RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 KIF15Q9NS87 1388 aa22.82■■□□□ 1.24
PDCD6-211ENST00000515587 DUOX2Q9NRD8 1548 aa22.82■■□□□ 1.24
PDCD6-211ENST00000515587 DHX29Q7Z478 1369 aaKnown RBP22.81■■□□□ 1.24
PDCD6-211ENST00000515587 RRP7BPQ9NSQ0 103 aa22.81■■□□□ 1.24
PDCD6-211ENST00000515587 AGLP35573 1532 aa22.81■■□□□ 1.24
PDCD6-211ENST00000515587 PTPRKQ15262 1439 aa22.81■■□□□ 1.24
PDCD6-211ENST00000515587 PREX1Q8TCU6 1659 aa22.81■■□□□ 1.24
PDCD6-211ENST00000515587 NCOA1Q15788 1441 aa22.8■■□□□ 1.24
PDCD6-211ENST00000515587 ROCK1Q13464 1354 aa22.79■■□□□ 1.24
PDCD6-211ENST00000515587 EIF2AK4Q9P2K8 1649 aaKnown RBP22.76■■□□□ 1.23
PDCD6-211ENST00000515587 UHRF1BP1Q6BDS2 1440 aa22.75■■□□□ 1.23
PDCD6-211ENST00000515587 LTBP4Q8N2S1 1624 aa22.75■■□□□ 1.23
PDCD6-211ENST00000515587 PTPRTO14522 1441 aa22.74■■□□□ 1.23
PDCD6-211ENST00000515587 ERBINQ96RT1 1412 aa22.74■■□□□ 1.23
PDCD6-211ENST00000515587 KIF3BO15066 747 aa22.72■■□□□ 1.23
PDCD6-211ENST00000515587 GCC2Q8IWJ2 1684 aa22.68■■□□□ 1.22
PDCD6-211ENST00000515587 ANKRD50Q9ULJ7 1429 aa22.68■■□□□ 1.22
PDCD6-211ENST00000515587 GGT6Q6P531 493 aa22.67■■□□□ 1.22
PDCD6-211ENST00000515587 ESF1Q9H501 851 aaKnown RBP22.67■■□□□ 1.22
PDCD6-211ENST00000515587 RNF17Q9BXT8 1623 aaKnown RBP22.67■■□□□ 1.22
PDCD6-211ENST00000515587 IQSEC2Q5JU85 1478 aa22.66■■□□□ 1.22
PDCD6-211ENST00000515587 HFM1A2PYH4 1435 aa22.64■■□□□ 1.21
PDCD6-211ENST00000515587 PPP6R1Q9UPN7 881 aa22.62■■□□□ 1.21
PDCD6-211ENST00000515587 NAIPQ13075 1403 aa22.62■■□□□ 1.21
PDCD6-211ENST00000515587 DEPDC5O75140 1603 aa22.61■■□□□ 1.21
PDCD6-211ENST00000515587 FAM135AQ9P2D6 1515 aa22.61■■□□□ 1.21
PDCD6-211ENST00000515587 CNTLNQ9NXG0 1405 aa22.6■■□□□ 1.21
PDCD6-211ENST00000515587 KANK1Q14678 1352 aa22.6■■□□□ 1.21
PDCD6-211ENST00000515587 SETD1BQ9UPS6 1966 aaKnown RBP22.59■■□□□ 1.21
PDCD6-211ENST00000515587 CLTCQ00610 1675 aaKnown RBP22.59■■□□□ 1.21
PDCD6-211ENST00000515587 UBAP1LF5GYI3 381 aa22.59■■□□□ 1.21
PDCD6-211ENST00000515587 TRIM26Q12899 539 aaPredicted RBP22.59■■□□□ 1.21
PDCD6-211ENST00000515587 MROH1Q8NDA8 1641 aa22.58■■□□□ 1.21
PDCD6-211ENST00000515587 ZC3H13Q5T200 1668 aaKnown RBP22.58■■□□□ 1.2
PDCD6-211ENST00000515587 PRDM15P57071 1507 aaPredicted RBP22.57■■□□□ 1.2
PDCD6-211ENST00000515587 KDM5DQ9BY66 1539 aa22.57■■□□□ 1.2
PDCD6-211ENST00000515587 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.57■■□□□ 1.2
PDCD6-211ENST00000515587 MROH2AA6NES4 1674 aa22.57■■□□□ 1.2
PDCD6-211ENST00000515587 WASHC2CQ9Y4E1 1318 aa22.57■■□□□ 1.2
PDCD6-211ENST00000515587 UNC13BO14795 1591 aa22.56■■□□□ 1.2
PDCD6-211ENST00000515587 CEP152O94986 1710 aa22.54■■□□□ 1.2
PDCD6-211ENST00000515587 ZNF335Q9H4Z2 1342 aaPredicted RBP22.54■■□□□ 1.2
PDCD6-211ENST00000515587 SETD5Q9C0A6 1442 aa22.53■■□□□ 1.2
PDCD6-211ENST00000515587 ABCC3O15438 1527 aa22.52■■□□□ 1.19
PDCD6-211ENST00000515587 C3P01024 1663 aa22.5■■□□□ 1.19
PDCD6-211ENST00000515587 VWDEQ8N2E2 1590 aa22.49■■□□□ 1.19
PDCD6-211ENST00000515587 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
PDCD6-211ENST00000515587 CAMSAP1Q5T5Y3 1602 aa22.49■■□□□ 1.19
PDCD6-211ENST00000515587 NCKAP5LQ9HCH0 1330 aa22.48■■□□□ 1.19
PDCD6-211ENST00000515587 NUP155O75694 1391 aa22.48■■□□□ 1.19
PDCD6-211ENST00000515587 IQGAP3Q86VI3 1631 aa22.47■■□□□ 1.19
PDCD6-211ENST00000515587 ZMYM3Q14202 1370 aa22.47■■□□□ 1.19
PDCD6-211ENST00000515587 TRIM52Q96A61 297 aa22.46■■□□□ 1.19
PDCD6-211ENST00000515587 LMTK2Q8IWU2 1503 aa22.46■■□□□ 1.19
PDCD6-211ENST00000515587 HSPA1LP34931 641 aa22.45■■□□□ 1.18
PDCD6-211ENST00000515587 MED1Q15648 1581 aaPredicted RBP22.45■■□□□ 1.18
PDCD6-211ENST00000515587 TET3O43151 1660 aa22.44■■□□□ 1.18
PDCD6-211ENST00000515587 RAB3GAP2Q9H2M9 1393 aa22.43■■□□□ 1.18
PDCD6-211ENST00000515587 CFAP65Q6ZU64 1925 aaKnown RBP22.41■■□□□ 1.18
PDCD6-211ENST00000515587 EFCAB6Q5THR3 1501 aa22.41■■□□□ 1.18
PDCD6-211ENST00000515587 PZPP20742 1482 aa22.41■■□□□ 1.18
PDCD6-211ENST00000515587 ARHGAP31Q2M1Z3 1444 aa22.39■■□□□ 1.17
PDCD6-211ENST00000515587 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
PDCD6-211ENST00000515587 HRCP23327 699 aa22.37■■□□□ 1.17
PDCD6-211ENST00000515587 NPATQ14207 1427 aa22.37■■□□□ 1.17
PDCD6-211ENST00000515587 PIP4K2BP78356 416 aa22.36■■□□□ 1.17
PDCD6-211ENST00000515587 RPRD2Q5VT52 1461 aaKnown RBP22.34■■□□□ 1.17
PDCD6-211ENST00000515587 E9PCH4 1651 aa22.34■■□□□ 1.17
PDCD6-211ENST00000515587 SLC4A1APQ9BWU0 796 aaKnown RBP22.33■■□□□ 1.17
PDCD6-211ENST00000515587 FBXO31Q5XUX0 539 aaPredicted RBP22.32■■□□□ 1.16
PDCD6-211ENST00000515587 ERVK-7P63135 1459 aa22.32■■□□□ 1.16
PDCD6-211ENST00000515587 PKD2Q13563 968 aa22.31■■□□□ 1.16
PDCD6-211ENST00000515587 PHF23Q9BUL5 403 aaPredicted RBP22.31■■□□□ 1.16
PDCD6-211ENST00000515587 TNRQ92752 1358 aa22.3■■□□□ 1.16
PDCD6-211ENST00000515587 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
PDCD6-211ENST00000515587 MPHOSPH9Q99550 1183 aa22.28■■□□□ 1.16
PDCD6-211ENST00000515587 MYO3AQ8NEV4 1616 aa22.28■■□□□ 1.16
PDCD6-211ENST00000515587 PLA2R1Q13018 1463 aa22.27■■□□□ 1.16
PDCD6-211ENST00000515587 SPHKAPQ2M3C7 1700 aa22.26■■□□□ 1.15
PDCD6-211ENST00000515587 TOM1O60784 492 aa22.25■■□□□ 1.15
PDCD6-211ENST00000515587 NOS1P29475 1434 aa22.23■■□□□ 1.15
PDCD6-211ENST00000515587 NLRP1Q9C000 1473 aa22.23■■□□□ 1.15
PDCD6-211ENST00000515587 SYNMO15061 1565 aa22.22■■□□□ 1.15
PDCD6-211ENST00000515587 ZNF142P52746 1687 aaPredicted RBP22.22■■□□□ 1.15
PDCD6-211ENST00000515587 CEP170BQ9Y4F5 1589 aaPredicted RBP22.2■■□□□ 1.14
PDCD6-211ENST00000515587 A2ML1A8K2U0 1454 aa22.18■■□□□ 1.14
PDCD6-211ENST00000515587 SLC52A1Q9NWF4 448 aa22.18■■□□□ 1.14
PDCD6-211ENST00000515587 TRPM2O94759 1503 aa22.17■■□□□ 1.14
PDCD6-211ENST00000515587 FOXD1Q16676 465 aa22.16■■□□□ 1.14
PDCD6-211ENST00000515587 PIK3C2BO00750 1634 aa22.16■■□□□ 1.14
PDCD6-211ENST00000515587 SENP3Q9H4L4 574 aaPredicted RBP22.15■■□□□ 1.14
PDCD6-211ENST00000515587 UGGT1Q9NYU2 1555 aa22.14■■□□□ 1.13
PDCD6-211ENST00000515587 STAG3Q9UJ98 1225 aa22.14■■□□□ 1.13
PDCD6-211ENST00000515587 IDI1Q13907 227 aa22.13■■□□□ 1.13
PDCD6-211ENST00000515587 UBR1Q8IWV7 1749 aa22.13■■□□□ 1.13
PDCD6-211ENST00000515587 KDM5AP29375 1690 aaKnown RBP22.13■■□□□ 1.13
PDCD6-211ENST00000515587 CPS1P31327 1500 aa22.12■■□□□ 1.13
PDCD6-211ENST00000515587 KIF1BO60333 1816 aa22.11■■□□□ 1.13
PDCD6-211ENST00000515587 CLTCL1P53675 1640 aa22.1■■□□□ 1.13
PDCD6-211ENST00000515587 ALKQ9UM73 1620 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms