RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	PTPRK	Q15262	1439 aa		13.3	□□□□□ -0.28
ACSF2-223	ENST00000513101	CEBPA	P49715	358 aa	Predicted RBP	13.29	□□□□□ -0.28
ACSF2-223	ENST00000513101	PCGF6	Q9BYE7	350 aa		13.29	□□□□□ -0.28
ACSF2-223	ENST00000513101	ROCK1	Q13464	1354 aa		13.29	□□□□□ -0.28
ACSF2-223	ENST00000513101	ZMYM3	Q14202	1370 aa		13.29	□□□□□ -0.28
ACSF2-223	ENST00000513101	ERBIN	Q96RT1	1412 aa		13.29	□□□□□ -0.28
ACSF2-223	ENST00000513101	RIMS1	Q86UR5	1692 aa	Known RBP	13.28	□□□□□ -0.28
ACSF2-223	ENST00000513101	WASHC2C	Q9Y4E1	1318 aa		13.27	□□□□□ -0.29
ACSF2-223	ENST00000513101	CROCC2	H7BZ55	1655 aa		13.27	□□□□□ -0.29
ACSF2-223	ENST00000513101	FER1L4	A9Z1Z3	1794 aa		13.26	□□□□□ -0.29
ACSF2-223	ENST00000513101	PLPPR3	Q6T4P5	718 aa		13.26	□□□□□ -0.29
ACSF2-223	ENST00000513101	FAM135A	Q9P2D6	1515 aa		13.26	□□□□□ -0.29
ACSF2-223	ENST00000513101	ITGAE	P38570	1179 aa		13.25	□□□□□ -0.29
ACSF2-223	ENST00000513101	ANKRD50	Q9ULJ7	1429 aa		13.24	□□□□□ -0.29
ACSF2-223	ENST00000513101	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.24	□□□□□ -0.29
ACSF2-223	ENST00000513101	NPAT	Q14207	1427 aa		13.22	□□□□□ -0.29
ACSF2-223	ENST00000513101	KDM5D	Q9BY66	1539 aa		13.22	□□□□□ -0.29
ACSF2-223	ENST00000513101	RNF17	Q9BXT8	1623 aa	Known RBP	13.21	□□□□□ -0.29
ACSF2-223	ENST00000513101	MROH2A	A6NES4	1674 aa		13.21	□□□□□ -0.3
ACSF2-223	ENST00000513101	KANK1	Q14678	1352 aa		13.2	□□□□□ -0.3
ACSF2-223	ENST00000513101	SOCS7	O14512	581 aa		13.2	□□□□□ -0.3
ACSF2-223	ENST00000513101	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.2	□□□□□ -0.3	1e-8	■□□□□ 10
ACSF2-223	ENST00000513101	PZP	P20742	1482 aa		13.18	□□□□□ -0.3
ACSF2-223	ENST00000513101	UHRF1BP1	Q6BDS2	1440 aa		13.18	□□□□□ -0.3
ACSF2-223	ENST00000513101	ABCC3	O15438	1527 aa		13.18	□□□□□ -0.3
ACSF2-223	ENST00000513101	C3	P01024	1663 aa		13.18	□□□□□ -0.3
ACSF2-223	ENST00000513101	MROH1	Q8NDA8	1641 aa		13.17	□□□□□ -0.3
ACSF2-223	ENST00000513101	ARHGAP31	Q2M1Z3	1444 aa		13.17	□□□□□ -0.3
ACSF2-223	ENST00000513101	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.17	□□□□□ -0.3
ACSF2-223	ENST00000513101	CLTC	Q00610	1675 aa	Known RBP	13.17	□□□□□ -0.3
ACSF2-223	ENST00000513101	PRDM15	P57071	1507 aa	Predicted RBP	13.17	□□□□□ -0.3
ACSF2-223	ENST00000513101	SETD1B	Q9UPS6	1966 aa	Known RBP	13.16	□□□□□ -0.3
ACSF2-223	ENST00000513101	ILDR2	Q71H61	639 aa		13.16	□□□□□ -0.3
ACSF2-223	ENST00000513101	LMTK2	Q8IWU2	1503 aa		13.15	□□□□□ -0.3
ACSF2-223	ENST00000513101	VWDE	Q8N2E2	1590 aa		13.15	□□□□□ -0.3
ACSF2-223	ENST00000513101	NAIP	Q13075	1403 aa		13.14	□□□□□ -0.31
ACSF2-223	ENST00000513101	DEPDC5	O75140	1603 aa		13.14	□□□□□ -0.31
ACSF2-223	ENST00000513101	HSPA2	P54652	639 aa		13.14	□□□□□ -0.31
ACSF2-223	ENST00000513101	TNR	Q92752	1358 aa		13.14	□□□□□ -0.31
ACSF2-223	ENST00000513101	HFM1	A2PYH4	1435 aa		13.13	□□□□□ -0.31
ACSF2-223	ENST00000513101	ZC3H13	Q5T200	1668 aa	Known RBP	13.13	□□□□□ -0.31
ACSF2-223	ENST00000513101	NUP155	O75694	1391 aa		13.11	□□□□□ -0.31
ACSF2-223	ENST00000513101	PREX1	Q8TCU6	1659 aa		13.11	□□□□□ -0.31
ACSF2-223	ENST00000513101	ERVK-7	P63135	1459 aa		13.1	□□□□□ -0.31
ACSF2-223	ENST00000513101	SPATA31D1	Q6ZQQ2	1576 aa		13.09	□□□□□ -0.31
ACSF2-223	ENST00000513101	A2ML1	A8K2U0	1454 aa		13.09	□□□□□ -0.31
ACSF2-223	ENST00000513101	NLRP1	Q9C000	1473 aa		13.09	□□□□□ -0.31
ACSF2-223	ENST00000513101	ACIN1	Q9UKV3	1341 aa	Known RBP	13.09	□□□□□ -0.31
ACSF2-223	ENST00000513101	DISP3	Q9P2K9	1392 aa		13.08	□□□□□ -0.31
ACSF2-223	ENST00000513101	UNC13B	O14795	1591 aa		13.08	□□□□□ -0.32
ACSF2-223	ENST00000513101	RPRD2	Q5VT52	1461 aa	Known RBP	13.08	□□□□□ -0.32
ACSF2-223	ENST00000513101	CAMSAP1	Q5T5Y3	1602 aa		13.07	□□□□□ -0.32
ACSF2-223	ENST00000513101	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.07	□□□□□ -0.32
ACSF2-223	ENST00000513101	DMRT2	Q9Y5R5	561 aa		13.07	□□□□□ -0.32
ACSF2-223	ENST00000513101	NOS1	P29475	1434 aa		13.06	□□□□□ -0.32
ACSF2-223	ENST00000513101	SLC52A1	Q9NWF4	448 aa		13.06	□□□□□ -0.32
ACSF2-223	ENST00000513101	EFCAB6	Q5THR3	1501 aa		13.06	□□□□□ -0.32
ACSF2-223	ENST00000513101	CEP152	O94986	1710 aa		13.05	□□□□□ -0.32
ACSF2-223	ENST00000513101	PKD2	Q13563	968 aa		13.05	□□□□□ -0.32
ACSF2-223	ENST00000513101	PLA2R1	Q13018	1463 aa		13.04	□□□□□ -0.32
ACSF2-223	ENST00000513101	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.04	□□□□□ -0.32
ACSF2-223	ENST00000513101	IDI1	Q13907	227 aa		13.04	□□□□□ -0.32
ACSF2-223	ENST00000513101	TRIM52	Q96A61	297 aa		13.04	□□□□□ -0.32
ACSF2-223	ENST00000513101	IQGAP3	Q86VI3	1631 aa		13.03	□□□□□ -0.32
ACSF2-223	ENST00000513101	MYO3A	Q8NEV4	1616 aa		13.03	□□□□□ -0.32
ACSF2-223	ENST00000513101	SETD5	Q9C0A6	1442 aa		13.03	□□□□□ -0.32
ACSF2-223	ENST00000513101	TET3	O43151	1660 aa		13.02	□□□□□ -0.32
ACSF2-223	ENST00000513101	GCC2	Q8IWJ2	1684 aa		13.02	□□□□□ -0.32
ACSF2-223	ENST00000513101	HRC	P23327	699 aa		13.02	□□□□□ -0.33
ACSF2-223	ENST00000513101	ZNF142	P52746	1687 aa	Predicted RBP	13.02	□□□□□ -0.33
ACSF2-223	ENST00000513101	ANKLE2	Q86XL3	938 aa		13.01	□□□□□ -0.33
ACSF2-223	ENST00000513101	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.01	□□□□□ -0.33
ACSF2-223	ENST00000513101	PTPRT	O14522	1441 aa		13.01	□□□□□ -0.33
ACSF2-223	ENST00000513101	UGGT1	Q9NYU2	1555 aa		13.01	□□□□□ -0.33
ACSF2-223	ENST00000513101	NCKAP5L	Q9HCH0	1330 aa		13	□□□□□ -0.33
ACSF2-223	ENST00000513101	STAG3	Q9UJ98	1225 aa		12.99	□□□□□ -0.33
ACSF2-223	ENST00000513101	RAB3GAP2	Q9H2M9	1393 aa		12.97	□□□□□ -0.33
ACSF2-223	ENST00000513101	SYNM	O15061	1565 aa		12.97	□□□□□ -0.33
ACSF2-223	ENST00000513101	MPHOSPH9	Q99550	1183 aa		12.96	□□□□□ -0.33
ACSF2-223	ENST00000513101	TMEM2	Q9UHN6	1383 aa		12.95	□□□□□ -0.34
ACSF2-223	ENST00000513101	STRC	Q7RTU9	1775 aa		12.95	□□□□□ -0.34
ACSF2-223	ENST00000513101	TXNDC2	Q86VQ3	553 aa		12.95	□□□□□ -0.34
ACSF2-223	ENST00000513101	EID1	Q9Y6B2	187 aa		12.95	□□□□□ -0.34
ACSF2-223	ENST00000513101	ARHGAP23	Q9P227	1491 aa		12.95	□□□□□ -0.34
ACSF2-223	ENST00000513101		E9PCH4	1651 aa		12.95	□□□□□ -0.34
ACSF2-223	ENST00000513101	CFAP65	Q6ZU64	1925 aa	Known RBP	12.94	□□□□□ -0.34
ACSF2-223	ENST00000513101	MED14	O60244	1454 aa		12.94	□□□□□ -0.34
ACSF2-223	ENST00000513101	LTK	P29376	864 aa		12.94	□□□□□ -0.34
ACSF2-223	ENST00000513101	HDGF	P51858	240 aa	Known RBP	12.94	□□□□□ -0.34
ACSF2-223	ENST00000513101	SLIT1	O75093	1534 aa		12.93	□□□□□ -0.34
ACSF2-223	ENST00000513101	CLSPN	Q9HAW4	1339 aa		12.92	□□□□□ -0.34
ACSF2-223	ENST00000513101	CERK	Q8TCT0	537 aa		12.92	□□□□□ -0.34
ACSF2-223	ENST00000513101	KDM5A	P29375	1690 aa	Known RBP	12.92	□□□□□ -0.34
ACSF2-223	ENST00000513101	PIK3C2B	O00750	1634 aa		12.91	□□□□□ -0.34
ACSF2-223	ENST00000513101	UBR1	Q8IWV7	1749 aa		12.91	□□□□□ -0.34
ACSF2-223	ENST00000513101	NPHP4	O75161	1426 aa	Predicted RBP	12.91	□□□□□ -0.34
ACSF2-223	ENST00000513101	CHGA	P10645	457 aa	Known RBP	12.91	□□□□□ -0.34
ACSF2-223	ENST00000513101	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.91	□□□□□ -0.34
ACSF2-223	ENST00000513101	ADGRB3	O60242	1522 aa		12.91	□□□□□ -0.34
ACSF2-223	ENST00000513101	SCAF11	Q99590	1463 aa	Known RBP	12.91	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms