RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 CCDC144AA2RUR9 1427 aa29.27■■■□□ 2.28
TTC39B-204ENST00000505732 DCAF11Q8TEB1 546 aa29.25■■■□□ 2.27
TTC39B-204ENST00000505732 KDM2AQ9Y2K7 1162 aa29.25■■■□□ 2.27
TTC39B-204ENST00000505732 CCDC7Q96M83 1385 aa29.25■■■□□ 2.27
TTC39B-204ENST00000505732 ATP7AQ04656 1500 aa29.2■■■□□ 2.26
TTC39B-204ENST00000505732 RALGAPBQ86X10 1494 aa29.2■■■□□ 2.26
TTC39B-204ENST00000505732 USP47Q96K76 1375 aa29.19■■■□□ 2.26
TTC39B-204ENST00000505732 MYT1LQ9UL68 1186 aa29.19■■■□□ 2.26
TTC39B-204ENST00000505732 INO80Q9ULG1 1556 aaPredicted RBP29.18■■■□□ 2.26
TTC39B-204ENST00000505732 KIF7Q2M1P5 1343 aa29.17■■■□□ 2.26
TTC39B-204ENST00000505732 ATP10AO60312 1499 aa29.17■■■□□ 2.26
TTC39B-204ENST00000505732 CNTLNQ9NXG0 1405 aa29.16■■■□□ 2.26
TTC39B-204ENST00000505732 CD109Q6YHK3 1445 aa29.16■■■□□ 2.26
TTC39B-204ENST00000505732 RGL3Q3MIN7 710 aa29.15■■■□□ 2.26
TTC39B-204ENST00000505732 CARD11Q9BXL7 1154 aa29.14■■■□□ 2.26
TTC39B-204ENST00000505732 KDM5CP41229 1560 aa29.11■■■□□ 2.25
TTC39B-204ENST00000505732 DHX29Q7Z478 1369 aaKnown RBP29.11■■■□□ 2.25
TTC39B-204ENST00000505732 KIF3BO15066 747 aa29.09■■■□□ 2.25
TTC39B-204ENST00000505732 ZNF518AQ6AHZ1 1483 aa29.07■■■□□ 2.24
TTC39B-204ENST00000505732 PRAG1Q86YV5 1406 aa29.07■■■□□ 2.24
TTC39B-204ENST00000505732 DEPDC5O75140 1603 aa29.07■■■□□ 2.24
TTC39B-204ENST00000505732 A2MP01023 1474 aa29.06■■■□□ 2.24
TTC39B-204ENST00000505732 POLR1AO95602 1720 aaPredicted RBP29.05■■■□□ 2.24
TTC39B-204ENST00000505732 KANK1Q14678 1352 aa29.04■■■□□ 2.24
TTC39B-204ENST00000505732 ROCK2O75116 1388 aaKnown RBP29.04■■■□□ 2.24
TTC39B-204ENST00000505732 BCORL1Q5H9F3 1711 aa29.03■■■□□ 2.24
TTC39B-204ENST00000505732 E9PCH4 1651 aa29.02■■■□□ 2.24
TTC39B-204ENST00000505732 KIDINS220Q9ULH0 1771 aa29.01■■■□□ 2.24
TTC39B-204ENST00000505732 CFAP74Q9C0B2 1584 aa29.01■■■□□ 2.23
TTC39B-204ENST00000505732 ARID4BQ4LE39 1312 aaPredicted RBP29.01■■■□□ 2.23
TTC39B-204ENST00000505732 CYB5RLQ6IPT4 315 aa29■■■□□ 2.23
TTC39B-204ENST00000505732 VWDEQ8N2E2 1590 aa28.99■■■□□ 2.23
TTC39B-204ENST00000505732 POGZQ7Z3K3 1410 aa28.99■■■□□ 2.23
TTC39B-204ENST00000505732 ST20-MTHFSA0A0A6YYL1 179 aa28.99■■■□□ 2.23
TTC39B-204ENST00000505732 EIF2AK4Q9P2K8 1649 aaKnown RBP28.99■■■□□ 2.23
TTC39B-204ENST00000505732 PTPRTO14522 1441 aa28.98■■■□□ 2.23
TTC39B-204ENST00000505732 NBPF1Q3BBV0 1214 aa28.96■■■□□ 2.23
TTC39B-204ENST00000505732 PRKRIP1Q9H875 184 aaPredicted RBP28.96■■■□□ 2.23
TTC39B-204ENST00000505732 TRPM1Q7Z4N2 1603 aa28.96■■■□□ 2.23
TTC39B-204ENST00000505732 TET3O43151 1660 aa28.96■■■□□ 2.23
TTC39B-204ENST00000505732 POLR3GLQ9BT43 218 aa28.95■■■□□ 2.23
TTC39B-204ENST00000505732 TRPM2O94759 1503 aa28.95■■■□□ 2.22
TTC39B-204ENST00000505732 PRDM15P57071 1507 aaPredicted RBP28.94■■■□□ 2.22
TTC39B-204ENST00000505732 MROH1Q8NDA8 1641 aa28.93■■■□□ 2.22
TTC39B-204ENST00000505732 MLH3Q9UHC1 1453 aa28.93■■■□□ 2.22
TTC39B-204ENST00000505732 GPRASP1Q5JY77 1395 aa28.92■■■□□ 2.22
TTC39B-204ENST00000505732 NEO1Q92859 1461 aa28.91■■■□□ 2.22
TTC39B-204ENST00000505732 SPHKAPQ2M3C7 1700 aa28.9■■■□□ 2.22
TTC39B-204ENST00000505732 RAPGEF3O95398 923 aa28.86■■■□□ 2.21
TTC39B-204ENST00000505732 CLTCL1P53675 1640 aa28.85■■■□□ 2.21
TTC39B-204ENST00000505732 HECW2Q9P2P5 1572 aa28.85■■■□□ 2.21
TTC39B-204ENST00000505732 CCDC184Q52MB2 194 aa28.84■■■□□ 2.21
TTC39B-204ENST00000505732 RIMBP3CA6NJZ7 1639 aa28.83■■■□□ 2.21
TTC39B-204ENST00000505732 RIMBP3BA6NNM3 1639 aa28.83■■■□□ 2.21
TTC39B-204ENST00000505732 RIMBP3Q9UFD9 1639 aa28.83■■■□□ 2.21
TTC39B-204ENST00000505732 FRMPD1Q5SYB0 1578 aa28.82■■■□□ 2.2
TTC39B-204ENST00000505732 CEP152O94986 1710 aa28.81■■■□□ 2.2
TTC39B-204ENST00000505732 LAMC1P11047 1609 aa28.81■■■□□ 2.2
TTC39B-204ENST00000505732 STAC3Q96MF2 364 aa28.8■■■□□ 2.2
TTC39B-204ENST00000505732 EFCAB6Q5THR3 1501 aa28.8■■■□□ 2.2
TTC39B-204ENST00000505732 LMTK2Q8IWU2 1503 aa28.8■■■□□ 2.2
TTC39B-204ENST00000505732 RNF17Q9BXT8 1623 aaKnown RBP28.8■■■□□ 2.2
TTC39B-204ENST00000505732 GGT6Q6P531 493 aa28.78■■■□□ 2.2
TTC39B-204ENST00000505732 MAP3K4Q9Y6R4 1608 aa28.78■■■□□ 2.2
TTC39B-204ENST00000505732 ABCA6Q8N139 1617 aa28.76■■■□□ 2.2
TTC39B-204ENST00000505732 PPRC1Q5VV67 1664 aaKnown RBP28.75■■■□□ 2.19
TTC39B-204ENST00000505732 MRS2Q9HD23 443 aa28.75■■■□□ 2.19
TTC39B-204ENST00000505732 GLI2P10070 1586 aa28.75■■■□□ 2.19
TTC39B-204ENST00000505732 MADDQ8WXG6 1647 aa28.73■■■□□ 2.19
TTC39B-204ENST00000505732 TESK2Q96S53 571 aa28.73■■■□□ 2.19
TTC39B-204ENST00000505732 HNRNPUQ00839 825 aaKnown RBP eCLIP28.72■■■□□ 2.19
TTC39B-204ENST00000505732 UGGT1Q9NYU2 1555 aa28.72■■■□□ 2.19
TTC39B-204ENST00000505732 FAM69CQ0P6D2 419 aa28.71■■■□□ 2.19
TTC39B-204ENST00000505732 NEURL4Q96JN8 1562 aa28.71■■■□□ 2.19
TTC39B-204ENST00000505732 CNGB1Q14028 1251 aaPredicted RBP28.7■■■□□ 2.19
TTC39B-204ENST00000505732 WASHC2CQ9Y4E1 1318 aa28.69■■■□□ 2.18
TTC39B-204ENST00000505732 RICTORQ6R327 1708 aa28.67■■■□□ 2.18
TTC39B-204ENST00000505732 FAM9BQ8IZU0 186 aa28.67■■■□□ 2.18
TTC39B-204ENST00000505732 DIP2CQ9Y2E4 1556 aa28.66■■■□□ 2.18
TTC39B-204ENST00000505732 NPATQ14207 1427 aa28.66■■■□□ 2.18
TTC39B-204ENST00000505732 COL17A1Q9UMD9 1497 aaPredicted RBP28.65■■■□□ 2.18
TTC39B-204ENST00000505732 DISP3Q9P2K9 1392 aa28.65■■■□□ 2.18
TTC39B-204ENST00000505732 SUPT16HQ9Y5B9 1047 aaKnown RBP28.64■■■□□ 2.18
TTC39B-204ENST00000505732 TMF1P82094 1093 aa28.63■■■□□ 2.17
TTC39B-204ENST00000505732 ABCC3O15438 1527 aa28.63■■■□□ 2.17
TTC39B-204ENST00000505732 YEATS2Q9ULM3 1422 aa28.62■■■□□ 2.17
TTC39B-204ENST00000505732 DIP2BQ9P265 1576 aa28.61■■■□□ 2.17
TTC39B-204ENST00000505732 KIF1BO60333 1816 aa28.6■■■□□ 2.17
TTC39B-204ENST00000505732 MYOM2P54296 1465 aa28.58■■■□□ 2.17
TTC39B-204ENST00000505732 ADGRF5Q8IZF2 1346 aa28.58■■■□□ 2.17
TTC39B-204ENST00000505732 SCAF11Q99590 1463 aaKnown RBP28.58■■■□□ 2.17
TTC39B-204ENST00000505732 CHGAP10645 457 aaKnown RBP28.57■■■□□ 2.16
TTC39B-204ENST00000505732 IQGAP1P46940 1657 aa28.56■■■□□ 2.16
TTC39B-204ENST00000505732 CFAP70Q5T0N1 1121 aa28.55■■■□□ 2.16
TTC39B-204ENST00000505732 PER1O15534 1290 aaPredicted RBP28.54■■■□□ 2.16
TTC39B-204ENST00000505732 MROH2AA6NES4 1674 aa28.54■■■□□ 2.16
TTC39B-204ENST00000505732 RALBP1Q15311 655 aa28.53■■■□□ 2.16
TTC39B-204ENST00000505732 KTN1Q86UP2 1357 aaKnown RBP28.53■■■□□ 2.16
TTC39B-204ENST00000505732 ADGRB3O60242 1522 aa28.53■■■□□ 2.16
TTC39B-204ENST00000505732 CFAP65Q6ZU64 1925 aaKnown RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 201.1 ms