RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 CHIC2Q9UKJ5 165 aa20.26■□□□□ 0.83
CDK7-213ENST00000515391 DNMT1P26358 1616 aaKnown RBP20.26■□□□□ 0.83
CDK7-213ENST00000515391 PTPRKQ15262 1439 aa20.26■□□□□ 0.83
CDK7-213ENST00000515391 NPATQ14207 1427 aa20.25■□□□□ 0.83
CDK7-213ENST00000515391 WASHC2CQ9Y4E1 1318 aa20.24■□□□□ 0.83
CDK7-213ENST00000515391 FBXO31Q5XUX0 539 aaPredicted RBP20.23■□□□□ 0.83
CDK7-213ENST00000515391 SHANK2Q9UPX8 1470 aa20.23■□□□□ 0.83
CDK7-213ENST00000515391 KIF15Q9NS87 1388 aa20.22■□□□□ 0.83
CDK7-213ENST00000515391 KDM5DQ9BY66 1539 aa20.22■□□□□ 0.83
CDK7-213ENST00000515391 DUOX2Q9NRD8 1548 aa20.21■□□□□ 0.83
CDK7-213ENST00000515391 STRCQ7RTU9 1775 aa20.21■□□□□ 0.83
CDK7-213ENST00000515391 RNF17Q9BXT8 1623 aaKnown RBP20.19■□□□□ 0.82
CDK7-213ENST00000515391 EIF2AK4Q9P2K8 1649 aaKnown RBP20.19■□□□□ 0.82
CDK7-213ENST00000515391 ILDR1Q86SU0 546 aaPredicted RBP20.18■□□□□ 0.82
CDK7-213ENST00000515391 MROH1Q8NDA8 1641 aa20.17■□□□□ 0.82
CDK7-213ENST00000515391 MYO3AQ8NEV4 1616 aa20.17■□□□□ 0.82
CDK7-213ENST00000515391 ANKRD30AQ9BXX3 1397 aa20.15■□□□□ 0.82
CDK7-213ENST00000515391 PZPP20742 1482 aa20.15■□□□□ 0.82
CDK7-213ENST00000515391 ABCC3O15438 1527 aa20.15■□□□□ 0.82
CDK7-213ENST00000515391 FAM135AQ9P2D6 1515 aa20.15■□□□□ 0.82
CDK7-213ENST00000515391 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.14■□□□□ 0.81
CDK7-213ENST00000515391 CEP152O94986 1710 aa20.13■□□□□ 0.81
CDK7-213ENST00000515391 CAMSAP1Q5T5Y3 1602 aa20.13■□□□□ 0.81
CDK7-213ENST00000515391 CEP170BQ9Y4F5 1589 aaPredicted RBP20.13■□□□□ 0.81
CDK7-213ENST00000515391 NCOA1Q15788 1441 aa20.13■□□□□ 0.81
CDK7-213ENST00000515391 ERBINQ96RT1 1412 aa20.13■□□□□ 0.81
CDK7-213ENST00000515391 TNRQ92752 1358 aa20.13■□□□□ 0.81
CDK7-213ENST00000515391 ZNF142P52746 1687 aaPredicted RBP20.12■□□□□ 0.81
CDK7-213ENST00000515391 NCKAP5LQ9HCH0 1330 aa20.11■□□□□ 0.81
CDK7-213ENST00000515391 DMRT2Q9Y5R5 561 aa20.1■□□□□ 0.81
CDK7-213ENST00000515391 ADGRL2O95490 1459 aa20.1■□□□□ 0.81
CDK7-213ENST00000515391 ZC3H13Q5T200 1668 aaKnown RBP20.1■□□□□ 0.81
CDK7-213ENST00000515391 ITGAEP38570 1179 aa20.09■□□□□ 0.81
CDK7-213ENST00000515391 A2ML1A8K2U0 1454 aa20.09■□□□□ 0.81
CDK7-213ENST00000515391 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.81
CDK7-213ENST00000515391 PRDM15P57071 1507 aaPredicted RBP20.07■□□□□ 0.8
CDK7-213ENST00000515391 PTPRTO14522 1441 aa20.06■□□□□ 0.8
CDK7-213ENST00000515391 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
CDK7-213ENST00000515391 ERVK-7P63135 1459 aa20.04■□□□□ 0.8
CDK7-213ENST00000515391 CERKQ8TCT0 537 aa20.03■□□□□ 0.8
CDK7-213ENST00000515391 KANK1Q14678 1352 aa20.03■□□□□ 0.8
CDK7-213ENST00000515391 SPATA31D1Q6ZQQ2 1576 aa20.03■□□□□ 0.8
CDK7-213ENST00000515391 ANKRD50Q9ULJ7 1429 aa20.02■□□□□ 0.8
CDK7-213ENST00000515391 PLA2R1Q13018 1463 aa20.02■□□□□ 0.8
CDK7-213ENST00000515391 FBXO41Q8TF61 875 aa20.01■□□□□ 0.79
CDK7-213ENST00000515391 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20■□□□□ 0.79
CDK7-213ENST00000515391 PKD2Q13563 968 aa20■□□□□ 0.79
CDK7-213ENST00000515391 NLRP1Q9C000 1473 aa19.99■□□□□ 0.79
CDK7-213ENST00000515391 VWDEQ8N2E2 1590 aa19.99■□□□□ 0.79
CDK7-213ENST00000515391 ARHGAP31Q2M1Z3 1444 aa19.98■□□□□ 0.79
CDK7-213ENST00000515391 UGGT1Q9NYU2 1555 aa19.98■□□□□ 0.79
CDK7-213ENST00000515391 THEMISQ8N1K5 641 aaPredicted RBP19.97■□□□□ 0.79
CDK7-213ENST00000515391 ROCK1Q13464 1354 aa19.95■□□□□ 0.79
CDK7-213ENST00000515391 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
CDK7-213ENST00000515391 RRBP1Q9P2E9 1410 aaKnown RBP19.94■□□□□ 0.78
CDK7-213ENST00000515391 ZNF335Q9H4Z2 1342 aaPredicted RBP19.94■□□□□ 0.78
CDK7-213ENST00000515391 ANKLE2Q86XL3 938 aa19.93■□□□□ 0.78
CDK7-213ENST00000515391 LTBP4Q8N2S1 1624 aa19.93■□□□□ 0.78
CDK7-213ENST00000515391 NEURL4Q96JN8 1562 aa19.92■□□□□ 0.78
CDK7-213ENST00000515391 POLR1AO95602 1720 aaPredicted RBP19.92■□□□□ 0.78
CDK7-213ENST00000515391 EFCAB6Q5THR3 1501 aa19.9■□□□□ 0.78
CDK7-213ENST00000515391 UBR1Q8IWV7 1749 aa19.9■□□□□ 0.78
CDK7-213ENST00000515391 UNC13BO14795 1591 aa19.89■□□□□ 0.77
CDK7-213ENST00000515391 IDI1Q13907 227 aa19.88■□□□□ 0.77
CDK7-213ENST00000515391 PIK3C2BO00750 1634 aa19.87■□□□□ 0.77
CDK7-213ENST00000515391 SYNMO15061 1565 aa19.87■□□□□ 0.77
CDK7-213ENST00000515391 NOS1P29475 1434 aa19.86■□□□□ 0.77
CDK7-213ENST00000515391 NPHP4O75161 1426 aaPredicted RBP19.85■□□□□ 0.77
CDK7-213ENST00000515391 TET3O43151 1660 aa19.85■□□□□ 0.77
CDK7-213ENST00000515391 STAG3Q9UJ98 1225 aa19.85■□□□□ 0.77
CDK7-213ENST00000515391 LTKP29376 864 aa19.84■□□□□ 0.77
CDK7-213ENST00000515391 NUP155O75694 1391 aa19.83■□□□□ 0.77
CDK7-213ENST00000515391 MED14O60244 1454 aa19.83■□□□□ 0.76
CDK7-213ENST00000515391 TXNDC2Q86VQ3 553 aa19.82■□□□□ 0.76
CDK7-213ENST00000515391 GCC2Q8IWJ2 1684 aa19.81■□□□□ 0.76
CDK7-213ENST00000515391 IQGAP3Q86VI3 1631 aa19.8■□□□□ 0.76
CDK7-213ENST00000515391 RPRD2Q5VT52 1461 aaKnown RBP19.8■□□□□ 0.76
CDK7-213ENST00000515391 ARHGAP23Q9P227 1491 aa19.8■□□□□ 0.76
CDK7-213ENST00000515391 E9PCH4 1651 aa19.8■□□□□ 0.76
CDK7-213ENST00000515391 IQGAP1P46940 1657 aa19.8■□□□□ 0.76
CDK7-213ENST00000515391 SLIT1O75093 1534 aa19.79■□□□□ 0.76
CDK7-213ENST00000515391 SCAF11Q99590 1463 aaKnown RBP19.79■□□□□ 0.76
CDK7-213ENST00000515391 NAIPQ13075 1403 aa19.78■□□□□ 0.76
CDK7-213ENST00000515391 SLC52A1Q9NWF4 448 aa19.78■□□□□ 0.76
CDK7-213ENST00000515391 TMEM2Q9UHN6 1383 aa19.78■□□□□ 0.76
CDK7-213ENST00000515391 EID1Q9Y6B2 187 aa19.76■□□□□ 0.75
CDK7-213ENST00000515391 ADGRB3O60242 1522 aa19.75■□□□□ 0.75
CDK7-213ENST00000515391 CHGAP10645 457 aaKnown RBP19.74■□□□□ 0.75
CDK7-213ENST00000515391 KDM5AP29375 1690 aaKnown RBP19.74■□□□□ 0.75
CDK7-213ENST00000515391 IQSEC2Q5JU85 1478 aa19.73■□□□□ 0.75
CDK7-213ENST00000515391 MYO5BQ9ULV0 1848 aa19.73■□□□□ 0.75
CDK7-213ENST00000515391 STRCP1A6NGW2 1772 aa19.71■□□□□ 0.75
CDK7-213ENST00000515391 HFM1A2PYH4 1435 aa19.7■□□□□ 0.74
CDK7-213ENST00000515391 UBAP1LF5GYI3 381 aa19.7■□□□□ 0.74
CDK7-213ENST00000515391 TRIM52Q96A61 297 aa19.7■□□□□ 0.74
CDK7-213ENST00000515391 CPS1P31327 1500 aa19.7■□□□□ 0.74
CDK7-213ENST00000515391 TMEM131LA2VDJ0 1609 aa19.69■□□□□ 0.74
CDK7-213ENST00000515391 SLC26A8Q96RN1 970 aa19.68■□□□□ 0.74
CDK7-213ENST00000515391 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
CDK7-213ENST00000515391 BCANQ96GW7 911 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms