aaPredicted RBP8.63□□□□□ -1.03
CDH12P3-201ENST00000517935 SPDYE1Q8NFV5 336 aaPredicted RBP8.63□□□□□ -1.03
CDH12P3-201ENST00000517935 QTRT2Q9H974 415 aaKnown RBP8.63□□□□□ -1.03
CDH12P3-201ENST00000517935 SPAG9O60271 1321 aaKnown RBP8.62□□□□□ -1.03
CDH12P3-201ENST00000517935 AFF2P51816 1311 aa8.62□□□□□ -1.03
CDH12P3-201ENST00000517935 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
CDH12P3-201ENST00000517935 SAMD9LQ8IVG5 1584 aa8.61□□□□□ -1.03
CDH12P3-201ENST00000517935 NWD1Q149M9 1564 aa8.61□□□□□ -1.03
CDH12P3-201ENST00000517935 ABCC3O15438 1527 aa8.6□□□□□ -1.03
CDH12P3-201ENST00000517935 STAG3Q9UJ98 1225 aa8.6□□□□□ -1.03
CDH12P3-201ENST00000517935 CLEC11AQ9Y240 323 aa8.6□□□□□ -1.03
CDH12P3-201ENST00000517935 NHSL1Q5SYE7 1610 aa8.6□□□□□ -1.03
CDH12P3-201ENST00000517935 CLIP1P30622 1438 aa8.6□□□□□ -1.03
CDH12P3-201ENST00000517935 CDC42BPBQ9Y5S2 1711 aa8.6□□□□□ -1.03
CDH12P3-201ENST00000517935 SCAF11Q99590 1463 aaKnown RBP8.59□□□□□ -1.03
CDH12P3-201ENST00000517935 TROQ12816 1431 aaPredicted RBP8.59□□□□□ -1.03
CDH12P3-201ENST00000517935 MSH6P52701 1360 aa8.59□□□□□ -1.03
CDH12P3-201ENST00000517935 MAP3K1Q13233 1512 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms