RNA–Protein interactions for RNA: ENST00000509507.5

CALCOCO2-215, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-215ENST00000509507 PTPRMP28827 1452 aa12.51□□□□□ -0.41
CALCOCO2-215ENST00000509507 AGLP35573 1532 aa12.51□□□□□ -0.41
CALCOCO2-215ENST00000509507 DNMT1P26358 1616 aaKnown RBP12.5□□□□□ -0.41
CALCOCO2-215ENST00000509507 MAST1Q9Y2H9 1570 aa12.5□□□□□ -0.41
CALCOCO2-215ENST00000509507 A2MP01023 1474 aa12.5□□□□□ -0.41
CALCOCO2-215ENST00000509507 RTEL1-TNFRSF6BF6WH68 1400 aa12.49□□□□□ -0.41
CALCOCO2-215ENST00000509507 TCOF1Q13428 1488 aaKnown RBP12.49□□□□□ -0.41
CALCOCO2-215ENST00000509507 DEKP35659 375 aaKnown RBP12.47□□□□□ -0.41
CALCOCO2-215ENST00000509507 RSPH4AQ5TD94 716 aa12.47□□□□□ -0.41
CALCOCO2-215ENST00000509507 SHANK2Q9UPX8 1470 aa12.46□□□□□ -0.41
CALCOCO2-215ENST00000509507 CCER2I3L3R5 266 aa12.45□□□□□ -0.42
CALCOCO2-215ENST00000509507 C3P01024 1663 aa12.45□□□□□ -0.42
CALCOCO2-215ENST00000509507 CLTCQ00610 1675 aaKnown RBP12.45□□□□□ -0.42
CALCOCO2-215ENST00000509507 DAPK1P53355 1430 aa12.45□□□□□ -0.42
CALCOCO2-215ENST00000509507 TSPY4P0CV99 314 aa12.44□□□□□ -0.42
CALCOCO2-215ENST00000509507 TSPY10P0CW01 314 aa12.44□□□□□ -0.42
CALCOCO2-215ENST00000509507 ABCC5O15440 1437 aa12.44□□□□□ -0.42
CALCOCO2-215ENST00000509507 MROH2AA6NES4 1674 aa12.44□□□□□ -0.42
CALCOCO2-215ENST00000509507 PLPPR3Q6T4P5 718 aa12.43□□□□□ -0.42
CALCOCO2-215ENST00000509507 EIF2AK4Q9P2K8 1649 aaKnown RBP12.42□□□□□ -0.42
CALCOCO2-215ENST00000509507 BCANQ96GW7 911 aa12.42□□□□□ -0.42
CALCOCO2-215ENST00000509507 DHX29Q7Z478 1369 aaKnown RBP12.42□□□□□ -0.42
CALCOCO2-215ENST00000509507 FAM50AQ14320 339 aaKnown RBP12.42□□□□□ -0.42
CALCOCO2-215ENST00000509507 UBE2Q2Q8WVN8 375 aa12.42□□□□□ -0.42
CALCOCO2-215ENST00000509507 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
CALCOCO2-215ENST00000509507 DUOX2Q9NRD8 1548 aa12.4□□□□□ -0.42
CALCOCO2-215ENST00000509507 PREX1Q8TCU6 1659 aa12.4□□□□□ -0.42
CALCOCO2-215ENST00000509507 ESF1Q9H501 851 aaKnown RBP12.39□□□□□ -0.43
CALCOCO2-215ENST00000509507 KIF15Q9NS87 1388 aa12.39□□□□□ -0.43
CALCOCO2-215ENST00000509507 CNTLNQ9NXG0 1405 aa12.39□□□□□ -0.43
CALCOCO2-215ENST00000509507 GGT6Q6P531 493 aa12.38□□□□□ -0.43
CALCOCO2-215ENST00000509507 KDM5DQ9BY66 1539 aa12.37□□□□□ -0.43
CALCOCO2-215ENST00000509507 CEP152O94986 1710 aa12.37□□□□□ -0.43
CALCOCO2-215ENST00000509507 KIF3BO15066 747 aa12.37□□□□□ -0.43
CALCOCO2-215ENST00000509507 ADGRL2O95490 1459 aa12.37□□□□□ -0.43
CALCOCO2-215ENST00000509507 CEBPAP49715 358 aaPredicted RBP12.37□□□□□ -0.43
CALCOCO2-215ENST00000509507 ZC3H13Q5T200 1668 aaKnown RBP12.37□□□□□ -0.43
CALCOCO2-215ENST00000509507 MROH1Q8NDA8 1641 aa12.37□□□□□ -0.43
CALCOCO2-215ENST00000509507 LMTK3Q96Q04 1460 aa12.37□□□□□ -0.43
CALCOCO2-215ENST00000509507 CHIC2Q9UKJ5 165 aa12.37□□□□□ -0.43
CALCOCO2-215ENST00000509507 ERBINQ96RT1 1412 aa12.36□□□□□ -0.43
CALCOCO2-215ENST00000509507 DEPDC5O75140 1603 aa12.35□□□□□ -0.43
CALCOCO2-215ENST00000509507 FAM135AQ9P2D6 1515 aa12.35□□□□□ -0.43
CALCOCO2-215ENST00000509507 RRBP1Q9P2E9 1410 aaKnown RBP12.35□□□□□ -0.43
CALCOCO2-215ENST00000509507 ANKRD30AQ9BXX3 1397 aa12.35□□□□□ -0.43
CALCOCO2-215ENST00000509507 PHF23Q9BUL5 403 aaPredicted RBP12.35□□□□□ -0.43
CALCOCO2-215ENST00000509507 RRP7BPQ9NSQ0 103 aa12.35□□□□□ -0.43
CALCOCO2-215ENST00000509507 ANO8Q9HCE9 1232 aaPredicted RBP12.34□□□□□ -0.43
CALCOCO2-215ENST00000509507 PRDM15P57071 1507 aaPredicted RBP12.34□□□□□ -0.43
CALCOCO2-215ENST00000509507 PTPRKQ15262 1439 aa12.34□□□□□ -0.43
CALCOCO2-215ENST00000509507 NCOA1Q15788 1441 aa12.34□□□□□ -0.43
CALCOCO2-215ENST00000509507 SETD1BQ9UPS6 1966 aaKnown RBP12.33□□□□□ -0.44
CALCOCO2-215ENST00000509507 CAMSAP1Q5T5Y3 1602 aa12.33□□□□□ -0.44
CALCOCO2-215ENST00000509507 MYO3AQ8NEV4 1616 aa12.33□□□□□ -0.44
CALCOCO2-215ENST00000509507 ZMYM3Q14202 1370 aa12.32□□□□□ -0.44
CALCOCO2-215ENST00000509507 ABCC3O15438 1527 aa12.32□□□□□ -0.44
CALCOCO2-215ENST00000509507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.31□□□□□ -0.44
CALCOCO2-215ENST00000509507 ITGAEP38570 1179 aa12.31□□□□□ -0.44
CALCOCO2-215ENST00000509507 UHRF1BP1Q6BDS2 1440 aa12.31□□□□□ -0.44
CALCOCO2-215ENST00000509507 ZNF142P52746 1687 aaPredicted RBP12.3□□□□□ -0.44
CALCOCO2-215ENST00000509507 TIMELESSQ9UNS1 1208 aa12.3□□□□□ -0.44
CALCOCO2-215ENST00000509507 PPP6R1Q9UPN7 881 aa12.3□□□□□ -0.44
CALCOCO2-215ENST00000509507 NPATQ14207 1427 aa12.3□□□□□ -0.44
CALCOCO2-215ENST00000509507 WASHC2CQ9Y4E1 1318 aa12.29□□□□□ -0.44
CALCOCO2-215ENST00000509507 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
CALCOCO2-215ENST00000509507 CFAP65Q6ZU64 1925 aaKnown RBP12.29□□□□□ -0.44
CALCOCO2-215ENST00000509507 PZPP20742 1482 aa12.29□□□□□ -0.44
CALCOCO2-215ENST00000509507 ANKRD50Q9ULJ7 1429 aa12.28□□□□□ -0.44
CALCOCO2-215ENST00000509507 ROCK1Q13464 1354 aa12.27□□□□□ -0.44
CALCOCO2-215ENST00000509507 GCC2Q8IWJ2 1684 aa12.27□□□□□ -0.45
CALCOCO2-215ENST00000509507 HSPA2P54652 639 aa12.27□□□□□ -0.45
CALCOCO2-215ENST00000509507 UNC13BO14795 1591 aa12.26□□□□□ -0.45
CALCOCO2-215ENST00000509507 CEP170BQ9Y4F5 1589 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO2-215ENST00000509507 VWDEQ8N2E2 1590 aa12.26□□□□□ -0.45
CALCOCO2-215ENST00000509507 PPP1R15AO75807 674 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO2-215ENST00000509507 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.26□□□□□ -0.452e-10■■□□□ 14.5
CALCOCO2-215ENST00000509507 PPP4R2Q9NY27 417 aa12.26□□□□□ -0.45
CALCOCO2-215ENST00000509507 SOCS7O14512 581 aa12.25□□□□□ -0.45
CALCOCO2-215ENST00000509507 KANK1Q14678 1352 aa12.24□□□□□ -0.45
CALCOCO2-215ENST00000509507 STRCQ7RTU9 1775 aa12.23□□□□□ -0.45
CALCOCO2-215ENST00000509507 EFCAB6Q5THR3 1501 aa12.23□□□□□ -0.45
CALCOCO2-215ENST00000509507 SALL2Q9Y467 1007 aaPredicted RBP12.23□□□□□ -0.45
CALCOCO2-215ENST00000509507 SPATA31D1Q6ZQQ2 1576 aa12.23□□□□□ -0.45
CALCOCO2-215ENST00000509507 LMTK2Q8IWU2 1503 aa12.23□□□□□ -0.45
CALCOCO2-215ENST00000509507 ANP32CO43423 234 aa12.22□□□□□ -0.45
CALCOCO2-215ENST00000509507 RTL5Q5HYW3 569 aaPredicted RBP12.22□□□□□ -0.45
CALCOCO2-215ENST00000509507 FBXO31Q5XUX0 539 aaPredicted RBP12.22□□□□□ -0.45
CALCOCO2-215ENST00000509507 ERVK-7P63135 1459 aa12.22□□□□□ -0.45
CALCOCO2-215ENST00000509507 TET3O43151 1660 aa12.22□□□□□ -0.45
CALCOCO2-215ENST00000509507 TNRQ92752 1358 aa12.22□□□□□ -0.45
CALCOCO2-215ENST00000509507 C11orf95C9JLR9 678 aaPredicted RBP12.21□□□□□ -0.45
CALCOCO2-215ENST00000509507 FBXO41Q8TF61 875 aa12.21□□□□□ -0.45
CALCOCO2-215ENST00000509507 IQGAP3Q86VI3 1631 aa12.21□□□□□ -0.45
CALCOCO2-215ENST00000509507 A2ML1A8K2U0 1454 aa12.2□□□□□ -0.46
CALCOCO2-215ENST00000509507 SENP3Q9H4L4 574 aaPredicted RBP12.2□□□□□ -0.46
CALCOCO2-215ENST00000509507 ARHGAP31Q2M1Z3 1444 aa12.19□□□□□ -0.46
CALCOCO2-215ENST00000509507 POLR1AO95602 1720 aaPredicted RBP12.19□□□□□ -0.46
CALCOCO2-215ENST00000509507 NAIPQ13075 1403 aa12.19□□□□□ -0.46
CALCOCO2-215ENST00000509507 NLRP1Q9C000 1473 aa12.18□□□□□ -0.46
CALCOCO2-215ENST00000509507 USP35Q9P2H5 1018 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms