RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 KIF15Q9NS87 1388 aa25.01■■□□□ 1.59
SKP2-205ENST00000509692 PREX1Q8TCU6 1659 aa25■■□□□ 1.59
SKP2-205ENST00000509692 HSPA2P54652 639 aa24.99■■□□□ 1.59
SKP2-205ENST00000509692 EIF2AK4Q9P2K8 1649 aaKnown RBP24.98■■□□□ 1.59
SKP2-205ENST00000509692 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.98■■□□□ 1.59
SKP2-205ENST00000509692 RNF17Q9BXT8 1623 aaKnown RBP24.97■■□□□ 1.59
SKP2-205ENST00000509692 NCOA1Q15788 1441 aa24.96■■□□□ 1.59
SKP2-205ENST00000509692 ANKRD30AQ9BXX3 1397 aa24.95■■□□□ 1.58
SKP2-205ENST00000509692 KDM5DQ9BY66 1539 aa24.94■■□□□ 1.58
SKP2-205ENST00000509692 WASHC2CQ9Y4E1 1318 aa24.94■■□□□ 1.58
SKP2-205ENST00000509692 NPATQ14207 1427 aa24.93■■□□□ 1.58
SKP2-205ENST00000509692 PTPRKQ15262 1439 aa24.93■■□□□ 1.58
SKP2-205ENST00000509692 UHRF1BP1Q6BDS2 1440 aa24.93■■□□□ 1.58
SKP2-205ENST00000509692 MROH1Q8NDA8 1641 aa24.93■■□□□ 1.58
SKP2-205ENST00000509692 ADGRL2O95490 1459 aa24.92■■□□□ 1.58
SKP2-205ENST00000509692 ERBINQ96RT1 1412 aa24.92■■□□□ 1.58
SKP2-205ENST00000509692 FAM135AQ9P2D6 1515 aa24.92■■□□□ 1.58
SKP2-205ENST00000509692 ABCC3O15438 1527 aa24.87■■□□□ 1.57
SKP2-205ENST00000509692 ITGAEP38570 1179 aa24.86■■□□□ 1.57
SKP2-205ENST00000509692 FBXO31Q5XUX0 539 aaPredicted RBP24.86■■□□□ 1.57
SKP2-205ENST00000509692 PZPP20742 1482 aa24.85■■□□□ 1.57
SKP2-205ENST00000509692 ZC3H13Q5T200 1668 aaKnown RBP24.85■■□□□ 1.57
SKP2-205ENST00000509692 CEP152O94986 1710 aa24.84■■□□□ 1.57
SKP2-205ENST00000509692 PRDM15P57071 1507 aaPredicted RBP24.84■■□□□ 1.57
SKP2-205ENST00000509692 DEPDC5O75140 1603 aa24.83■■□□□ 1.57
SKP2-205ENST00000509692 MYO3AQ8NEV4 1616 aa24.82■■□□□ 1.56
SKP2-205ENST00000509692 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.81■■□□□ 1.561e-6■■□□□ 12.2
SKP2-205ENST00000509692 ANKRD50Q9ULJ7 1429 aa24.8■■□□□ 1.56
SKP2-205ENST00000509692 ROCK1Q13464 1354 aa24.79■■□□□ 1.56
SKP2-205ENST00000509692 STRCQ7RTU9 1775 aa24.78■■□□□ 1.56
SKP2-205ENST00000509692 CAMSAP1Q5T5Y3 1602 aa24.78■■□□□ 1.56
SKP2-205ENST00000509692 ZNF142P52746 1687 aaPredicted RBP24.77■■□□□ 1.56
SKP2-205ENST00000509692 TNRQ92752 1358 aa24.77■■□□□ 1.56
SKP2-205ENST00000509692 CFAP65Q6ZU64 1925 aaKnown RBP24.76■■□□□ 1.55
SKP2-205ENST00000509692 CEP170BQ9Y4F5 1589 aaPredicted RBP24.76■■□□□ 1.55
SKP2-205ENST00000509692 VWDEQ8N2E2 1590 aa24.74■■□□□ 1.55
SKP2-205ENST00000509692 KANK1Q14678 1352 aa24.72■■□□□ 1.55
SKP2-205ENST00000509692 SPATA31D1Q6ZQQ2 1576 aa24.71■■□□□ 1.55
SKP2-205ENST00000509692 A2ML1A8K2U0 1454 aa24.71■■□□□ 1.55
SKP2-205ENST00000509692 ARHGAP31Q2M1Z3 1444 aa24.7■■□□□ 1.55
SKP2-205ENST00000509692 ERVK-7P63135 1459 aa24.7■■□□□ 1.54
SKP2-205ENST00000509692 LMTK2Q8IWU2 1503 aa24.69■■□□□ 1.54
SKP2-205ENST00000509692 NLRP1Q9C000 1473 aa24.65■■□□□ 1.54
SKP2-205ENST00000509692 UNC13BO14795 1591 aa24.64■■□□□ 1.54
SKP2-205ENST00000509692 TRIM26Q12899 539 aaPredicted RBP24.63■■□□□ 1.53
SKP2-205ENST00000509692 DMRT2Q9Y5R5 561 aa24.63■■□□□ 1.53
SKP2-205ENST00000509692 PLA2R1Q13018 1463 aa24.63■■□□□ 1.53
SKP2-205ENST00000509692 NCKAP5LQ9HCH0 1330 aa24.62■■□□□ 1.53
SKP2-205ENST00000509692 EFCAB6Q5THR3 1501 aa24.62■■□□□ 1.53
SKP2-205ENST00000509692 GCC2Q8IWJ2 1684 aa24.62■■□□□ 1.53
SKP2-205ENST00000509692 UGGT1Q9NYU2 1555 aa24.6■■□□□ 1.53
SKP2-205ENST00000509692 HFM1A2PYH4 1435 aa24.6■■□□□ 1.53
SKP2-205ENST00000509692 PTPRTO14522 1441 aa24.59■■□□□ 1.53
SKP2-205ENST00000509692 NAIPQ13075 1403 aa24.59■■□□□ 1.53
SKP2-205ENST00000509692 TET3O43151 1660 aa24.57■■□□□ 1.52
SKP2-205ENST00000509692 PKD2Q13563 968 aa24.56■■□□□ 1.52
SKP2-205ENST00000509692 THEMISQ8N1K5 641 aaPredicted RBP24.56■■□□□ 1.52
SKP2-205ENST00000509692 IQGAP3Q86VI3 1631 aa24.55■■□□□ 1.52
SKP2-205ENST00000509692 NUP155O75694 1391 aa24.55■■□□□ 1.52
SKP2-205ENST00000509692 NOS1P29475 1434 aa24.54■■□□□ 1.52
SKP2-205ENST00000509692 SYNMO15061 1565 aa24.54■■□□□ 1.52
SKP2-205ENST00000509692 UBR1Q8IWV7 1749 aa24.53■■□□□ 1.52
SKP2-205ENST00000509692 RPRD2Q5VT52 1461 aaKnown RBP24.52■■□□□ 1.52
SKP2-205ENST00000509692 POLR1AO95602 1720 aaPredicted RBP24.51■■□□□ 1.51
SKP2-205ENST00000509692 PIK3C2BO00750 1634 aa24.5■■□□□ 1.51
SKP2-205ENST00000509692 E9PCH4 1651 aa24.5■■□□□ 1.51
SKP2-205ENST00000509692 IDI1Q13907 227 aa24.5■■□□□ 1.51
SKP2-205ENST00000509692 NEURL4Q96JN8 1562 aa24.49■■□□□ 1.51
SKP2-205ENST00000509692 SETD5Q9C0A6 1442 aa24.49■■□□□ 1.51
SKP2-205ENST00000509692 ANKLE2Q86XL3 938 aa24.48■■□□□ 1.51
SKP2-205ENST00000509692 ILDR1Q86SU0 546 aaPredicted RBP24.43■■□□□ 1.5
SKP2-205ENST00000509692 SLC52A1Q9NWF4 448 aa24.43■■□□□ 1.5
SKP2-205ENST00000509692 CERKQ8TCT0 537 aa24.43■■□□□ 1.5
SKP2-205ENST00000509692 KDM5AP29375 1690 aaKnown RBP24.42■■□□□ 1.5
SKP2-205ENST00000509692 MED14O60244 1454 aa24.41■■□□□ 1.5
SKP2-205ENST00000509692 SLIT1O75093 1534 aa24.41■■□□□ 1.5
SKP2-205ENST00000509692 LTBP4Q8N2S1 1624 aa24.41■■□□□ 1.5
SKP2-205ENST00000509692 RAB3GAP2Q9H2M9 1393 aa24.41■■□□□ 1.5
SKP2-205ENST00000509692 ARHGAP23Q9P227 1491 aa24.41■■□□□ 1.5
SKP2-205ENST00000509692 STAG3Q9UJ98 1225 aa24.41■■□□□ 1.5
SKP2-205ENST00000509692 ZNF335Q9H4Z2 1342 aaPredicted RBP24.39■■□□□ 1.5
SKP2-205ENST00000509692 LTKP29376 864 aa24.39■■□□□ 1.5
SKP2-205ENST00000509692 NPHP4O75161 1426 aaPredicted RBP24.39■■□□□ 1.49
SKP2-205ENST00000509692 ADGRB3O60242 1522 aa24.38■■□□□ 1.49
SKP2-205ENST00000509692 TMEM2Q9UHN6 1383 aa24.38■■□□□ 1.49
SKP2-205ENST00000509692 TXNDC2Q86VQ3 553 aa24.36■■□□□ 1.49
SKP2-205ENST00000509692 TRIM52Q96A61 297 aa24.36■■□□□ 1.49
SKP2-205ENST00000509692 SCAF11Q99590 1463 aaKnown RBP24.36■■□□□ 1.49
SKP2-205ENST00000509692 IQGAP1P46940 1657 aa24.36■■□□□ 1.49
SKP2-205ENST00000509692 MYO5BQ9ULV0 1848 aa24.36■■□□□ 1.49
SKP2-205ENST00000509692 PCGF6Q9BYE7 350 aa24.35■■□□□ 1.49
SKP2-205ENST00000509692 FBXO41Q8TF61 875 aa24.34■■□□□ 1.49
SKP2-205ENST00000509692 ACIN1Q9UKV3 1341 aaKnown RBP24.33■■□□□ 1.49
SKP2-205ENST00000509692 TMEM131LA2VDJ0 1609 aa24.33■■□□□ 1.49
SKP2-205ENST00000509692 SPHKAPQ2M3C7 1700 aa24.33■■□□□ 1.49
SKP2-205ENST00000509692 HRCP23327 699 aa24.32■■□□□ 1.48
SKP2-205ENST00000509692 EID1Q9Y6B2 187 aa24.32■■□□□ 1.48
SKP2-205ENST00000509692 CHGAP10645 457 aaKnown RBP24.28■■□□□ 1.48
SKP2-205ENST00000509692 SLC4A1APQ9BWU0 796 aaKnown RBP24.28■■□□□ 1.48
SKP2-205ENST00000509692 ZFYVE9O95405 1425 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms