RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 TMC1Q8TDI8 760 aa17.64■□□□□ 0.41
CAST-223ENST00000508608 BRD4O60885 1362 aaPredicted RBP17.64■□□□□ 0.41
CAST-223ENST00000508608 PNISRQ8TF01 805 aaKnown RBP17.63■□□□□ 0.41
CAST-223ENST00000508608 RALBP1Q15311 655 aa17.62■□□□□ 0.41
CAST-223ENST00000508608 UNC13BO14795 1591 aa17.62■□□□□ 0.41
CAST-223ENST00000508608 MAST1Q9Y2H9 1570 aa17.62■□□□□ 0.41
CAST-223ENST00000508608 RSPH4AQ5TD94 716 aa17.61■□□□□ 0.41
CAST-223ENST00000508608 MYBBP1AQ9BQG0 1328 aaKnown RBP17.61■□□□□ 0.41
CAST-223ENST00000508608 LRPPRCP42704 1394 aaKnown RBP17.61■□□□□ 0.41
CAST-223ENST00000508608 LAMC1P11047 1609 aa17.61■□□□□ 0.41
CAST-223ENST00000508608 DCAF11Q8TEB1 546 aa17.59■□□□□ 0.41
CAST-223ENST00000508608 ST20-MTHFSA0A0A6YYL1 179 aa17.59■□□□□ 0.41
CAST-223ENST00000508608 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
CAST-223ENST00000508608 HNRNPMP52272 730 aaKnown RBP eCLIP17.58■□□□□ 0.41
CAST-223ENST00000508608 CCDC144AA2RUR9 1427 aa17.58■□□□□ 0.4
CAST-223ENST00000508608 KDM2AQ9Y2K7 1162 aa17.57■□□□□ 0.4
CAST-223ENST00000508608 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
CAST-223ENST00000508608 EIF2AK4Q9P2K8 1649 aaKnown RBP17.56■□□□□ 0.4
CAST-223ENST00000508608 PLXNC1O60486 1568 aa17.56■□□□□ 0.4
CAST-223ENST00000508608 CCDC136Q96JN2 1154 aa17.56■□□□□ 0.4
CAST-223ENST00000508608 MYO5CQ9NQX4 1742 aa17.55■□□□□ 0.4
CAST-223ENST00000508608 IQGAP3Q86VI3 1631 aa17.55■□□□□ 0.4
CAST-223ENST00000508608 SYCP2Q9BX26 1530 aa17.54■□□□□ 0.4
CAST-223ENST00000508608 MYT1LQ9UL68 1186 aa17.53■□□□□ 0.4
CAST-223ENST00000508608 GPRASP1Q5JY77 1395 aa17.52■□□□□ 0.4
CAST-223ENST00000508608 PRDM15P57071 1507 aaPredicted RBP17.52■□□□□ 0.4
CAST-223ENST00000508608 ARHGAP5Q13017 1502 aa17.52■□□□□ 0.4
CAST-223ENST00000508608 PLEKHH2Q8IVE3 1493 aa17.52■□□□□ 0.4
CAST-223ENST00000508608 TTC37Q6PGP7 1564 aa17.52■□□□□ 0.4
CAST-223ENST00000508608 PARD3Q8TEW0 1356 aa17.52■□□□□ 0.39
CAST-223ENST00000508608 NLRP13Q86W25 1043 aa17.51■□□□□ 0.39
CAST-223ENST00000508608 COL17A1Q9UMD9 1497 aaPredicted RBP17.5■□□□□ 0.39
CAST-223ENST00000508608 ZMYM4Q5VZL5 1548 aa17.49■□□□□ 0.39
CAST-223ENST00000508608 A2MP01023 1474 aa17.49■□□□□ 0.39
CAST-223ENST00000508608 WASHC2CQ9Y4E1 1318 aa17.48■□□□□ 0.39
CAST-223ENST00000508608 CHD1O14646 1710 aa17.48■□□□□ 0.39
CAST-223ENST00000508608 SHROOM2Q13796 1616 aa17.48■□□□□ 0.39
CAST-223ENST00000508608 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.48■□□□□ 0.39
CAST-223ENST00000508608 DUOX2Q9NRD8 1548 aa17.47■□□□□ 0.39
CAST-223ENST00000508608 INSRP06213 1382 aa17.47■□□□□ 0.39
CAST-223ENST00000508608 PDE3BQ13370 1112 aa17.47■□□□□ 0.39
CAST-223ENST00000508608 ATP10AO60312 1499 aa17.46■□□□□ 0.39
CAST-223ENST00000508608 PLA2R1Q13018 1463 aa17.46■□□□□ 0.39
CAST-223ENST00000508608 MAGI2Q86UL8 1455 aa17.46■□□□□ 0.39
CAST-223ENST00000508608 RNF17Q9BXT8 1623 aaKnown RBP17.45■□□□□ 0.38
CAST-223ENST00000508608 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
CAST-223ENST00000508608 NOP58Q9Y2X3 529 aaKnown RBP17.44■□□□□ 0.38
CAST-223ENST00000508608 ERBINQ96RT1 1412 aa17.44■□□□□ 0.38
CAST-223ENST00000508608 ABCC2Q92887 1545 aa17.43■□□□□ 0.38
CAST-223ENST00000508608 ANP32AP39687 249 aaKnown RBP17.42■□□□□ 0.38
CAST-223ENST00000508608 BCL11AQ9H165 835 aa17.42■□□□□ 0.38
CAST-223ENST00000508608 RCAN3Q9UKA8 241 aa17.41■□□□□ 0.38
CAST-223ENST00000508608 PER1O15534 1290 aaPredicted RBP17.4■□□□□ 0.38
CAST-223ENST00000508608 RGL3Q3MIN7 710 aa17.4■□□□□ 0.38
CAST-223ENST00000508608 BLMP54132 1417 aaPredicted RBP17.4■□□□□ 0.38
CAST-223ENST00000508608 NBPF1Q3BBV0 1214 aa17.39■□□□□ 0.37
CAST-223ENST00000508608 DISP3Q9P2K9 1392 aa17.39■□□□□ 0.37
CAST-223ENST00000508608 SENP3-EIF4A1A0A087X0R7 540 aa17.38■□□□□ 0.37
CAST-223ENST00000508608 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.379e-7■■■□□ 17.3
CAST-223ENST00000508608 TMF1P82094 1093 aa17.38■□□□□ 0.37
CAST-223ENST00000508608 TESK2Q96S53 571 aa17.38■□□□□ 0.37
CAST-223ENST00000508608 IQGAP1P46940 1657 aa17.36■□□□□ 0.37
CAST-223ENST00000508608 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
CAST-223ENST00000508608 ABCC1P33527 1531 aa17.35■□□□□ 0.37
CAST-223ENST00000508608 MADDQ8WXG6 1647 aa17.34■□□□□ 0.37
CAST-223ENST00000508608 CEP152O94986 1710 aa17.34■□□□□ 0.37
CAST-223ENST00000508608 SPHKAPQ2M3C7 1700 aa17.34■□□□□ 0.37
CAST-223ENST00000508608 TCERG1O14776 1098 aaKnown RBP17.33■□□□□ 0.37
CAST-223ENST00000508608 EXOC6Q8TAG9 804 aa17.33■□□□□ 0.36
CAST-223ENST00000508608 PLCH2O75038 1416 aa17.33■□□□□ 0.36
CAST-223ENST00000508608 ZCCHC11Q5TAX3 1644 aaKnown RBP17.32■□□□□ 0.36
CAST-223ENST00000508608 PANK3Q9H999 370 aa17.32■□□□□ 0.36
CAST-223ENST00000508608 CC2D1BQ5T0F9 858 aaKnown RBP17.31■□□□□ 0.36
CAST-223ENST00000508608 TRPM2O94759 1503 aa17.31■□□□□ 0.36
CAST-223ENST00000508608 SYNMO15061 1565 aa17.3■□□□□ 0.36
CAST-223ENST00000508608 SALL2Q9Y467 1007 aaPredicted RBP17.3■□□□□ 0.36
CAST-223ENST00000508608 EFCAB2Q5VUJ9 269 aa17.29■□□□□ 0.36
CAST-223ENST00000508608 ZBTB47Q9UFB7 747 aaPredicted RBP17.29■□□□□ 0.36
CAST-223ENST00000508608 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
CAST-223ENST00000508608 MS4A1P11836 297 aa17.28■□□□□ 0.36
CAST-223ENST00000508608 STAC3Q96MF2 364 aa17.28■□□□□ 0.36
CAST-223ENST00000508608 ERCC6L2Q5T890 1561 aa17.28■□□□□ 0.36
CAST-223ENST00000508608 DEPDC5O75140 1603 aa17.27■□□□□ 0.36
CAST-223ENST00000508608 ARAP3Q8WWN8 1544 aa17.27■□□□□ 0.36
CAST-223ENST00000508608 UHRF1BP1LA0JNW5 1464 aa17.27■□□□□ 0.36
CAST-223ENST00000508608 WDR7Q9Y4E6 1490 aa17.27■□□□□ 0.36
CAST-223ENST00000508608 CDCA8Q53HL2 280 aa17.26■□□□□ 0.35
CAST-223ENST00000508608 KIAA1210Q9ULL0 1709 aa17.26■□□□□ 0.35
CAST-223ENST00000508608 TET3O43151 1660 aa17.26■□□□□ 0.35
CAST-223ENST00000508608 CDCA7LQ96GN5 454 aa17.26■□□□□ 0.35
CAST-223ENST00000508608 RTEL1-TNFRSF6BF6WH68 1400 aa17.26■□□□□ 0.35
CAST-223ENST00000508608 SCAPERQ9BY12 1400 aa17.25■□□□□ 0.35
CAST-223ENST00000508608 ZFYVE16Q7Z3T8 1539 aa17.24■□□□□ 0.35
CAST-223ENST00000508608 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
CAST-223ENST00000508608 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
CAST-223ENST00000508608 CLTCL1P53675 1640 aa17.23■□□□□ 0.35
CAST-223ENST00000508608 KNSTRNQ9Y448 316 aa17.23■□□□□ 0.35
CAST-223ENST00000508608 TRAPPC8Q9Y2L5 1435 aa17.23■□□□□ 0.35
CAST-223ENST00000508608 MYOM1P52179 1685 aa17.23■□□□□ 0.35
CAST-223ENST00000508608 NEURL4Q96JN8 1562 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms