RNA–Protein interactions for RNA: ENST00000504606.1

TRIO-206, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-206ENST00000504606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.273e-7■■□□□ 14.2
TRIO-206ENST00000504606 NUP155O75694 1391 aa16.75■□□□□ 0.27
TRIO-206ENST00000504606 KDM5DQ9BY66 1539 aa16.75■□□□□ 0.27
TRIO-206ENST00000504606 BCORL1Q5H9F3 1711 aa16.74■□□□□ 0.27
TRIO-206ENST00000504606 DEPDC5O75140 1603 aa16.74■□□□□ 0.27
TRIO-206ENST00000504606 PZPP20742 1482 aa16.73■□□□□ 0.27
TRIO-206ENST00000504606 RNF17Q9BXT8 1623 aaKnown RBP16.72■□□□□ 0.27
TRIO-206ENST00000504606 MPHOSPH9Q99550 1183 aa16.72■□□□□ 0.27
TRIO-206ENST00000504606 AGLP35573 1532 aa16.71■□□□□ 0.27
TRIO-206ENST00000504606 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
TRIO-206ENST00000504606 PRDM15P57071 1507 aaPredicted RBP16.7■□□□□ 0.26
TRIO-206ENST00000504606 IQGAP3Q86VI3 1631 aa16.7■□□□□ 0.26
TRIO-206ENST00000504606 MROH1Q8NDA8 1641 aa16.7■□□□□ 0.26
TRIO-206ENST00000504606 SIGLEC1Q9BZZ2 1709 aa16.7■□□□□ 0.26
TRIO-206ENST00000504606 FAM135AQ9P2D6 1515 aa16.7■□□□□ 0.26
TRIO-206ENST00000504606 KANK1Q14678 1352 aa16.69■□□□□ 0.26
TRIO-206ENST00000504606 GGT6Q6P531 493 aa16.69■□□□□ 0.26
TRIO-206ENST00000504606 VWDEQ8N2E2 1590 aa16.66■□□□□ 0.26
TRIO-206ENST00000504606 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
TRIO-206ENST00000504606 PKD2Q13563 968 aa16.64■□□□□ 0.25
TRIO-206ENST00000504606 CEP152O94986 1710 aa16.64■□□□□ 0.25
TRIO-206ENST00000504606 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
TRIO-206ENST00000504606 MLECQ14165 292 aa16.63■□□□□ 0.25
TRIO-206ENST00000504606 FOXD1Q16676 465 aa16.63■□□□□ 0.25
TRIO-206ENST00000504606 TET3O43151 1660 aa16.62■□□□□ 0.25
TRIO-206ENST00000504606 ABCC3O15438 1527 aa16.61■□□□□ 0.25
TRIO-206ENST00000504606 LMTK2Q8IWU2 1503 aa16.61■□□□□ 0.25
TRIO-206ENST00000504606 ZC3H13Q5T200 1668 aaKnown RBP16.61■□□□□ 0.25
TRIO-206ENST00000504606 WASHC2CQ9Y4E1 1318 aa16.61■□□□□ 0.25
TRIO-206ENST00000504606 E9PCH4 1651 aa16.59■□□□□ 0.25
TRIO-206ENST00000504606 PPP6R1Q9UPN7 881 aa16.58■□□□□ 0.24
TRIO-206ENST00000504606 EFCAB6Q5THR3 1501 aa16.58■□□□□ 0.24
TRIO-206ENST00000504606 CAMSAP1Q5T5Y3 1602 aa16.58■□□□□ 0.24
TRIO-206ENST00000504606 ANKRD30BQ9BXX2 1392 aa16.56■□□□□ 0.24
TRIO-206ENST00000504606 CLTCQ00610 1675 aaKnown RBP16.56■□□□□ 0.24
TRIO-206ENST00000504606 SIN3AQ96ST3 1273 aa16.55■□□□□ 0.24
TRIO-206ENST00000504606 ESF1Q9H501 851 aaKnown RBP16.54■□□□□ 0.24
TRIO-206ENST00000504606 NEUROD1Q13562 356 aa16.53■□□□□ 0.24
TRIO-206ENST00000504606 NPATQ14207 1427 aa16.53■□□□□ 0.24
TRIO-206ENST00000504606 ZEB1P37275 1124 aaPredicted RBP16.52■□□□□ 0.24
TRIO-206ENST00000504606 SPHKAPQ2M3C7 1700 aa16.52■□□□□ 0.24
TRIO-206ENST00000504606 RPRD2Q5VT52 1461 aaKnown RBP16.52■□□□□ 0.23
TRIO-206ENST00000504606 ARHGAP31Q2M1Z3 1444 aa16.51■□□□□ 0.23
TRIO-206ENST00000504606 FER1L4A9Z1Z3 1794 aa16.5■□□□□ 0.23
TRIO-206ENST00000504606 CNTLNQ9NXG0 1405 aa16.5■□□□□ 0.23
TRIO-206ENST00000504606 PLA2R1Q13018 1463 aa16.49■□□□□ 0.23
TRIO-206ENST00000504606 TRPM2O94759 1503 aa16.49■□□□□ 0.23
TRIO-206ENST00000504606 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
TRIO-206ENST00000504606 PTPRTO14522 1441 aa16.48■□□□□ 0.23
TRIO-206ENST00000504606 CFAP65Q6ZU64 1925 aaKnown RBP16.48■□□□□ 0.23
TRIO-206ENST00000504606 MROH2AA6NES4 1674 aa16.47■□□□□ 0.23
TRIO-206ENST00000504606 ZMYM3Q14202 1370 aa16.46■□□□□ 0.23
TRIO-206ENST00000504606 PREX1Q8TCU6 1659 aa16.46■□□□□ 0.23
TRIO-206ENST00000504606 MADDQ8WXG6 1647 aa16.45■□□□□ 0.22
TRIO-206ENST00000504606 ADAMTSL3P82987 1691 aa16.45■□□□□ 0.22
TRIO-206ENST00000504606 NOS1P29475 1434 aa16.45■□□□□ 0.22
TRIO-206ENST00000504606 TONSLQ96HA7 1378 aa16.44■□□□□ 0.22
TRIO-206ENST00000504606 CLTCL1P53675 1640 aa16.44■□□□□ 0.22
TRIO-206ENST00000504606 ERVK-7P63135 1459 aa16.43■□□□□ 0.22
TRIO-206ENST00000504606 FBXO31Q5XUX0 539 aaPredicted RBP16.43■□□□□ 0.22
TRIO-206ENST00000504606 RIMS1Q86UR5 1692 aaKnown RBP16.43■□□□□ 0.22
TRIO-206ENST00000504606 SYNMO15061 1565 aa16.42■□□□□ 0.22
TRIO-206ENST00000504606 UGGT1Q9NYU2 1555 aa16.42■□□□□ 0.22
TRIO-206ENST00000504606 C3P01024 1663 aa16.41■□□□□ 0.22
TRIO-206ENST00000504606 TIMELESSQ9UNS1 1208 aa16.41■□□□□ 0.22
TRIO-206ENST00000504606 SPATA31D1Q6ZQQ2 1576 aa16.41■□□□□ 0.22
TRIO-206ENST00000504606 PIK3C2BO00750 1634 aa16.38■□□□□ 0.21
TRIO-206ENST00000504606 CEBPAP49715 358 aaPredicted RBP16.38■□□□□ 0.21
TRIO-206ENST00000504606 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
TRIO-206ENST00000504606 KIF1BO60333 1816 aa16.38■□□□□ 0.21
TRIO-206ENST00000504606 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
TRIO-206ENST00000504606 SLC52A1Q9NWF4 448 aa16.36■□□□□ 0.21
TRIO-206ENST00000504606 CHGAP10645 457 aaKnown RBP16.35■□□□□ 0.21
TRIO-206ENST00000504606 RGL3Q3MIN7 710 aa16.35■□□□□ 0.21
TRIO-206ENST00000504606 TNRQ92752 1358 aa16.35■□□□□ 0.21
TRIO-206ENST00000504606 SPATA31E1Q6ZUB1 1445 aa16.35■□□□□ 0.21
TRIO-206ENST00000504606 IDI1Q13907 227 aa16.34■□□□□ 0.21
TRIO-206ENST00000504606 ADGRB3O60242 1522 aa16.33■□□□□ 0.2
TRIO-206ENST00000504606 NEURL4Q96JN8 1562 aa16.33■□□□□ 0.2
TRIO-206ENST00000504606 PPP1R15AO75807 674 aaPredicted RBP16.31■□□□□ 0.2
TRIO-206ENST00000504606 PTPRMP28827 1452 aa16.3■□□□□ 0.2
TRIO-206ENST00000504606 ZNF326Q5BKZ1 582 aaKnown RBP16.29■□□□□ 0.2
TRIO-206ENST00000504606 DCAF11Q8TEB1 546 aa16.29■□□□□ 0.2
TRIO-206ENST00000504606 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
TRIO-206ENST00000504606 TMEM131LA2VDJ0 1609 aa16.29■□□□□ 0.2
TRIO-206ENST00000504606 KDM2AQ9Y2K7 1162 aa16.28■□□□□ 0.2
TRIO-206ENST00000504606 NLRP1Q9C000 1473 aa16.28■□□□□ 0.2
TRIO-206ENST00000504606 MYO5BQ9ULV0 1848 aa16.27■□□□□ 0.2
TRIO-206ENST00000504606 MYO3AQ8NEV4 1616 aa16.27■□□□□ 0.19
TRIO-206ENST00000504606 IFT172Q9UG01 1749 aa16.25■□□□□ 0.19
TRIO-206ENST00000504606 KDM4FA0A1W2PPD8 638 aa16.25■□□□□ 0.19
TRIO-206ENST00000504606 A2ML1A8K2U0 1454 aa16.24■□□□□ 0.19
TRIO-206ENST00000504606 PPLO60437 1756 aa16.23■□□□□ 0.19
TRIO-206ENST00000504606 RPGRIP1LQ68CZ1 1315 aa16.23■□□□□ 0.19
TRIO-206ENST00000504606 UBR1Q8IWV7 1749 aa16.23■□□□□ 0.19
TRIO-206ENST00000504606 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
TRIO-206ENST00000504606 KDM5AP29375 1690 aaKnown RBP16.23■□□□□ 0.19
TRIO-206ENST00000504606 UHRF1BP1Q6BDS2 1440 aa16.22■□□□□ 0.19
TRIO-206ENST00000504606 STAC3Q96MF2 364 aa16.22■□□□□ 0.19
TRIO-206ENST00000504606 NEXMIFQ5QGS0 1516 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms