RNA–Protein interactions for RNA: ENST00000507544.2

COX18-204, Transcript of cytochrome c oxidase assembly factor COX18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COX18, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX18-204ENST00000507544 KDM5DQ9BY66 1539 aa27.31■■□□□ 1.96
COX18-204ENST00000507544 ZMYM3Q14202 1370 aa27.31■■□□□ 1.96
COX18-204ENST00000507544 ERBINQ96RT1 1412 aa27.31■■□□□ 1.96
COX18-204ENST00000507544 CLTCQ00610 1675 aaKnown RBP27.3■■□□□ 1.96
COX18-204ENST00000507544 SETD1BQ9UPS6 1966 aaKnown RBP27.28■■□□□ 1.96
COX18-204ENST00000507544 RNF17Q9BXT8 1623 aaKnown RBP27.28■■□□□ 1.96
COX18-204ENST00000507544 WASHC2CQ9Y4E1 1318 aa27.26■■□□□ 1.95
COX18-204ENST00000507544 ADGRL2O95490 1459 aa27.25■■□□□ 1.95
COX18-204ENST00000507544 RRP7BPQ9NSQ0 103 aa27.25■■□□□ 1.95
COX18-204ENST00000507544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.23■■□□□ 1.95
COX18-204ENST00000507544 ZC3H13Q5T200 1668 aaKnown RBP27.22■■□□□ 1.95
COX18-204ENST00000507544 CHIC2Q9UKJ5 165 aa27.22■■□□□ 1.95
COX18-204ENST00000507544 NCOA1Q15788 1441 aa27.22■■□□□ 1.95
COX18-204ENST00000507544 PPARGC1BQ86YN6 1023 aaKnown RBP27.2■■□□□ 1.94
COX18-204ENST00000507544 PTPRKQ15262 1439 aa27.18■■□□□ 1.94
COX18-204ENST00000507544 PZPP20742 1482 aa27.18■■□□□ 1.94
COX18-204ENST00000507544 PRDM15P57071 1507 aaPredicted RBP27.16■■□□□ 1.94
COX18-204ENST00000507544 KANK1Q14678 1352 aa27.16■■□□□ 1.94
COX18-204ENST00000507544 HSPA2P54652 639 aa27.15■■□□□ 1.94
COX18-204ENST00000507544 ABCC3O15438 1527 aa27.15■■□□□ 1.94
COX18-204ENST00000507544 ROCK1Q13464 1354 aa27.14■■□□□ 1.94
COX18-204ENST00000507544 MROH1Q8NDA8 1641 aa27.12■■□□□ 1.93
COX18-204ENST00000507544 RRBP1Q9P2E9 1410 aaKnown RBP27.12■■□□□ 1.93
COX18-204ENST00000507544 ANKRD50Q9ULJ7 1429 aa27.1■■□□□ 1.93
COX18-204ENST00000507544 DEPDC5O75140 1603 aa27.1■■□□□ 1.93
COX18-204ENST00000507544 MYO3AQ8NEV4 1616 aa27.09■■□□□ 1.93
COX18-204ENST00000507544 TNRQ92752 1358 aa27.09■■□□□ 1.93
COX18-204ENST00000507544 ZNF142P52746 1687 aaPredicted RBP27.07■■□□□ 1.92
COX18-204ENST00000507544 CEP170BQ9Y4F5 1589 aaPredicted RBP27.05■■□□□ 1.92
COX18-204ENST00000507544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.05■■□□□ 1.92
COX18-204ENST00000507544 ITGAEP38570 1179 aa27.04■■□□□ 1.92
COX18-204ENST00000507544 DMRT2Q9Y5R5 561 aa27.04■■□□□ 1.92
COX18-204ENST00000507544 CAMSAP1Q5T5Y3 1602 aa27.04■■□□□ 1.92
COX18-204ENST00000507544 A2ML1A8K2U0 1454 aa27.03■■□□□ 1.92
COX18-204ENST00000507544 CEP152O94986 1710 aa27.03■■□□□ 1.92
COX18-204ENST00000507544 NLRP1Q9C000 1473 aa27.02■■□□□ 1.92
COX18-204ENST00000507544 ARHGAP31Q2M1Z3 1444 aa27.02■■□□□ 1.92
COX18-204ENST00000507544 LMTK2Q8IWU2 1503 aa27■■□□□ 1.91
COX18-204ENST00000507544 FBXO31Q5XUX0 539 aaPredicted RBP27■■□□□ 1.91
COX18-204ENST00000507544 SPATA31D1Q6ZQQ2 1576 aa26.99■■□□□ 1.91
COX18-204ENST00000507544 ERVK-7P63135 1459 aa26.99■■□□□ 1.91
COX18-204ENST00000507544 VWDEQ8N2E2 1590 aa26.98■■□□□ 1.91
COX18-204ENST00000507544 PLA2R1Q13018 1463 aa26.98■■□□□ 1.91
COX18-204ENST00000507544 UNC13BO14795 1591 aa26.92■■□□□ 1.9
COX18-204ENST00000507544 PKD2Q13563 968 aa26.92■■□□□ 1.9
COX18-204ENST00000507544 PTPRTO14522 1441 aa26.91■■□□□ 1.9
COX18-204ENST00000507544 EFCAB6Q5THR3 1501 aa26.91■■□□□ 1.9
COX18-204ENST00000507544 STRCQ7RTU9 1775 aa26.89■■□□□ 1.9
COX18-204ENST00000507544 UGGT1Q9NYU2 1555 aa26.89■■□□□ 1.9
COX18-204ENST00000507544 RPRD2Q5VT52 1461 aaKnown RBP26.89■■□□□ 1.9
COX18-204ENST00000507544 THEMISQ8N1K5 641 aaPredicted RBP26.88■■□□□ 1.89
COX18-204ENST00000507544 TET3O43151 1660 aa26.85■■□□□ 1.89
COX18-204ENST00000507544 IQGAP3Q86VI3 1631 aa26.81■■□□□ 1.88
COX18-204ENST00000507544 NUP155O75694 1391 aa26.81■■□□□ 1.88
COX18-204ENST00000507544 HFM1A2PYH4 1435 aa26.81■■□□□ 1.88
COX18-204ENST00000507544 GCC2Q8IWJ2 1684 aa26.8■■□□□ 1.88
COX18-204ENST00000507544 ANKLE2Q86XL3 938 aa26.79■■□□□ 1.88
COX18-204ENST00000507544 NAIPQ13075 1403 aa26.79■■□□□ 1.88
COX18-204ENST00000507544 NCKAP5LQ9HCH0 1330 aa26.78■■□□□ 1.88
COX18-204ENST00000507544 NOS1P29475 1434 aa26.78■■□□□ 1.88
COX18-204ENST00000507544 CFAP65Q6ZU64 1925 aaKnown RBP26.77■■□□□ 1.88
COX18-204ENST00000507544 STAG3Q9UJ98 1225 aa26.76■■□□□ 1.87
COX18-204ENST00000507544 SLC52A1Q9NWF4 448 aa26.75■■□□□ 1.87
COX18-204ENST00000507544 POLR1AO95602 1720 aaPredicted RBP26.75■■□□□ 1.87
COX18-204ENST00000507544 UBR1Q8IWV7 1749 aa26.72■■□□□ 1.87
COX18-204ENST00000507544 KDM5AP29375 1690 aaKnown RBP26.72■■□□□ 1.87
COX18-204ENST00000507544 SYNMO15061 1565 aa26.71■■□□□ 1.87
COX18-204ENST00000507544 PIK3C2BO00750 1634 aa26.69■■□□□ 1.86
COX18-204ENST00000507544 ADGRB3O60242 1522 aa26.67■■□□□ 1.86
COX18-204ENST00000507544 SLIT1O75093 1534 aa26.67■■□□□ 1.86
COX18-204ENST00000507544 EID1Q9Y6B2 187 aa26.67■■□□□ 1.86
COX18-204ENST00000507544 MED14O60244 1454 aa26.67■■□□□ 1.86
COX18-204ENST00000507544 NEURL4Q96JN8 1562 aa26.67■■□□□ 1.86
COX18-204ENST00000507544 E9PCH4 1651 aa26.66■■□□□ 1.86
COX18-204ENST00000507544 ACIN1Q9UKV3 1341 aaKnown RBP26.66■■□□□ 1.86
COX18-204ENST00000507544 NPHP4O75161 1426 aaPredicted RBP26.66■■□□□ 1.86
COX18-204ENST00000507544 IDI1Q13907 227 aa26.66■■□□□ 1.86
COX18-204ENST00000507544 SCAF11Q99590 1463 aaKnown RBP26.66■■□□□ 1.86
COX18-204ENST00000507544 CERKQ8TCT0 537 aa26.65■■□□□ 1.86
COX18-204ENST00000507544 ARHGAP23Q9P227 1491 aa26.65■■□□□ 1.86
COX18-204ENST00000507544 TMEM2Q9UHN6 1383 aa26.63■■□□□ 1.85
COX18-204ENST00000507544 TRIM52Q96A61 297 aa26.62■■□□□ 1.85
COX18-204ENST00000507544 FBXO41Q8TF61 875 aa26.61■■□□□ 1.85
COX18-204ENST00000507544 IQGAP1P46940 1657 aa26.6■■□□□ 1.85
COX18-204ENST00000507544 TXNDC2Q86VQ3 553 aa26.59■■□□□ 1.85
COX18-204ENST00000507544 IQSEC2Q5JU85 1478 aa26.57■■□□□ 1.84
COX18-204ENST00000507544 HDGFP51858 240 aaKnown RBP26.57■■□□□ 1.84
COX18-204ENST00000507544 LTBP4Q8N2S1 1624 aa26.57■■□□□ 1.84
COX18-204ENST00000507544 ZNF335Q9H4Z2 1342 aaPredicted RBP26.56■■□□□ 1.84
COX18-204ENST00000507544 ILDR1Q86SU0 546 aaPredicted RBP26.54■■□□□ 1.84
COX18-204ENST00000507544 SPHKAPQ2M3C7 1700 aa26.53■■□□□ 1.84
COX18-204ENST00000507544 SLC4A1APQ9BWU0 796 aaKnown RBP26.53■■□□□ 1.84
COX18-204ENST00000507544 CHGAP10645 457 aaKnown RBP26.52■■□□□ 1.84
COX18-204ENST00000507544 CPS1P31327 1500 aa26.52■■□□□ 1.84
COX18-204ENST00000507544 LTKP29376 864 aa26.51■■□□□ 1.83
COX18-204ENST00000507544 TMEM131LA2VDJ0 1609 aa26.5■■□□□ 1.83
COX18-204ENST00000507544 SETD5Q9C0A6 1442 aa26.5■■□□□ 1.83
COX18-204ENST00000507544 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.5■■□□□ 1.83
COX18-204ENST00000507544 TRPM2O94759 1503 aa26.49■■□□□ 1.83
COX18-204ENST00000507544 PPP1R15AO75807 674 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms