RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 NCKAP5LQ9HCH0 1330 aa14.09□□□□□ -0.15
NPM1-204ENST00000517671 KIF3CO14782 793 aa14.08□□□□□ -0.16
NPM1-204ENST00000517671 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
NPM1-204ENST00000517671 DDX27Q96GQ7 796 aaKnown RBP14.08□□□□□ -0.16
NPM1-204ENST00000517671 HOXB3P14651 431 aaPredicted RBP14.07□□□□□ -0.16
NPM1-204ENST00000517671 GAPVD1Q14C86 1478 aa14.07□□□□□ -0.16
NPM1-204ENST00000517671 SLC24A1O60721 1099 aa14.05□□□□□ -0.16
NPM1-204ENST00000517671 FOXK1P85037 733 aa14.05□□□□□ -0.16
NPM1-204ENST00000517671 DSG2Q14126 1118 aa14.03□□□□□ -0.16
NPM1-204ENST00000517671 PPP1R15BQ5SWA1 713 aa14.03□□□□□ -0.16
NPM1-204ENST00000517671 CUX1P39880 1505 aa14.02□□□□□ -0.16
NPM1-204ENST00000517671 PLPP6Q8IY26 295 aa14.02□□□□□ -0.17
NPM1-204ENST00000517671 MFSD10Q14728 455 aa14.01□□□□□ -0.17
NPM1-204ENST00000517671 ZNF710Q8N1W2 664 aa14.01□□□□□ -0.17
NPM1-204ENST00000517671 ABCA10Q8WWZ4 1543 aa14□□□□□ -0.17
NPM1-204ENST00000517671 HOXB1P14653 301 aaPredicted RBP13.99□□□□□ -0.17
NPM1-204ENST00000517671 DOK7Q18PE1 504 aa13.98□□□□□ -0.17
NPM1-204ENST00000517671 WRNQ14191 1432 aaPredicted RBP eCLIP13.97□□□□□ -0.173e-7■■□□□ 13.1
NPM1-204ENST00000517671 RIMBP2O15034 1052 aa13.94□□□□□ -0.18
NPM1-204ENST00000517671 KDM2AQ9Y2K7 1162 aa13.94□□□□□ -0.18
NPM1-204ENST00000517671 GRIN2AQ12879 1464 aa13.93□□□□□ -0.18
NPM1-204ENST00000517671 ERBB3P21860 1342 aa13.93□□□□□ -0.18
NPM1-204ENST00000517671 E2F4Q16254 413 aa13.92□□□□□ -0.18
NPM1-204ENST00000517671 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
NPM1-204ENST00000517671 NUP160Q12769 1436 aa13.92□□□□□ -0.18
NPM1-204ENST00000517671 TBC1D12O60347 775 aa13.89□□□□□ -0.19
NPM1-204ENST00000517671 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
NPM1-204ENST00000517671 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
NPM1-204ENST00000517671 SLC34A2O95436 690 aa13.88□□□□□ -0.19
NPM1-204ENST00000517671 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
NPM1-204ENST00000517671 P3H3Q8IVL6 736 aa13.86□□□□□ -0.19
NPM1-204ENST00000517671 CAMK2BQ13554 666 aa13.85□□□□□ -0.19
NPM1-204ENST00000517671 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
NPM1-204ENST00000517671 UPF1Q92900 1129 aaKnown RBP eCLIP13.84□□□□□ -0.19
NPM1-204ENST00000517671 ZSWIM6Q9HCJ5 1215 aa13.84□□□□□ -0.19
NPM1-204ENST00000517671 CEP170Q5SW79 1584 aa13.83□□□□□ -0.19
NPM1-204ENST00000517671 MAP3K9P80192 1104 aa13.83□□□□□ -0.2
NPM1-204ENST00000517671 VARS2Q5ST30 1063 aaKnown RBP13.83□□□□□ -0.2
NPM1-204ENST00000517671 PRG4Q92954 1404 aaPredicted RBP13.82□□□□□ -0.2
NPM1-204ENST00000517671 FAM69CQ0P6D2 419 aa13.82□□□□□ -0.2
NPM1-204ENST00000517671 PTCD2Q8WV60 388 aaKnown RBP13.82□□□□□ -0.2
NPM1-204ENST00000517671 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
NPM1-204ENST00000517671 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
NPM1-204ENST00000517671 EMILIN3Q9NT22 766 aa13.79□□□□□ -0.2
NPM1-204ENST00000517671 PCDHGA4Q9Y5G9 962 aa13.79□□□□□ -0.2
NPM1-204ENST00000517671 SHROOM2Q13796 1616 aa13.79□□□□□ -0.2
NPM1-204ENST00000517671 SUPT5HO00267 1087 aaKnown RBP13.78□□□□□ -0.2
NPM1-204ENST00000517671 ARSIQ5FYB1 569 aa13.77□□□□□ -0.21
NPM1-204ENST00000517671 ABCC10Q5T3U5 1492 aa13.77□□□□□ -0.21
NPM1-204ENST00000517671 ERCC6L2Q5T890 1561 aa13.76□□□□□ -0.21
NPM1-204ENST00000517671 TOP2BQ02880 1626 aa13.76□□□□□ -0.21
NPM1-204ENST00000517671 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
NPM1-204ENST00000517671 GPR153Q6NV75 609 aa13.76□□□□□ -0.21
NPM1-204ENST00000517671 KCNV2Q8TDN2 545 aa13.76□□□□□ -0.21
NPM1-204ENST00000517671 RNF166Q96A37 237 aaPredicted RBP13.76□□□□□ -0.21
NPM1-204ENST00000517671 ZNF687Q8N1G0 1237 aa13.75□□□□□ -0.21
NPM1-204ENST00000517671 ARHGEF1Q92888 912 aaKnown RBP13.75□□□□□ -0.21
NPM1-204ENST00000517671 DPYSL4O14531 572 aa13.74□□□□□ -0.21
NPM1-204ENST00000517671 ARIH1Q9Y4X5 557 aaPredicted RBP13.72□□□□□ -0.21
NPM1-204ENST00000517671 MAPKBP1O60336 1514 aa13.72□□□□□ -0.21
NPM1-204ENST00000517671 BIVM-ERCC5R4GMW8 1640 aa13.71□□□□□ -0.21
NPM1-204ENST00000517671 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
NPM1-204ENST00000517671 NUDT7P0C024 238 aa13.69□□□□□ -0.22
NPM1-204ENST00000517671 KHSRPQ92945 711 aaKnown RBP eCLIP13.69□□□□□ -0.227e-7■■■■□ 24.8
NPM1-204ENST00000517671 SPDYE16A6NNV3 312 aaPredicted RBP13.68□□□□□ -0.22
NPM1-204ENST00000517671 EVI5O60447 810 aa13.68□□□□□ -0.22
NPM1-204ENST00000517671 KIAA0586Q9BVV6 1533 aa13.68□□□□□ -0.22
NPM1-204ENST00000517671 IGF1RP08069 1367 aa13.63□□□□□ -0.23
NPM1-204ENST00000517671 PTPRGP23470 1445 aa13.63□□□□□ -0.23
NPM1-204ENST00000517671 KIF27Q86VH2 1401 aa13.63□□□□□ -0.23
NPM1-204ENST00000517671 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
NPM1-204ENST00000517671 PDIA6Q15084 440 aa13.63□□□□□ -0.23
NPM1-204ENST00000517671 CARMIL2Q6F5E8 1435 aa13.62□□□□□ -0.23
NPM1-204ENST00000517671 KIF13AQ9H1H9 1805 aa13.62□□□□□ -0.23
NPM1-204ENST00000517671 ANO8Q9HCE9 1232 aaPredicted RBP13.62□□□□□ -0.23
NPM1-204ENST00000517671 PTGER2P43116 358 aa13.6□□□□□ -0.23
NPM1-204ENST00000517671 NBR1Q14596 966 aa13.6□□□□□ -0.23
NPM1-204ENST00000517671 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
NPM1-204ENST00000517671 DIP2BQ9P265 1576 aa13.59□□□□□ -0.23
NPM1-204ENST00000517671 LHX6Q9UPM6 363 aa13.59□□□□□ -0.23
NPM1-204ENST00000517671 TNIKQ9UKE5 1360 aa13.58□□□□□ -0.24
NPM1-204ENST00000517671 PSDA5PKW4 1024 aaPredicted RBP13.58□□□□□ -0.24
NPM1-204ENST00000517671 KDM6BO15054 1643 aa13.58□□□□□ -0.24
NPM1-204ENST00000517671 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
NPM1-204ENST00000517671 ANKRD13DQ6ZTN6 518 aa13.57□□□□□ -0.24
NPM1-204ENST00000517671 CARMIL1Q5VZK9 1371 aa13.55□□□□□ -0.24
NPM1-204ENST00000517671 ADCY10Q96PN6 1610 aa13.55□□□□□ -0.24
NPM1-204ENST00000517671 ABCC2Q92887 1545 aa13.53□□□□□ -0.24
NPM1-204ENST00000517671 DDX12PQ92771 950 aa13.53□□□□□ -0.24
NPM1-204ENST00000517671 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.25
NPM1-204ENST00000517671 ZNF454Q8N9F8 522 aa13.52□□□□□ -0.25
NPM1-204ENST00000517671 UHRF1BP1LA0JNW5 1464 aa13.52□□□□□ -0.25
NPM1-204ENST00000517671 CUL7Q14999 1698 aa13.51□□□□□ -0.25
NPM1-204ENST00000517671 SEMA3EO15041 775 aa13.51□□□□□ -0.25
NPM1-204ENST00000517671 PPP4R3BQ5MIZ7 849 aa13.51□□□□□ -0.25
NPM1-204ENST00000517671 SMYD5Q6GMV2 418 aa13.51□□□□□ -0.25
NPM1-204ENST00000517671 ASXL2Q76L83 1435 aa13.5□□□□□ -0.25
NPM1-204ENST00000517671 GLI2P10070 1586 aa13.49□□□□□ -0.25
NPM1-204ENST00000517671 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
NPM1-204ENST00000517671 TULP1O00294 542 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms