RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 CLTCQ00610 1675 aaKnown RBP23.13■■□□□ 1.29
TRIO-211ENST00000508343 WASHC2CQ9Y4E1 1318 aa23.12■■□□□ 1.29
TRIO-211ENST00000508343 NCOA1Q15788 1441 aa23.1■■□□□ 1.29
TRIO-211ENST00000508343 HSPA2P54652 639 aa23.1■■□□□ 1.29
TRIO-211ENST00000508343 NPATQ14207 1427 aa23.09■■□□□ 1.29
TRIO-211ENST00000508343 EIF2AK4Q9P2K8 1649 aaKnown RBP23.08■■□□□ 1.29
TRIO-211ENST00000508343 PREX1Q8TCU6 1659 aa23.08■■□□□ 1.29
TRIO-211ENST00000508343 FAM135AQ9P2D6 1515 aa23.08■■□□□ 1.28
TRIO-211ENST00000508343 UHRF1BP1Q6BDS2 1440 aa23.08■■□□□ 1.28
TRIO-211ENST00000508343 ERBINQ96RT1 1412 aa23.08■■□□□ 1.28
TRIO-211ENST00000508343 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.06■■□□□ 1.28
TRIO-211ENST00000508343 KDM5DQ9BY66 1539 aa23.06■■□□□ 1.28
TRIO-211ENST00000508343 PTPRKQ15262 1439 aa23.06■■□□□ 1.28
TRIO-211ENST00000508343 ADGRL2O95490 1459 aa23.05■■□□□ 1.28
TRIO-211ENST00000508343 RNF17Q9BXT8 1623 aaKnown RBP23.05■■□□□ 1.28
TRIO-211ENST00000508343 FBXO31Q5XUX0 539 aaPredicted RBP23■■□□□ 1.27
TRIO-211ENST00000508343 ITGAEP38570 1179 aa22.99■■□□□ 1.27
TRIO-211ENST00000508343 PZPP20742 1482 aa22.98■■□□□ 1.27
TRIO-211ENST00000508343 ABCC3O15438 1527 aa22.98■■□□□ 1.27
TRIO-211ENST00000508343 MROH1Q8NDA8 1641 aa22.98■■□□□ 1.27
TRIO-211ENST00000508343 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.98■■□□□ 1.275e-8■■□□□ 14.3
TRIO-211ENST00000508343 ROCK1Q13464 1354 aa22.97■■□□□ 1.27
TRIO-211ENST00000508343 RRBP1Q9P2E9 1410 aaKnown RBP22.97■■□□□ 1.27
TRIO-211ENST00000508343 KANK1Q14678 1352 aa22.95■■□□□ 1.26
TRIO-211ENST00000508343 ZC3H13Q5T200 1668 aaKnown RBP22.95■■□□□ 1.26
TRIO-211ENST00000508343 ANKRD50Q9ULJ7 1429 aa22.95■■□□□ 1.26
TRIO-211ENST00000508343 PRDM15P57071 1507 aaPredicted RBP22.93■■□□□ 1.26
TRIO-211ENST00000508343 TNRQ92752 1358 aa22.93■■□□□ 1.26
TRIO-211ENST00000508343 DEPDC5O75140 1603 aa22.92■■□□□ 1.26
TRIO-211ENST00000508343 DMRT2Q9Y5R5 561 aa22.89■■□□□ 1.25
TRIO-211ENST00000508343 MYO3AQ8NEV4 1616 aa22.89■■□□□ 1.25
TRIO-211ENST00000508343 CEP152O94986 1710 aa22.88■■□□□ 1.25
TRIO-211ENST00000508343 ARHGAP31Q2M1Z3 1444 aa22.88■■□□□ 1.25
TRIO-211ENST00000508343 CEP170BQ9Y4F5 1589 aaPredicted RBP22.87■■□□□ 1.25
TRIO-211ENST00000508343 CAMSAP1Q5T5Y3 1602 aa22.86■■□□□ 1.25
TRIO-211ENST00000508343 A2ML1A8K2U0 1454 aa22.86■■□□□ 1.25
TRIO-211ENST00000508343 VWDEQ8N2E2 1590 aa22.85■■□□□ 1.25
TRIO-211ENST00000508343 ZNF142P52746 1687 aaPredicted RBP22.84■■□□□ 1.25
TRIO-211ENST00000508343 STRCQ7RTU9 1775 aa22.84■■□□□ 1.25
TRIO-211ENST00000508343 LMTK2Q8IWU2 1503 aa22.84■■□□□ 1.25
TRIO-211ENST00000508343 ERVK-7P63135 1459 aa22.84■■□□□ 1.25
TRIO-211ENST00000508343 NLRP1Q9C000 1473 aa22.83■■□□□ 1.25
TRIO-211ENST00000508343 SPATA31D1Q6ZQQ2 1576 aa22.83■■□□□ 1.25
TRIO-211ENST00000508343 CFAP65Q6ZU64 1925 aaKnown RBP22.8■■□□□ 1.24
TRIO-211ENST00000508343 THEMISQ8N1K5 641 aaPredicted RBP22.8■■□□□ 1.24
TRIO-211ENST00000508343 NCKAP5LQ9HCH0 1330 aa22.8■■□□□ 1.24
TRIO-211ENST00000508343 PKD2Q13563 968 aa22.79■■□□□ 1.24
TRIO-211ENST00000508343 PLA2R1Q13018 1463 aa22.79■■□□□ 1.24
TRIO-211ENST00000508343 PTPRTO14522 1441 aa22.78■■□□□ 1.24
TRIO-211ENST00000508343 UNC13BO14795 1591 aa22.76■■□□□ 1.23
TRIO-211ENST00000508343 EFCAB6Q5THR3 1501 aa22.75■■□□□ 1.23
TRIO-211ENST00000508343 UGGT1Q9NYU2 1555 aa22.75■■□□□ 1.23
TRIO-211ENST00000508343 NUP155O75694 1391 aa22.75■■□□□ 1.23
TRIO-211ENST00000508343 NAIPQ13075 1403 aa22.73■■□□□ 1.23
TRIO-211ENST00000508343 ANKLE2Q86XL3 938 aa22.71■■□□□ 1.23
TRIO-211ENST00000508343 RPRD2Q5VT52 1461 aaKnown RBP22.71■■□□□ 1.23
TRIO-211ENST00000508343 NOS1P29475 1434 aa22.7■■□□□ 1.22
TRIO-211ENST00000508343 TET3O43151 1660 aa22.7■■□□□ 1.22
TRIO-211ENST00000508343 HFM1A2PYH4 1435 aa22.69■■□□□ 1.22
TRIO-211ENST00000508343 IDI1Q13907 227 aa22.69■■□□□ 1.22
TRIO-211ENST00000508343 SLC52A1Q9NWF4 448 aa22.68■■□□□ 1.22
TRIO-211ENST00000508343 IQGAP3Q86VI3 1631 aa22.68■■□□□ 1.22
TRIO-211ENST00000508343 STAG3Q9UJ98 1225 aa22.66■■□□□ 1.22
TRIO-211ENST00000508343 GCC2Q8IWJ2 1684 aa22.65■■□□□ 1.22
TRIO-211ENST00000508343 SYNMO15061 1565 aa22.64■■□□□ 1.22
TRIO-211ENST00000508343 UBR1Q8IWV7 1749 aa22.63■■□□□ 1.21
TRIO-211ENST00000508343 CERKQ8TCT0 537 aa22.63■■□□□ 1.21
TRIO-211ENST00000508343 PIK3C2BO00750 1634 aa22.6■■□□□ 1.21
TRIO-211ENST00000508343 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
TRIO-211ENST00000508343 E9PCH4 1651 aa22.6■■□□□ 1.21
TRIO-211ENST00000508343 POLR1AO95602 1720 aaPredicted RBP22.6■■□□□ 1.21
TRIO-211ENST00000508343 NEURL4Q96JN8 1562 aa22.59■■□□□ 1.21
TRIO-211ENST00000508343 ILDR1Q86SU0 546 aaPredicted RBP22.59■■□□□ 1.21
TRIO-211ENST00000508343 TXNDC2Q86VQ3 553 aa22.59■■□□□ 1.21
TRIO-211ENST00000508343 MED14O60244 1454 aa22.59■■□□□ 1.21
TRIO-211ENST00000508343 EID1Q9Y6B2 187 aa22.58■■□□□ 1.21
TRIO-211ENST00000508343 ARHGAP23Q9P227 1491 aa22.58■■□□□ 1.2
TRIO-211ENST00000508343 NPHP4O75161 1426 aaPredicted RBP22.57■■□□□ 1.2
TRIO-211ENST00000508343 SLIT1O75093 1534 aa22.57■■□□□ 1.2
TRIO-211ENST00000508343 LTKP29376 864 aa22.57■■□□□ 1.2
TRIO-211ENST00000508343 TMEM2Q9UHN6 1383 aa22.57■■□□□ 1.2
TRIO-211ENST00000508343 KDM5AP29375 1690 aaKnown RBP22.56■■□□□ 1.2
TRIO-211ENST00000508343 FBXO41Q8TF61 875 aa22.56■■□□□ 1.2
TRIO-211ENST00000508343 ZNF335Q9H4Z2 1342 aaPredicted RBP22.56■■□□□ 1.2
TRIO-211ENST00000508343 SCAF11Q99590 1463 aaKnown RBP22.54■■□□□ 1.2
TRIO-211ENST00000508343 LTBP4Q8N2S1 1624 aa22.54■■□□□ 1.2
TRIO-211ENST00000508343 ADGRB3O60242 1522 aa22.52■■□□□ 1.2
TRIO-211ENST00000508343 CHGAP10645 457 aaKnown RBP22.51■■□□□ 1.19
TRIO-211ENST00000508343 SLC4A1APQ9BWU0 796 aaKnown RBP22.51■■□□□ 1.19
TRIO-211ENST00000508343 IQGAP1P46940 1657 aa22.49■■□□□ 1.19
TRIO-211ENST00000508343 HDGFP51858 240 aaKnown RBP22.49■■□□□ 1.19
TRIO-211ENST00000508343 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
TRIO-211ENST00000508343 SETD5Q9C0A6 1442 aa22.48■■□□□ 1.19
TRIO-211ENST00000508343 TMEM131LA2VDJ0 1609 aa22.46■■□□□ 1.19
TRIO-211ENST00000508343 SPHKAPQ2M3C7 1700 aa22.44■■□□□ 1.18
TRIO-211ENST00000508343 RIMS2Q9UQ26 1411 aa22.43■■□□□ 1.18
TRIO-211ENST00000508343 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.43■■□□□ 1.18
TRIO-211ENST00000508343 IQSEC2Q5JU85 1478 aa22.42■■□□□ 1.18
TRIO-211ENST00000508343 ZFYVE9O95405 1425 aa22.42■■□□□ 1.18
TRIO-211ENST00000508343 MPHOSPH9Q99550 1183 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms