RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 MIER1Q8N108 512 aa17.95■□□□□ 0.46
PRDM16-205ENST00000509860 FRMPD1Q5SYB0 1578 aa17.94■□□□□ 0.46
PRDM16-205ENST00000509860 CD109Q6YHK3 1445 aa17.94■□□□□ 0.46
PRDM16-205ENST00000509860 EIF2AK4Q9P2K8 1649 aaKnown RBP17.94■□□□□ 0.46
PRDM16-205ENST00000509860 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
PRDM16-205ENST00000509860 GLI2P10070 1586 aa17.93■□□□□ 0.46
PRDM16-205ENST00000509860 RICTORQ6R327 1708 aa17.93■□□□□ 0.46
PRDM16-205ENST00000509860 DIP2BQ9P265 1576 aa17.92■□□□□ 0.46
PRDM16-205ENST00000509860 HIRIP3Q9BW71 556 aaPredicted RBP17.92■□□□□ 0.46
PRDM16-205ENST00000509860 ABCA6Q8N139 1617 aa17.91■□□□□ 0.46
PRDM16-205ENST00000509860 POGZQ7Z3K3 1410 aa17.91■□□□□ 0.46
PRDM16-205ENST00000509860 SPAG9O60271 1321 aaKnown RBP17.9■□□□□ 0.46
PRDM16-205ENST00000509860 PRDM15P57071 1507 aaPredicted RBP17.9■□□□□ 0.46
PRDM16-205ENST00000509860 ZNF518AQ6AHZ1 1483 aa17.89■□□□□ 0.45
PRDM16-205ENST00000509860 CYB5RLQ6IPT4 315 aa17.88■□□□□ 0.45
PRDM16-205ENST00000509860 HECW2Q9P2P5 1572 aa17.88■□□□□ 0.45
PRDM16-205ENST00000509860 BCORL1Q5H9F3 1711 aa17.88■□□□□ 0.45
PRDM16-205ENST00000509860 RNF17Q9BXT8 1623 aaKnown RBP17.87■□□□□ 0.45
PRDM16-205ENST00000509860 ATP10AO60312 1499 aa17.87■□□□□ 0.45
PRDM16-205ENST00000509860 TET3O43151 1660 aa17.87■□□□□ 0.45
PRDM16-205ENST00000509860 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
PRDM16-205ENST00000509860 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
PRDM16-205ENST00000509860 POLR1AO95602 1720 aaPredicted RBP17.85■□□□□ 0.45
PRDM16-205ENST00000509860 SPATA31E1Q6ZUB1 1445 aa17.85■□□□□ 0.45
PRDM16-205ENST00000509860 NEO1Q92859 1461 aa17.85■□□□□ 0.45
PRDM16-205ENST00000509860 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
PRDM16-205ENST00000509860 UHRF1BP1Q6BDS2 1440 aa17.84■□□□□ 0.45
PRDM16-205ENST00000509860 MLH3Q9UHC1 1453 aa17.84■□□□□ 0.45
PRDM16-205ENST00000509860 CEP152O94986 1710 aa17.83■□□□□ 0.45
PRDM16-205ENST00000509860 DIP2CQ9Y2E4 1556 aa17.82■□□□□ 0.44
PRDM16-205ENST00000509860 DHX29Q7Z478 1369 aaKnown RBP17.81■□□□□ 0.44
PRDM16-205ENST00000509860 CLTCL1P53675 1640 aa17.81■□□□□ 0.44
PRDM16-205ENST00000509860 TRPM1Q7Z4N2 1603 aa17.81■□□□□ 0.44
PRDM16-205ENST00000509860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.81■□□□□ 0.44
PRDM16-205ENST00000509860 TRPM2O94759 1503 aa17.8■□□□□ 0.44
PRDM16-205ENST00000509860 TSPOAP1O95153 1857 aa17.8■□□□□ 0.44
PRDM16-205ENST00000509860 A2MP01023 1474 aa17.79■□□□□ 0.44
PRDM16-205ENST00000509860 HSPA5P11021 654 aaKnown RBP17.78■□□□□ 0.44
PRDM16-205ENST00000509860 PTPRTO14522 1441 aa17.77■□□□□ 0.44
PRDM16-205ENST00000509860 RALGAPBQ86X10 1494 aa17.77■□□□□ 0.44
PRDM16-205ENST00000509860 EFCAB6Q5THR3 1501 aa17.77■□□□□ 0.44
PRDM16-205ENST00000509860 SIGLEC1Q9BZZ2 1709 aa17.77■□□□□ 0.43
PRDM16-205ENST00000509860 LMTK2Q8IWU2 1503 aa17.76■□□□□ 0.43
PRDM16-205ENST00000509860 C11orf95C9JLR9 678 aaPredicted RBP17.75■□□□□ 0.43
PRDM16-205ENST00000509860 CCDC144AA2RUR9 1427 aa17.75■□□□□ 0.43
PRDM16-205ENST00000509860 WASHC2AQ641Q2 1341 aa17.74■□□□□ 0.43
PRDM16-205ENST00000509860 RAPGEF3O95398 923 aa17.73■□□□□ 0.43
PRDM16-205ENST00000509860 UGGT1Q9NYU2 1555 aa17.73■□□□□ 0.43
PRDM16-205ENST00000509860 MROH2AA6NES4 1674 aa17.73■□□□□ 0.43
PRDM16-205ENST00000509860 ZMYM4Q5VZL5 1548 aa17.73■□□□□ 0.43
PRDM16-205ENST00000509860 DDX10Q13206 875 aaKnown RBP17.72■□□□□ 0.43
PRDM16-205ENST00000509860 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
PRDM16-205ENST00000509860 YEATS2Q9ULM3 1422 aa17.71■□□□□ 0.43
PRDM16-205ENST00000509860 IFT172Q9UG01 1749 aa17.71■□□□□ 0.43
PRDM16-205ENST00000509860 MADDQ8WXG6 1647 aa17.7■□□□□ 0.42
PRDM16-205ENST00000509860 CAMSAP1Q5T5Y3 1602 aa17.69■□□□□ 0.42
PRDM16-205ENST00000509860 KIF3BO15066 747 aa17.69■□□□□ 0.42
PRDM16-205ENST00000509860 LAMC1P11047 1609 aa17.68■□□□□ 0.42
PRDM16-205ENST00000509860 ABCC3O15438 1527 aa17.68■□□□□ 0.42
PRDM16-205ENST00000509860 NEURL4Q96JN8 1562 aa17.67■□□□□ 0.42
PRDM16-205ENST00000509860 EIF4G2P78344 907 aaKnown RBP eCLIP17.66■□□□□ 0.42
PRDM16-205ENST00000509860 FAM69CQ0P6D2 419 aa17.65■□□□□ 0.42
PRDM16-205ENST00000509860 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.42
PRDM16-205ENST00000509860 USP47Q96K76 1375 aa17.64■□□□□ 0.41
PRDM16-205ENST00000509860 COL17A1Q9UMD9 1497 aaPredicted RBP17.64■□□□□ 0.41
PRDM16-205ENST00000509860 CCDC7Q96M83 1385 aa17.63■□□□□ 0.41
PRDM16-205ENST00000509860 NPATQ14207 1427 aa17.62■□□□□ 0.41
PRDM16-205ENST00000509860 KIF1BO60333 1816 aa17.62■□□□□ 0.41
PRDM16-205ENST00000509860 ZC3H13Q5T200 1668 aaKnown RBP17.62■□□□□ 0.41
PRDM16-205ENST00000509860 PIK3C2BO00750 1634 aa17.62■□□□□ 0.41
PRDM16-205ENST00000509860 ZNF326Q5BKZ1 582 aaKnown RBP17.61■□□□□ 0.41
PRDM16-205ENST00000509860 CFAP65Q6ZU64 1925 aaKnown RBP17.61■□□□□ 0.41
PRDM16-205ENST00000509860 SYNMO15061 1565 aa17.61■□□□□ 0.41
PRDM16-205ENST00000509860 KDM2AQ9Y2K7 1162 aa17.61■□□□□ 0.41
PRDM16-205ENST00000509860 GPRASP1Q5JY77 1395 aa17.6■□□□□ 0.41
PRDM16-205ENST00000509860 IQGAP1P46940 1657 aa17.6■□□□□ 0.41
PRDM16-205ENST00000509860 ADGRB3O60242 1522 aa17.6■□□□□ 0.41
PRDM16-205ENST00000509860 REREQ9P2R6 1566 aa17.59■□□□□ 0.41
PRDM16-205ENST00000509860 KIF7Q2M1P5 1343 aa17.59■□□□□ 0.41
PRDM16-205ENST00000509860 KANK1Q14678 1352 aa17.59■□□□□ 0.41
PRDM16-205ENST00000509860 RGL3Q3MIN7 710 aa17.59■□□□□ 0.41
PRDM16-205ENST00000509860 MYT1LQ9UL68 1186 aa17.58■□□□□ 0.41
PRDM16-205ENST00000509860 CNTLNQ9NXG0 1405 aa17.58■□□□□ 0.4
PRDM16-205ENST00000509860 PPLO60437 1756 aa17.57■□□□□ 0.4
PRDM16-205ENST00000509860 NBPF1Q3BBV0 1214 aa17.57■□□□□ 0.4
PRDM16-205ENST00000509860 KIAA1210Q9ULL0 1709 aa17.55■□□□□ 0.4
PRDM16-205ENST00000509860 ERICH6Q7L0X2 663 aa17.55■□□□□ 0.4
PRDM16-205ENST00000509860 PREX1Q8TCU6 1659 aa17.53■□□□□ 0.4
PRDM16-205ENST00000509860 NRXN1Q9ULB1 1477 aa17.53■□□□□ 0.4
PRDM16-205ENST00000509860 NOS1P29475 1434 aa17.53■□□□□ 0.4
PRDM16-205ENST00000509860 ROCK2O75116 1388 aaKnown RBP17.53■□□□□ 0.4
PRDM16-205ENST00000509860 ARHGEF40Q8TER5 1519 aa17.53■□□□□ 0.4
PRDM16-205ENST00000509860 MYO5BQ9ULV0 1848 aa17.53■□□□□ 0.4
PRDM16-205ENST00000509860 MYOM2P54296 1465 aa17.52■□□□□ 0.39
PRDM16-205ENST00000509860 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
PRDM16-205ENST00000509860 GGT6Q6P531 493 aa17.5■□□□□ 0.39
PRDM16-205ENST00000509860 AGLP35573 1532 aa17.5■□□□□ 0.39
PRDM16-205ENST00000509860 ARHGAP31Q2M1Z3 1444 aa17.49■□□□□ 0.39
PRDM16-205ENST00000509860 CLTCQ00610 1675 aaKnown RBP17.48■□□□□ 0.39
PRDM16-205ENST00000509860 ST20-MTHFSA0A0A6YYL1 179 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms