RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 KIF15Q9NS87 1388 aa37.22■■■■□ 3.55
SRPK1-210ENST00000508473 WASHC2CQ9Y4E1 1318 aa37.19■■■■□ 3.54
SRPK1-210ENST00000508473 DUOX2Q9NRD8 1548 aa37.19■■■■□ 3.54
SRPK1-210ENST00000508473 SETD1BQ9UPS6 1966 aaKnown RBP37.18■■■■□ 3.54
SRPK1-210ENST00000508473 NPATQ14207 1427 aa37.16■■■■□ 3.54
SRPK1-210ENST00000508473 PTPRKQ15262 1439 aa37.14■■■■□ 3.54
SRPK1-210ENST00000508473 KDM5DQ9BY66 1539 aa37.14■■■■□ 3.54
SRPK1-210ENST00000508473 ANKRD30AQ9BXX3 1397 aa37.14■■■■□ 3.54
SRPK1-210ENST00000508473 EIF2AK4Q9P2K8 1649 aaKnown RBP37.1■■■■□ 3.53
SRPK1-210ENST00000508473 RNF17Q9BXT8 1623 aaKnown RBP37.09■■■■□ 3.53
SRPK1-210ENST00000508473 NCOA1Q15788 1441 aa37.08■■■■□ 3.53
SRPK1-210ENST00000508473 ERBINQ96RT1 1412 aa37.07■■■■□ 3.52
SRPK1-210ENST00000508473 FAM135AQ9P2D6 1515 aa37.06■■■■□ 3.52
SRPK1-210ENST00000508473 FBXO31Q5XUX0 539 aaPredicted RBP37.06■■■■□ 3.52
SRPK1-210ENST00000508473 MROH1Q8NDA8 1641 aa37.02■■■■□ 3.52
SRPK1-210ENST00000508473 ADGRL2O95490 1459 aa37.01■■■■□ 3.52
SRPK1-210ENST00000508473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.01■■■■□ 3.524e-9■■■□□ 15
SRPK1-210ENST00000508473 ABCC3O15438 1527 aa37■■■■□ 3.51
SRPK1-210ENST00000508473 PZPP20742 1482 aa37■■■■□ 3.51
SRPK1-210ENST00000508473 ITGAEP38570 1179 aa36.99■■■■□ 3.51
SRPK1-210ENST00000508473 ILDR1Q86SU0 546 aaPredicted RBP36.99■■■■□ 3.51
SRPK1-210ENST00000508473 TNRQ92752 1358 aa36.95■■■■□ 3.51
SRPK1-210ENST00000508473 MYO3AQ8NEV4 1616 aa36.95■■■■□ 3.51
SRPK1-210ENST00000508473 ZC3H13Q5T200 1668 aaKnown RBP36.91■■■■□ 3.5
SRPK1-210ENST00000508473 PRDM15P57071 1507 aaPredicted RBP36.9■■■■□ 3.5
SRPK1-210ENST00000508473 CEP152O94986 1710 aa36.89■■■■□ 3.5
SRPK1-210ENST00000508473 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.89■■■■□ 3.5
SRPK1-210ENST00000508473 CEP170BQ9Y4F5 1589 aaPredicted RBP36.88■■■■□ 3.49
SRPK1-210ENST00000508473 ANKRD50Q9ULJ7 1429 aa36.87■■■■□ 3.49
SRPK1-210ENST00000508473 STRCQ7RTU9 1775 aa36.87■■■■□ 3.49
SRPK1-210ENST00000508473 KANK1Q14678 1352 aa36.86■■■■□ 3.49
SRPK1-210ENST00000508473 CAMSAP1Q5T5Y3 1602 aa36.85■■■■□ 3.49
SRPK1-210ENST00000508473 DEPDC5O75140 1603 aa36.85■■■■□ 3.49
SRPK1-210ENST00000508473 ZNF142P52746 1687 aaPredicted RBP36.83■■■■□ 3.49
SRPK1-210ENST00000508473 A2ML1A8K2U0 1454 aa36.83■■■■□ 3.49
SRPK1-210ENST00000508473 DMRT2Q9Y5R5 561 aa36.83■■■■□ 3.49
SRPK1-210ENST00000508473 ROCK1Q13464 1354 aa36.82■■■■□ 3.49
SRPK1-210ENST00000508473 RRBP1Q9P2E9 1410 aaKnown RBP36.82■■■■□ 3.48
SRPK1-210ENST00000508473 ERVK-7P63135 1459 aa36.79■■■■□ 3.48
SRPK1-210ENST00000508473 NCKAP5LQ9HCH0 1330 aa36.79■■■■□ 3.48
SRPK1-210ENST00000508473 SPATA31D1Q6ZQQ2 1576 aa36.75■■■■□ 3.47
SRPK1-210ENST00000508473 ARHGAP31Q2M1Z3 1444 aa36.74■■■■□ 3.47
SRPK1-210ENST00000508473 NLRP1Q9C000 1473 aa36.73■■■■□ 3.47
SRPK1-210ENST00000508473 VWDEQ8N2E2 1590 aa36.73■■■■□ 3.47
SRPK1-210ENST00000508473 CFAP65Q6ZU64 1925 aaKnown RBP36.72■■■■□ 3.47
SRPK1-210ENST00000508473 PTPRTO14522 1441 aa36.71■■■■□ 3.47
SRPK1-210ENST00000508473 PLA2R1Q13018 1463 aa36.7■■■■□ 3.47
SRPK1-210ENST00000508473 LMTK2Q8IWU2 1503 aa36.69■■■■□ 3.46
SRPK1-210ENST00000508473 PKD2Q13563 968 aa36.67■■■■□ 3.46
SRPK1-210ENST00000508473 THEMISQ8N1K5 641 aaPredicted RBP36.65■■■■□ 3.46
SRPK1-210ENST00000508473 UGGT1Q9NYU2 1555 aa36.65■■■■□ 3.46
SRPK1-210ENST00000508473 EFCAB6Q5THR3 1501 aa36.59■■■■□ 3.45
SRPK1-210ENST00000508473 UNC13BO14795 1591 aa36.58■■■■□ 3.45
SRPK1-210ENST00000508473 ANKLE2Q86XL3 938 aa36.55■■■■□ 3.44
SRPK1-210ENST00000508473 CERKQ8TCT0 537 aa36.55■■■■□ 3.44
SRPK1-210ENST00000508473 NUP155O75694 1391 aa36.53■■■■□ 3.44
SRPK1-210ENST00000508473 NOS1P29475 1434 aa36.5■■■■□ 3.43
SRPK1-210ENST00000508473 TET3O43151 1660 aa36.49■■■■□ 3.43
SRPK1-210ENST00000508473 IDI1Q13907 227 aa36.49■■■■□ 3.43
SRPK1-210ENST00000508473 STAG3Q9UJ98 1225 aa36.47■■■■□ 3.43
SRPK1-210ENST00000508473 NAIPQ13075 1403 aa36.47■■■■□ 3.43
SRPK1-210ENST00000508473 SYNMO15061 1565 aa36.47■■■■□ 3.43
SRPK1-210ENST00000508473 RPRD2Q5VT52 1461 aaKnown RBP36.46■■■■□ 3.43
SRPK1-210ENST00000508473 FBXO41Q8TF61 875 aa36.46■■■■□ 3.43
SRPK1-210ENST00000508473 UBR1Q8IWV7 1749 aa36.45■■■■□ 3.43
SRPK1-210ENST00000508473 NEURL4Q96JN8 1562 aa36.45■■■■□ 3.43
SRPK1-210ENST00000508473 ZNF335Q9H4Z2 1342 aaPredicted RBP36.44■■■■□ 3.42
SRPK1-210ENST00000508473 POLR1AO95602 1720 aaPredicted RBP36.44■■■■□ 3.42
SRPK1-210ENST00000508473 PIK3C2BO00750 1634 aa36.43■■■■□ 3.42
SRPK1-210ENST00000508473 IQGAP3Q86VI3 1631 aa36.43■■■■□ 3.42
SRPK1-210ENST00000508473 GCC2Q8IWJ2 1684 aa36.41■■■■□ 3.42
SRPK1-210ENST00000508473 NPHP4O75161 1426 aaPredicted RBP36.4■■■■□ 3.42
SRPK1-210ENST00000508473 LTBP4Q8N2S1 1624 aa36.39■■■■□ 3.42
SRPK1-210ENST00000508473 SLC52A1Q9NWF4 448 aa36.39■■■■□ 3.42
SRPK1-210ENST00000508473 HFM1A2PYH4 1435 aa36.37■■■■□ 3.41
SRPK1-210ENST00000508473 TXNDC2Q86VQ3 553 aa36.36■■■■□ 3.41
SRPK1-210ENST00000508473 E9PCH4 1651 aa36.35■■■■□ 3.41
SRPK1-210ENST00000508473 LTKP29376 864 aa36.35■■■■□ 3.41
SRPK1-210ENST00000508473 MED14O60244 1454 aa36.35■■■■□ 3.41
SRPK1-210ENST00000508473 ARHGAP23Q9P227 1491 aa36.33■■■■□ 3.41
SRPK1-210ENST00000508473 TMEM2Q9UHN6 1383 aa36.32■■■■□ 3.4
SRPK1-210ENST00000508473 SLIT1O75093 1534 aa36.32■■■■□ 3.4
SRPK1-210ENST00000508473 SCAF11Q99590 1463 aaKnown RBP36.31■■■■□ 3.4
SRPK1-210ENST00000508473 EID1Q9Y6B2 187 aa36.31■■■■□ 3.4
SRPK1-210ENST00000508473 TRIM52Q96A61 297 aa36.3■■■■□ 3.4
SRPK1-210ENST00000508473 ADGRB3O60242 1522 aa36.29■■■■□ 3.4
SRPK1-210ENST00000508473 IQGAP1P46940 1657 aa36.26■■■■□ 3.4
SRPK1-210ENST00000508473 CHGAP10645 457 aaKnown RBP36.26■■■■□ 3.4
SRPK1-210ENST00000508473 KDM5AP29375 1690 aaKnown RBP36.23■■■■□ 3.39
SRPK1-210ENST00000508473 TMEM131LA2VDJ0 1609 aa36.14■■■■□ 3.38
SRPK1-210ENST00000508473 SLC4A1APQ9BWU0 796 aaKnown RBP36.13■■■■□ 3.37
SRPK1-210ENST00000508473 SENP3Q9H4L4 574 aaPredicted RBP36.13■■■■□ 3.37
SRPK1-210ENST00000508473 IQSEC2Q5JU85 1478 aa36.11■■■■□ 3.37
SRPK1-210ENST00000508473 MYO5BQ9ULV0 1848 aa36.11■■■■□ 3.37
SRPK1-210ENST00000508473 RIMS2Q9UQ26 1411 aa36.1■■■■□ 3.37
SRPK1-210ENST00000508473 CPS1P31327 1500 aa36.09■■■■□ 3.37
SRPK1-210ENST00000508473 BCANQ96GW7 911 aa36.09■■■■□ 3.37
SRPK1-210ENST00000508473 ZFYVE9O95405 1425 aa36.08■■■■□ 3.37
SRPK1-210ENST00000508473 SPHKAPQ2M3C7 1700 aa36.08■■■■□ 3.37
SRPK1-210ENST00000508473 PPP1R15AO75807 674 aaPredicted RBP36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms