RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 MYO5CQ9NQX4 1742 aa9.08□□□□□ -0.96
CDH12-203ENST00000517378 GPRASP1Q5JY77 1395 aa9.07□□□□□ -0.96
CDH12-203ENST00000517378 EIF2AK4Q9P2K8 1649 aaKnown RBP9.07□□□□□ -0.96
CDH12-203ENST00000517378 TTC37Q6PGP7 1564 aa9.07□□□□□ -0.96
CDH12-203ENST00000517378 MSH5O43196 834 aa9.07□□□□□ -0.96
CDH12-203ENST00000517378 RSPH4AQ5TD94 716 aa9.07□□□□□ -0.96
CDH12-203ENST00000517378 PRAG1Q86YV5 1406 aa9.07□□□□□ -0.96
CDH12-203ENST00000517378 BRD4O60885 1362 aaPredicted RBP9.07□□□□□ -0.96
CDH12-203ENST00000517378 PRDM15P57071 1507 aaPredicted RBP9.07□□□□□ -0.96
CDH12-203ENST00000517378 NUDCQ9Y266 331 aa9.07□□□□□ -0.96
CDH12-203ENST00000517378 ZMYM4Q5VZL5 1548 aa9.06□□□□□ -0.96
CDH12-203ENST00000517378 SYCP2Q9BX26 1530 aa9.06□□□□□ -0.96
CDH12-203ENST00000517378 ATP10AO60312 1499 aa9.06□□□□□ -0.96
CDH12-203ENST00000517378 TSPY4P0CV99 314 aa9.06□□□□□ -0.96
CDH12-203ENST00000517378 TSPY10P0CW01 314 aa9.06□□□□□ -0.96
CDH12-203ENST00000517378 CHD1O14646 1710 aa9.06□□□□□ -0.96
CDH12-203ENST00000517378 RNF17Q9BXT8 1623 aaKnown RBP9.06□□□□□ -0.96
CDH12-203ENST00000517378 PNISRQ8TF01 805 aaKnown RBP9.06□□□□□ -0.96
CDH12-203ENST00000517378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.06□□□□□ -0.96
CDH12-203ENST00000517378 CARD11Q9BXL7 1154 aa9.05□□□□□ -0.96
CDH12-203ENST00000517378 PLEKHH2Q8IVE3 1493 aa9.05□□□□□ -0.96
CDH12-203ENST00000517378 PLA2R1Q13018 1463 aa9.04□□□□□ -0.96
CDH12-203ENST00000517378 MYBBP1AQ9BQG0 1328 aaKnown RBP9.04□□□□□ -0.96
CDH12-203ENST00000517378 RALBP1Q15311 655 aa9.04□□□□□ -0.96
CDH12-203ENST00000517378 INSRP06213 1382 aa9.04□□□□□ -0.96
CDH12-203ENST00000517378 COL17A1Q9UMD9 1497 aaPredicted RBP9.04□□□□□ -0.96
CDH12-203ENST00000517378 FBLN2P98095 1184 aa9.04□□□□□ -0.96
CDH12-203ENST00000517378 PARD3Q8TEW0 1356 aa9.04□□□□□ -0.96
CDH12-203ENST00000517378 A2MP01023 1474 aa9.04□□□□□ -0.96
CDH12-203ENST00000517378 ABCC2Q92887 1545 aa9.03□□□□□ -0.96
CDH12-203ENST00000517378 CCDC144AA2RUR9 1427 aa9.03□□□□□ -0.96
CDH12-203ENST00000517378 ZNF326Q5BKZ1 582 aaKnown RBP9.03□□□□□ -0.96
CDH12-203ENST00000517378 DUOX2Q9NRD8 1548 aa9.03□□□□□ -0.96
CDH12-203ENST00000517378 ARHGAP5Q13017 1502 aa9.03□□□□□ -0.96
CDH12-203ENST00000517378 ERBINQ96RT1 1412 aa9.03□□□□□ -0.96
CDH12-203ENST00000517378 ST20-MTHFSA0A0A6YYL1 179 aa9.02□□□□□ -0.97
CDH12-203ENST00000517378 HNRNPMP52272 730 aaKnown RBP eCLIP9.02□□□□□ -0.97
CDH12-203ENST00000517378 B4GALNT3Q6L9W6 998 aa9.02□□□□□ -0.97
CDH12-203ENST00000517378 DCAF11Q8TEB1 546 aa9□□□□□ -0.97
CDH12-203ENST00000517378 TMC1Q8TDI8 760 aa9□□□□□ -0.97
CDH12-203ENST00000517378 WASHC2CQ9Y4E1 1318 aa9□□□□□ -0.97
CDH12-203ENST00000517378 ABCC1P33527 1531 aa8.99□□□□□ -0.97
CDH12-203ENST00000517378 IQGAP1P46940 1657 aa8.99□□□□□ -0.97
CDH12-203ENST00000517378 BLMP54132 1417 aaPredicted RBP8.98□□□□□ -0.97
CDH12-203ENST00000517378 DEPDC5O75140 1603 aa8.98□□□□□ -0.97
CDH12-203ENST00000517378 CEP152O94986 1710 aa8.98□□□□□ -0.97
CDH12-203ENST00000517378 SPHKAPQ2M3C7 1700 aa8.98□□□□□ -0.97
CDH12-203ENST00000517378 ZCCHC11Q5TAX3 1644 aaKnown RBP8.98□□□□□ -0.97
CDH12-203ENST00000517378 NLRP13Q86W25 1043 aa8.98□□□□□ -0.97
CDH12-203ENST00000517378 ARAP3Q8WWN8 1544 aa8.98□□□□□ -0.97
CDH12-203ENST00000517378 MADDQ8WXG6 1647 aa8.98□□□□□ -0.97
CDH12-203ENST00000517378 UHRF1BP1LA0JNW5 1464 aa8.97□□□□□ -0.97
CDH12-203ENST00000517378 PER1O15534 1290 aaPredicted RBP8.97□□□□□ -0.97
CDH12-203ENST00000517378 POLR3GLQ9BT43 218 aa8.97□□□□□ -0.97
CDH12-203ENST00000517378 KDM2AQ9Y2K7 1162 aa8.97□□□□□ -0.97
CDH12-203ENST00000517378 NEURL4Q96JN8 1562 aa8.97□□□□□ -0.97
CDH12-203ENST00000517378 PDE3BQ13370 1112 aa8.96□□□□□ -0.97
CDH12-203ENST00000517378 TRPM2O94759 1503 aa8.96□□□□□ -0.97
CDH12-203ENST00000517378 PLCH2O75038 1416 aa8.96□□□□□ -0.97
CDH12-203ENST00000517378 TESK2Q96S53 571 aa8.96□□□□□ -0.98
CDH12-203ENST00000517378 ERCC6L2Q5T890 1561 aa8.96□□□□□ -0.98
CDH12-203ENST00000517378 DISP3Q9P2K9 1392 aa8.95□□□□□ -0.98
CDH12-203ENST00000517378 CLASP1Q7Z460 1538 aa8.95□□□□□ -0.98
CDH12-203ENST00000517378 KIAA1210Q9ULL0 1709 aa8.95□□□□□ -0.98
CDH12-203ENST00000517378 MYT1LQ9UL68 1186 aa8.95□□□□□ -0.98
CDH12-203ENST00000517378 SYNMO15061 1565 aa8.94□□□□□ -0.98
CDH12-203ENST00000517378 CCDC136Q96JN2 1154 aa8.94□□□□□ -0.98
CDH12-203ENST00000517378 ZFYVE16Q7Z3T8 1539 aa8.94□□□□□ -0.98
CDH12-203ENST00000517378 RTEL1-TNFRSF6BF6WH68 1400 aa8.94□□□□□ -0.98
CDH12-203ENST00000517378 RRP1P56182 461 aaKnown RBP8.94□□□□□ -0.98
CDH12-203ENST00000517378 TET3O43151 1660 aa8.93□□□□□ -0.98
CDH12-203ENST00000517378 NBPF1Q3BBV0 1214 aa8.93□□□□□ -0.98
CDH12-203ENST00000517378 VWDEQ8N2E2 1590 aa8.93□□□□□ -0.98
CDH12-203ENST00000517378 ERICH6Q7L0X2 663 aa8.93□□□□□ -0.98
CDH12-203ENST00000517378 MYOM1P52179 1685 aa8.93□□□□□ -0.98
CDH12-203ENST00000517378 PTPRTO14522 1441 aa8.92□□□□□ -0.98
CDH12-203ENST00000517378 SCAPERQ9BY12 1400 aa8.92□□□□□ -0.98
CDH12-203ENST00000517378 WDR7Q9Y4E6 1490 aa8.92□□□□□ -0.98
CDH12-203ENST00000517378 INO80Q9ULG1 1556 aaPredicted RBP8.92□□□□□ -0.98
CDH12-203ENST00000517378 CLTCL1P53675 1640 aa8.91□□□□□ -0.98
CDH12-203ENST00000517378 RCAN3Q9UKA8 241 aa8.91□□□□□ -0.98
CDH12-203ENST00000517378 ABCA9Q8IUA7 1624 aa8.91□□□□□ -0.98
CDH12-203ENST00000517378 STAC3Q96MF2 364 aa8.9□□□□□ -0.98
CDH12-203ENST00000517378 TMF1P82094 1093 aa8.9□□□□□ -0.98
CDH12-203ENST00000517378 CNGB1Q14028 1251 aaPredicted RBP8.9□□□□□ -0.98
CDH12-203ENST00000517378 TRAPPC8Q9Y2L5 1435 aa8.9□□□□□ -0.98
CDH12-203ENST00000517378 NOP58Q9Y2X3 529 aaKnown RBP8.9□□□□□ -0.98
CDH12-203ENST00000517378 SCAF11Q99590 1463 aaKnown RBP8.89□□□□□ -0.99
CDH12-203ENST00000517378 IFT172Q9UG01 1749 aa8.89□□□□□ -0.99
CDH12-203ENST00000517378 RGL3Q3MIN7 710 aa8.89□□□□□ -0.99
CDH12-203ENST00000517378 NPC1L1Q9UHC9 1359 aa8.88□□□□□ -0.99
CDH12-203ENST00000517378 EFCAB2Q5VUJ9 269 aa8.88□□□□□ -0.99
CDH12-203ENST00000517378 KDM5AP29375 1690 aaKnown RBP8.88□□□□□ -0.99
CDH12-203ENST00000517378 MROH1Q8NDA8 1641 aa8.87□□□□□ -0.99
CDH12-203ENST00000517378 MYO3AQ8NEV4 1616 aa8.87□□□□□ -0.99
CDH12-203ENST00000517378 PANK3Q9H999 370 aa8.87□□□□□ -0.99
CDH12-203ENST00000517378 PIK3C2GO75747 1445 aa8.87□□□□□ -0.99
CDH12-203ENST00000517378 MYOM2P54296 1465 aa8.87□□□□□ -0.99
CDH12-203ENST00000517378 ATP7AQ04656 1500 aa8.87□□□□□ -0.99
CDH12-203ENST00000517378 ASXL1Q8IXJ9 1541 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms