RNA–Protein interactions for RNA: ENST00000517706.1

AC018541.1-201, humanhuman

TSL 3 BASIC

Gene AC018541.1, Length 764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC018541.1-201ENST00000517706 RIMBP3CA6NJZ7 1639 aa13.7□□□□□ -0.22
AC018541.1-201ENST00000517706 RIMBP3BA6NNM3 1639 aa13.7□□□□□ -0.22
AC018541.1-201ENST00000517706 RIMBP3Q9UFD9 1639 aa13.7□□□□□ -0.22
AC018541.1-201ENST00000517706 SOGA1O94964 1423 aa13.7□□□□□ -0.22
AC018541.1-201ENST00000517706 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
AC018541.1-201ENST00000517706 CUX1P39880 1505 aa13.69□□□□□ -0.22
AC018541.1-201ENST00000517706 FGD5Q6ZNL6 1462 aa13.68□□□□□ -0.22
AC018541.1-201ENST00000517706 ZNF316A6NFI3 1004 aaPredicted RBP13.68□□□□□ -0.22
AC018541.1-201ENST00000517706 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
AC018541.1-201ENST00000517706 TSHZ2Q9NRE2 1034 aa13.67□□□□□ -0.22
AC018541.1-201ENST00000517706 SUPT5HO00267 1087 aaKnown RBP13.66□□□□□ -0.22
AC018541.1-201ENST00000517706 LHX6Q9UPM6 363 aa13.65□□□□□ -0.22
AC018541.1-201ENST00000517706 KDM4FA0A1W2PPD8 638 aa13.64□□□□□ -0.23
AC018541.1-201ENST00000517706 EMILIN3Q9NT22 766 aa13.64□□□□□ -0.23
AC018541.1-201ENST00000517706 ARHGEF11O15085 1522 aa13.64□□□□□ -0.23
AC018541.1-201ENST00000517706 TDRD9Q8NDG6 1382 aaKnown RBP13.62□□□□□ -0.23
AC018541.1-201ENST00000517706 CAMK2BQ13554 666 aa13.62□□□□□ -0.23
AC018541.1-201ENST00000517706 WDR70Q9NW82 654 aa13.62□□□□□ -0.23
AC018541.1-201ENST00000517706 PBRM1Q86U86 1689 aa13.61□□□□□ -0.23
AC018541.1-201ENST00000517706 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
AC018541.1-201ENST00000517706 GRIN2BQ13224 1484 aa13.59□□□□□ -0.23
AC018541.1-201ENST00000517706 SNAPC4Q5SXM2 1469 aa13.59□□□□□ -0.23
AC018541.1-201ENST00000517706 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
AC018541.1-201ENST00000517706 ZNF687Q8N1G0 1237 aa13.58□□□□□ -0.24
AC018541.1-201ENST00000517706 ABCA10Q8WWZ4 1543 aa13.56□□□□□ -0.24
AC018541.1-201ENST00000517706 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
AC018541.1-201ENST00000517706 EVI5O60447 810 aa13.56□□□□□ -0.24
AC018541.1-201ENST00000517706 BIVM-ERCC5R4GMW8 1640 aa13.56□□□□□ -0.24
AC018541.1-201ENST00000517706 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
AC018541.1-201ENST00000517706 ABCA5Q8WWZ7 1642 aa13.55□□□□□ -0.24
AC018541.1-201ENST00000517706 KRTAP3-3Q9BYR6 98 aa13.55□□□□□ -0.24
AC018541.1-201ENST00000517706 KRTAP3-2Q9BYR7 98 aa13.55□□□□□ -0.24
AC018541.1-201ENST00000517706 GAPVD1Q14C86 1478 aa13.55□□□□□ -0.24
AC018541.1-201ENST00000517706 E2F4Q16254 413 aa13.54□□□□□ -0.24
AC018541.1-201ENST00000517706 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
AC018541.1-201ENST00000517706 TOP2BQ02880 1626 aa13.53□□□□□ -0.24
AC018541.1-201ENST00000517706 DPYSL4O14531 572 aa13.53□□□□□ -0.24
AC018541.1-201ENST00000517706 SYNJ2O15056 1496 aa13.53□□□□□ -0.24
AC018541.1-201ENST00000517706 CHMP7Q8WUX9 453 aaPredicted RBP13.52□□□□□ -0.25
AC018541.1-201ENST00000517706 ANO8Q9HCE9 1232 aaPredicted RBP13.51□□□□□ -0.25
AC018541.1-201ENST00000517706 PPP4R3BQ5MIZ7 849 aa13.5□□□□□ -0.25
AC018541.1-201ENST00000517706 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
AC018541.1-201ENST00000517706 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
AC018541.1-201ENST00000517706 HAP1P54257 671 aaPredicted RBP13.49□□□□□ -0.25
AC018541.1-201ENST00000517706 CYB5RLQ6IPT4 315 aa13.49□□□□□ -0.25
AC018541.1-201ENST00000517706 ZNF454Q8N9F8 522 aa13.47□□□□□ -0.25
AC018541.1-201ENST00000517706 PLSCR2Q9NRY7 297 aa13.46□□□□□ -0.25
AC018541.1-201ENST00000517706 PBX2P40425 430 aa13.45□□□□□ -0.26
AC018541.1-201ENST00000517706 JPH4Q96JJ6 628 aa13.45□□□□□ -0.26
AC018541.1-201ENST00000517706 FOSBP53539 338 aa13.44□□□□□ -0.26
AC018541.1-201ENST00000517706 ADAMTS12P58397 1594 aa13.43□□□□□ -0.26
AC018541.1-201ENST00000517706 POTEEQ6S8J3 1075 aa13.42□□□□□ -0.26
AC018541.1-201ENST00000517706 AXIN2Q9Y2T1 843 aa13.42□□□□□ -0.26
AC018541.1-201ENST00000517706 ARIH1Q9Y4X5 557 aaPredicted RBP13.42□□□□□ -0.26
AC018541.1-201ENST00000517706 ERICH3Q5RHP9 1530 aa13.41□□□□□ -0.26
AC018541.1-201ENST00000517706 PDIA6Q15084 440 aa13.41□□□□□ -0.26
AC018541.1-201ENST00000517706 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
AC018541.1-201ENST00000517706 ARHGAP33O14559 1287 aa13.39□□□□□ -0.27
AC018541.1-201ENST00000517706 SPDYE16A6NNV3 312 aaPredicted RBP13.38□□□□□ -0.27
AC018541.1-201ENST00000517706 SPNS2Q8IVW8 549 aa13.38□□□□□ -0.27
AC018541.1-201ENST00000517706 FHAD1B1AJZ9 1412 aa13.38□□□□□ -0.27
AC018541.1-201ENST00000517706 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
AC018541.1-201ENST00000517706 ZDHHC16Q969W1 377 aa13.37□□□□□ -0.27
AC018541.1-201ENST00000517706 CEP170Q5SW79 1584 aa13.37□□□□□ -0.27
AC018541.1-201ENST00000517706 KCNV2Q8TDN2 545 aa13.36□□□□□ -0.27
AC018541.1-201ENST00000517706 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
AC018541.1-201ENST00000517706 PCDHGA10Q9Y5H3 936 aa13.36□□□□□ -0.27
AC018541.1-201ENST00000517706 NUP160Q12769 1436 aa13.36□□□□□ -0.27
AC018541.1-201ENST00000517706 PHF14O94880 888 aa13.35□□□□□ -0.27
AC018541.1-201ENST00000517706 PSEN2P49810 448 aa13.35□□□□□ -0.27
AC018541.1-201ENST00000517706 ANKRD13DQ6ZTN6 518 aa13.35□□□□□ -0.27
AC018541.1-201ENST00000517706 KCNH8Q96L42 1107 aa13.35□□□□□ -0.27
AC018541.1-201ENST00000517706 KCNK17Q96T54 332 aa13.35□□□□□ -0.27
AC018541.1-201ENST00000517706 PTGER2P43116 358 aa13.34□□□□□ -0.27
AC018541.1-201ENST00000517706 DDX12PQ92771 950 aa13.34□□□□□ -0.27
AC018541.1-201ENST00000517706 SHROOM2Q13796 1616 aa13.34□□□□□ -0.27
AC018541.1-201ENST00000517706 ADAM33Q9BZ11 813 aa13.33□□□□□ -0.28
AC018541.1-201ENST00000517706 TYW1BQ6NUM6 668 aa13.32□□□□□ -0.28
AC018541.1-201ENST00000517706 P3H3Q8IVL6 736 aa13.32□□□□□ -0.28
AC018541.1-201ENST00000517706 ARHGEF1Q92888 912 aaKnown RBP13.32□□□□□ -0.28
AC018541.1-201ENST00000517706 DMRTA1Q5VZB9 504 aa13.31□□□□□ -0.28
AC018541.1-201ENST00000517706 FBXW7Q969H0 707 aa13.31□□□□□ -0.28
AC018541.1-201ENST00000517706 PTPREP23469 700 aa13.3□□□□□ -0.28
AC018541.1-201ENST00000517706 EPAS1Q99814 870 aa13.3□□□□□ -0.28
AC018541.1-201ENST00000517706 ERCC6L2Q5T890 1561 aa13.29□□□□□ -0.28
AC018541.1-201ENST00000517706 MMRN1Q13201 1228 aa13.28□□□□□ -0.28
AC018541.1-201ENST00000517706 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
AC018541.1-201ENST00000517706 NBR1Q14596 966 aa13.27□□□□□ -0.29
AC018541.1-201ENST00000517706 CUL7Q14999 1698 aa13.26□□□□□ -0.29
AC018541.1-201ENST00000517706 ADGRD1Q6QNK2 874 aa13.25□□□□□ -0.29
AC018541.1-201ENST00000517706 GRXCR2A6NFK2 248 aa13.24□□□□□ -0.29
AC018541.1-201ENST00000517706 TK2O00142 265 aa13.24□□□□□ -0.29
AC018541.1-201ENST00000517706 VSIG10Q8N0Z9 540 aa13.24□□□□□ -0.29
AC018541.1-201ENST00000517706 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
AC018541.1-201ENST00000517706 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
AC018541.1-201ENST00000517706 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
AC018541.1-201ENST00000517706 PRG4Q92954 1404 aaPredicted RBP13.21□□□□□ -0.3
AC018541.1-201ENST00000517706 IGF1RP08069 1367 aa13.2□□□□□ -0.3
AC018541.1-201ENST00000517706 PPP1R3GB7ZBB8 358 aa13.2□□□□□ -0.3
AC018541.1-201ENST00000517706 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms