RNA–Protein interactions for RNA: ENST00000508679.5

CALCOCO2-211, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2 BASIC

Gene CALCOCO2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-211ENST00000508679 FER1L4A9Z1Z3 1794 aa22.67■■□□□ 1.22
CALCOCO2-211ENST00000508679 UNC13BO14795 1591 aa22.67■■□□□ 1.22
CALCOCO2-211ENST00000508679 KIF3BO15066 747 aa22.66■■□□□ 1.22
CALCOCO2-211ENST00000508679 ARID4BQ4LE39 1312 aaPredicted RBP22.65■■□□□ 1.22
CALCOCO2-211ENST00000508679 KDM5DQ9BY66 1539 aa22.65■■□□□ 1.22
CALCOCO2-211ENST00000508679 FAM135AQ9P2D6 1515 aa22.63■■□□□ 1.21
CALCOCO2-211ENST00000508679 MROH2AA6NES4 1674 aa22.61■■□□□ 1.21
CALCOCO2-211ENST00000508679 CLTCQ00610 1675 aaKnown RBP22.61■■□□□ 1.21
CALCOCO2-211ENST00000508679 RIMS1Q86UR5 1692 aaKnown RBP22.61■■□□□ 1.21
CALCOCO2-211ENST00000508679 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
CALCOCO2-211ENST00000508679 CEP152O94986 1710 aa22.6■■□□□ 1.21
CALCOCO2-211ENST00000508679 ZC3H13Q5T200 1668 aaKnown RBP22.6■■□□□ 1.21
CALCOCO2-211ENST00000508679 MLECQ14165 292 aa22.6■■□□□ 1.21
CALCOCO2-211ENST00000508679 PPP6R1Q9UPN7 881 aa22.6■■□□□ 1.21
CALCOCO2-211ENST00000508679 ABCC3O15438 1527 aa22.58■■□□□ 1.21
CALCOCO2-211ENST00000508679 GGT6Q6P531 493 aa22.58■■□□□ 1.21
CALCOCO2-211ENST00000508679 IQGAP3Q86VI3 1631 aa22.57■■□□□ 1.2
CALCOCO2-211ENST00000508679 LMTK2Q8IWU2 1503 aa22.57■■□□□ 1.2
CALCOCO2-211ENST00000508679 SETD5Q9C0A6 1442 aa22.56■■□□□ 1.2
CALCOCO2-211ENST00000508679 C3P01024 1663 aa22.56■■□□□ 1.2
CALCOCO2-211ENST00000508679 CNTLNQ9NXG0 1405 aa22.53■■□□□ 1.2
CALCOCO2-211ENST00000508679 CAMSAP1Q5T5Y3 1602 aa22.53■■□□□ 1.2
CALCOCO2-211ENST00000508679 PTPRMP28827 1452 aa22.53■■□□□ 1.2
CALCOCO2-211ENST00000508679 TET3O43151 1660 aa22.5■■□□□ 1.19
CALCOCO2-211ENST00000508679 RAB3GAP2Q9H2M9 1393 aa22.5■■□□□ 1.19
CALCOCO2-211ENST00000508679 ZMYM3Q14202 1370 aa22.48■■□□□ 1.19
CALCOCO2-211ENST00000508679 PZPP20742 1482 aa22.48■■□□□ 1.19
CALCOCO2-211ENST00000508679 ARHGAP31Q2M1Z3 1444 aa22.48■■□□□ 1.19
CALCOCO2-211ENST00000508679 HRCP23327 699 aa22.47■■□□□ 1.19
CALCOCO2-211ENST00000508679 EFCAB6Q5THR3 1501 aa22.47■■□□□ 1.19
CALCOCO2-211ENST00000508679 E9PCH4 1651 aa22.46■■□□□ 1.19
CALCOCO2-211ENST00000508679 WASHC2CQ9Y4E1 1318 aa22.46■■□□□ 1.19
CALCOCO2-211ENST00000508679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.45■■□□□ 1.182e-10■■□□□ 14.5
CALCOCO2-211ENST00000508679 NUP155O75694 1391 aa22.44■■□□□ 1.18
CALCOCO2-211ENST00000508679 CFAP65Q6ZU64 1925 aaKnown RBP22.44■■□□□ 1.18
CALCOCO2-211ENST00000508679 NPATQ14207 1427 aa22.43■■□□□ 1.18
CALCOCO2-211ENST00000508679 KANK1Q14678 1352 aa22.43■■□□□ 1.18
CALCOCO2-211ENST00000508679 CEBPAP49715 358 aaPredicted RBP22.42■■□□□ 1.18
CALCOCO2-211ENST00000508679 PREX1Q8TCU6 1659 aa22.42■■□□□ 1.18
CALCOCO2-211ENST00000508679 SPATA31D1Q6ZQQ2 1576 aa22.41■■□□□ 1.18
CALCOCO2-211ENST00000508679 SETD1BQ9UPS6 1966 aaKnown RBP22.41■■□□□ 1.18
CALCOCO2-211ENST00000508679 RPRD2Q5VT52 1461 aaKnown RBP22.38■■□□□ 1.17
CALCOCO2-211ENST00000508679 ERVK-7P63135 1459 aa22.36■■□□□ 1.17
CALCOCO2-211ENST00000508679 NOS1P29475 1434 aa22.36■■□□□ 1.17
CALCOCO2-211ENST00000508679 ESF1Q9H501 851 aaKnown RBP22.36■■□□□ 1.17
CALCOCO2-211ENST00000508679 ACIN1Q9UKV3 1341 aaKnown RBP22.35■■□□□ 1.17
CALCOCO2-211ENST00000508679 FBXO31Q5XUX0 539 aaPredicted RBP22.35■■□□□ 1.17
CALCOCO2-211ENST00000508679 SYNMO15061 1565 aa22.35■■□□□ 1.17
CALCOCO2-211ENST00000508679 SPHKAPQ2M3C7 1700 aa22.32■■□□□ 1.16
CALCOCO2-211ENST00000508679 TRIM52Q96A61 297 aa22.31■■□□□ 1.16
CALCOCO2-211ENST00000508679 PTPRTO14522 1441 aa22.31■■□□□ 1.16
CALCOCO2-211ENST00000508679 PLA2R1Q13018 1463 aa22.31■■□□□ 1.16
CALCOCO2-211ENST00000508679 MPHOSPH9Q99550 1183 aa22.3■■□□□ 1.16
CALCOCO2-211ENST00000508679 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
CALCOCO2-211ENST00000508679 PIK3C2BO00750 1634 aa22.3■■□□□ 1.16
CALCOCO2-211ENST00000508679 MYO3AQ8NEV4 1616 aa22.3■■□□□ 1.16
CALCOCO2-211ENST00000508679 ZNF142P52746 1687 aaPredicted RBP22.28■■□□□ 1.16
CALCOCO2-211ENST00000508679 SLC4A1APQ9BWU0 796 aaKnown RBP22.26■■□□□ 1.15
CALCOCO2-211ENST00000508679 PKD2Q13563 968 aa22.25■■□□□ 1.15
CALCOCO2-211ENST00000508679 TNRQ92752 1358 aa22.25■■□□□ 1.15
CALCOCO2-211ENST00000508679 LMTK3Q96Q04 1460 aa22.23■■□□□ 1.15
CALCOCO2-211ENST00000508679 TRPM2O94759 1503 aa22.23■■□□□ 1.15
CALCOCO2-211ENST00000508679 PLPPR3Q6T4P5 718 aa22.23■■□□□ 1.15
CALCOCO2-211ENST00000508679 UGGT1Q9NYU2 1555 aa22.23■■□□□ 1.15
CALCOCO2-211ENST00000508679 NLRP1Q9C000 1473 aa22.22■■□□□ 1.15
CALCOCO2-211ENST00000508679 KDM5AP29375 1690 aaKnown RBP22.21■■□□□ 1.15
CALCOCO2-211ENST00000508679 CEP170BQ9Y4F5 1589 aaPredicted RBP22.21■■□□□ 1.15
CALCOCO2-211ENST00000508679 UBR1Q8IWV7 1749 aa22.21■■□□□ 1.15
CALCOCO2-211ENST00000508679 CLTCL1P53675 1640 aa22.2■■□□□ 1.15
CALCOCO2-211ENST00000508679 FOXD1Q16676 465 aa22.2■■□□□ 1.14
CALCOCO2-211ENST00000508679 MYO5BQ9ULV0 1848 aa22.19■■□□□ 1.14
CALCOCO2-211ENST00000508679 A2ML1A8K2U0 1454 aa22.19■■□□□ 1.14
CALCOCO2-211ENST00000508679 DHX57Q6P158 1386 aaKnown RBP22.18■■□□□ 1.14
CALCOCO2-211ENST00000508679 UHRF1BP1Q6BDS2 1440 aa22.17■■□□□ 1.14
CALCOCO2-211ENST00000508679 ANKRD30BQ9BXX2 1392 aa22.17■■□□□ 1.14
CALCOCO2-211ENST00000508679 IDI1Q13907 227 aa22.16■■□□□ 1.14
CALCOCO2-211ENST00000508679 TMEM131LA2VDJ0 1609 aa22.16■■□□□ 1.14
CALCOCO2-211ENST00000508679 SLC52A1Q9NWF4 448 aa22.13■■□□□ 1.13
CALCOCO2-211ENST00000508679 ADGRB3O60242 1522 aa22.13■■□□□ 1.13
CALCOCO2-211ENST00000508679 KIF1BO60333 1816 aa22.12■■□□□ 1.13
CALCOCO2-211ENST00000508679 STRCQ7RTU9 1775 aa22.09■■□□□ 1.13
CALCOCO2-211ENST00000508679 NEURL4Q96JN8 1562 aa22.08■■□□□ 1.13
CALCOCO2-211ENST00000508679 AEBP2Q6ZN18 517 aaPredicted RBP22.08■■□□□ 1.12
CALCOCO2-211ENST00000508679 ARHGAP23Q9P227 1491 aa22.07■■□□□ 1.12
CALCOCO2-211ENST00000508679 SLIT1O75093 1534 aa22.07■■□□□ 1.12
CALCOCO2-211ENST00000508679 SPATA31E1Q6ZUB1 1445 aa22.05■■□□□ 1.12
CALCOCO2-211ENST00000508679 CCDC144AA2RUR9 1427 aa22.03■■□□□ 1.12
CALCOCO2-211ENST00000508679 HSPA2P54652 639 aa22.02■■□□□ 1.12
CALCOCO2-211ENST00000508679 IFT172Q9UG01 1749 aa22.02■■□□□ 1.12
CALCOCO2-211ENST00000508679 ZFYVE9O95405 1425 aa22.02■■□□□ 1.12
CALCOCO2-211ENST00000508679 POLR1AO95602 1720 aaPredicted RBP22.01■■□□□ 1.11
CALCOCO2-211ENST00000508679 TMEM2Q9UHN6 1383 aa21.99■■□□□ 1.11
CALCOCO2-211ENST00000508679 PPLO60437 1756 aa21.99■■□□□ 1.11
CALCOCO2-211ENST00000508679 NEXMIFQ5QGS0 1516 aa21.99■■□□□ 1.11
CALCOCO2-211ENST00000508679 THEMISQ8N1K5 641 aaPredicted RBP21.99■■□□□ 1.11
CALCOCO2-211ENST00000508679 MED14O60244 1454 aa21.95■■□□□ 1.1
CALCOCO2-211ENST00000508679 LTKP29376 864 aa21.94■■□□□ 1.1
CALCOCO2-211ENST00000508679 RIMS2Q9UQ26 1411 aa21.93■■□□□ 1.1
CALCOCO2-211ENST00000508679 SIN3AQ96ST3 1273 aa21.92■■□□□ 1.1
CALCOCO2-211ENST00000508679 SCAF11Q99590 1463 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms