RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 ARHGEF12Q9NZN5 1544 aa17.16■□□□□ 0.34
SDHA-216ENST00000514027 ERCC6L2Q5T890 1561 aa17.15■□□□□ 0.34
SDHA-216ENST00000514027 FAM135AQ9P2D6 1515 aa17.15■□□□□ 0.34
SDHA-216ENST00000514027 SHROOM2Q13796 1616 aa17.15■□□□□ 0.34
SDHA-216ENST00000514027 UHRF1BP1Q6BDS2 1440 aa17.15■□□□□ 0.34
SDHA-216ENST00000514027 DEKP35659 375 aaKnown RBP17.14■□□□□ 0.33
SDHA-216ENST00000514027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.14■□□□□ 0.33
SDHA-216ENST00000514027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
SDHA-216ENST00000514027 RSPH4AQ5TD94 716 aa17.12■□□□□ 0.33
SDHA-216ENST00000514027 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
SDHA-216ENST00000514027 DHX29Q7Z478 1369 aaKnown RBP17.12■□□□□ 0.33
SDHA-216ENST00000514027 ABCC2Q92887 1545 aa17.11■□□□□ 0.33
SDHA-216ENST00000514027 MYO5CQ9NQX4 1742 aa17.11■□□□□ 0.33
SDHA-216ENST00000514027 ZBED9Q6R2W3 1325 aa17.09■□□□□ 0.33
SDHA-216ENST00000514027 ERICH6BQ5W0A0 696 aa17.09■□□□□ 0.33
SDHA-216ENST00000514027 UBE2Q2Q8WVN8 375 aa17.09■□□□□ 0.33
SDHA-216ENST00000514027 CCDC144AA2RUR9 1427 aa17.09■□□□□ 0.33
SDHA-216ENST00000514027 SALL2Q9Y467 1007 aaPredicted RBP17.09■□□□□ 0.33
SDHA-216ENST00000514027 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.33
SDHA-216ENST00000514027 ST20-MTHFSA0A0A6YYL1 179 aa17.08■□□□□ 0.33
SDHA-216ENST00000514027 ARID4BQ4LE39 1312 aaPredicted RBP17.08■□□□□ 0.32
SDHA-216ENST00000514027 RGL3Q3MIN7 710 aa17.08■□□□□ 0.32
SDHA-216ENST00000514027 MAST1Q9Y2H9 1570 aa17.07■□□□□ 0.32
SDHA-216ENST00000514027 UNC13BO14795 1591 aa17.06■□□□□ 0.32
SDHA-216ENST00000514027 AMER1Q5JTC6 1135 aaPredicted RBP17.05■□□□□ 0.32
SDHA-216ENST00000514027 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
SDHA-216ENST00000514027 PLEKHH2Q8IVE3 1493 aa17.03■□□□□ 0.32
SDHA-216ENST00000514027 PLXNC1O60486 1568 aa17.03■□□□□ 0.32
SDHA-216ENST00000514027 ZCCHC11Q5TAX3 1644 aaKnown RBP17.03■□□□□ 0.32
SDHA-216ENST00000514027 SENP3-EIF4A1A0A087X0R7 540 aa17.01■□□□□ 0.31
SDHA-216ENST00000514027 PRAG1Q86YV5 1406 aa17.01■□□□□ 0.31
SDHA-216ENST00000514027 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
SDHA-216ENST00000514027 IQGAP3Q86VI3 1631 aa17■□□□□ 0.31
SDHA-216ENST00000514027 TMC1Q8TDI8 760 aa17■□□□□ 0.31
SDHA-216ENST00000514027 PLA2R1Q13018 1463 aa16.99■□□□□ 0.31
SDHA-216ENST00000514027 DUOX2Q9NRD8 1548 aa16.99■□□□□ 0.31
SDHA-216ENST00000514027 A2MP01023 1474 aa16.98■□□□□ 0.31
SDHA-216ENST00000514027 PLCH2O75038 1416 aa16.98■□□□□ 0.31
SDHA-216ENST00000514027 NBPF1Q3BBV0 1214 aa16.97■□□□□ 0.31
SDHA-216ENST00000514027 EFCAB2Q5VUJ9 269 aa16.97■□□□□ 0.31
SDHA-216ENST00000514027 CCDC136Q96JN2 1154 aa16.96■□□□□ 0.31
SDHA-216ENST00000514027 ERBINQ96RT1 1412 aa16.96■□□□□ 0.3
SDHA-216ENST00000514027 E9PCH4 1651 aa16.95■□□□□ 0.3
SDHA-216ENST00000514027 ABCC1P33527 1531 aa16.95■□□□□ 0.3
SDHA-216ENST00000514027 PPP4R2Q9NY27 417 aa16.95■□□□□ 0.3
SDHA-216ENST00000514027 TRAPPC8Q9Y2L5 1435 aa16.94■□□□□ 0.3
SDHA-216ENST00000514027 PNISRQ8TF01 805 aaKnown RBP16.93■□□□□ 0.3
SDHA-216ENST00000514027 ARXQ96QS3 562 aa16.93■□□□□ 0.3
SDHA-216ENST00000514027 MYBBP1AQ9BQG0 1328 aaKnown RBP16.92■□□□□ 0.3
SDHA-216ENST00000514027 MAGI2Q86UL8 1455 aa16.92■□□□□ 0.3
SDHA-216ENST00000514027 UHRF1BP1LA0JNW5 1464 aa16.92■□□□□ 0.3
SDHA-216ENST00000514027 SMG6Q86US8 1419 aaKnown RBP16.91■□□□□ 0.3
SDHA-216ENST00000514027 B4GALNT3Q6L9W6 998 aa16.91■□□□□ 0.3
SDHA-216ENST00000514027 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
SDHA-216ENST00000514027 RALBP1Q15311 655 aa16.9■□□□□ 0.3
SDHA-216ENST00000514027 NUDCQ9Y266 331 aa16.9■□□□□ 0.3
SDHA-216ENST00000514027 SPAG9O60271 1321 aaKnown RBP16.9■□□□□ 0.3
SDHA-216ENST00000514027 PRDM15P57071 1507 aaPredicted RBP16.89■□□□□ 0.29
SDHA-216ENST00000514027 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
SDHA-216ENST00000514027 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.29
SDHA-216ENST00000514027 AFAP1Q8N556 730 aa16.88■□□□□ 0.29
SDHA-216ENST00000514027 KTN1Q86UP2 1357 aaKnown RBP16.88■□□□□ 0.29
SDHA-216ENST00000514027 DISP3Q9P2K9 1392 aa16.88■□□□□ 0.29
SDHA-216ENST00000514027 COL17A1Q9UMD9 1497 aaPredicted RBP16.87■□□□□ 0.29
SDHA-216ENST00000514027 LAMC1P11047 1609 aa16.87■□□□□ 0.29
SDHA-216ENST00000514027 ATP10AO60312 1499 aa16.87■□□□□ 0.29
SDHA-216ENST00000514027 ZFYVE16Q7Z3T8 1539 aa16.85■□□□□ 0.29
SDHA-216ENST00000514027 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
SDHA-216ENST00000514027 CC2D1BQ5T0F9 858 aaKnown RBP16.84■□□□□ 0.29
SDHA-216ENST00000514027 TESK2Q96S53 571 aa16.84■□□□□ 0.29
SDHA-216ENST00000514027 TMF1P82094 1093 aa16.82■□□□□ 0.28
SDHA-216ENST00000514027 NLRP13Q86W25 1043 aa16.82■□□□□ 0.28
SDHA-216ENST00000514027 PARD3Q8TEW0 1356 aa16.82■□□□□ 0.28
SDHA-216ENST00000514027 WDR7Q9Y4E6 1490 aa16.82■□□□□ 0.28
SDHA-216ENST00000514027 RNF17Q9BXT8 1623 aaKnown RBP16.81■□□□□ 0.28
SDHA-216ENST00000514027 FANCAO15360 1455 aa16.8■□□□□ 0.28
SDHA-216ENST00000514027 RTEL1-TNFRSF6BF6WH68 1400 aa16.8■□□□□ 0.28
SDHA-216ENST00000514027 PANK3Q9H999 370 aa16.8■□□□□ 0.28
SDHA-216ENST00000514027 ARAP3Q8WWN8 1544 aa16.8■□□□□ 0.28
SDHA-216ENST00000514027 PER1O15534 1290 aaPredicted RBP16.8■□□□□ 0.28
SDHA-216ENST00000514027 SPHKAPQ2M3C7 1700 aa16.79■□□□□ 0.28
SDHA-216ENST00000514027 MADDQ8WXG6 1647 aa16.79■□□□□ 0.28
SDHA-216ENST00000514027 TRPM2O94759 1503 aa16.79■□□□□ 0.28
SDHA-216ENST00000514027 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.78■□□□□ 0.28
SDHA-216ENST00000514027 ATP7AQ04656 1500 aa16.78■□□□□ 0.28
SDHA-216ENST00000514027 CEP152O94986 1710 aa16.78■□□□□ 0.28
SDHA-216ENST00000514027 CLTCL1P53675 1640 aa16.77■□□□□ 0.28
SDHA-216ENST00000514027 ABCA9Q8IUA7 1624 aa16.77■□□□□ 0.27
SDHA-216ENST00000514027 KANK1Q14678 1352 aa16.76■□□□□ 0.27
SDHA-216ENST00000514027 KIF3BO15066 747 aa16.76■□□□□ 0.27
SDHA-216ENST00000514027 ADGRL1O94910 1474 aa16.76■□□□□ 0.27
SDHA-216ENST00000514027 DEPDC5O75140 1603 aa16.76■□□□□ 0.27
SDHA-216ENST00000514027 IL27Q8NEV9 243 aa16.76■□□□□ 0.27
SDHA-216ENST00000514027 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
SDHA-216ENST00000514027 INO80Q9ULG1 1556 aaPredicted RBP16.76■□□□□ 0.27
SDHA-216ENST00000514027 RNF123Q5XPI4 1314 aa16.75■□□□□ 0.27
SDHA-216ENST00000514027 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
SDHA-216ENST00000514027 TET3O43151 1660 aa16.75■□□□□ 0.27
SDHA-216ENST00000514027 IQGAP1P46940 1657 aa16.73■□□□□ 0.27
SDHA-216ENST00000514027 NBR1Q14596 966 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms