RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 MLH3Q9UHC1 1453 aa12.69□□□□□ -0.38
RFC1-207ENST00000504554 MLECQ14165 292 aa12.68□□□□□ -0.38
RFC1-207ENST00000504554 C9orf84Q5VXU9 1444 aa12.68□□□□□ -0.38
RFC1-207ENST00000504554 DIP2CQ9Y2E4 1556 aa12.68□□□□□ -0.38
RFC1-207ENST00000504554 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
RFC1-207ENST00000504554 HECW2Q9P2P5 1572 aa12.67□□□□□ -0.38
RFC1-207ENST00000504554 ABCA6Q8N139 1617 aa12.66□□□□□ -0.38
RFC1-207ENST00000504554 MADDQ8WXG6 1647 aa12.66□□□□□ -0.38
RFC1-207ENST00000504554 PTPRMP28827 1452 aa12.66□□□□□ -0.38
RFC1-207ENST00000504554 MBD5Q9P267 1494 aa12.66□□□□□ -0.38
RFC1-207ENST00000504554 MYT1LQ9UL68 1186 aa12.66□□□□□ -0.38
RFC1-207ENST00000504554 MAP3K1Q13233 1512 aa12.66□□□□□ -0.38
RFC1-207ENST00000504554 KIDINS220Q9ULH0 1771 aa12.64□□□□□ -0.39
RFC1-207ENST00000504554 FKBP8Q14318 412 aa12.64□□□□□ -0.39
RFC1-207ENST00000504554 SUPT6HQ7KZ85 1726 aaKnown RBP12.64□□□□□ -0.39
RFC1-207ENST00000504554 SPAG9O60271 1321 aaKnown RBP12.63□□□□□ -0.39
RFC1-207ENST00000504554 PLEKHH2Q8IVE3 1493 aa12.63□□□□□ -0.39
RFC1-207ENST00000504554 REREQ9P2R6 1566 aa12.61□□□□□ -0.39
RFC1-207ENST00000504554 CAMSAP2Q08AD1 1489 aa12.61□□□□□ -0.39
RFC1-207ENST00000504554 RIMS1Q86UR5 1692 aaKnown RBP12.61□□□□□ -0.39
RFC1-207ENST00000504554 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
RFC1-207ENST00000504554 ATP7AQ04656 1500 aa12.59□□□□□ -0.39
RFC1-207ENST00000504554 AGLP35573 1532 aa12.58□□□□□ -0.4
RFC1-207ENST00000504554 CEBPAP49715 358 aaPredicted RBP12.58□□□□□ -0.4
RFC1-207ENST00000504554 MYOM3Q5VTT5 1437 aa12.57□□□□□ -0.4
RFC1-207ENST00000504554 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
RFC1-207ENST00000504554 A2MP01023 1474 aa12.56□□□□□ -0.4
RFC1-207ENST00000504554 CCDC141Q6ZP82 1450 aa12.56□□□□□ -0.4
RFC1-207ENST00000504554 PLXNC1O60486 1568 aa12.56□□□□□ -0.4
RFC1-207ENST00000504554 RTEL1-TNFRSF6BF6WH68 1400 aa12.55□□□□□ -0.4
RFC1-207ENST00000504554 MIA2Q96PC5 1412 aa12.54□□□□□ -0.4
RFC1-207ENST00000504554 FER1L4A9Z1Z3 1794 aa12.54□□□□□ -0.4
RFC1-207ENST00000504554 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
RFC1-207ENST00000504554 ARHGEF5Q12774 1597 aa12.53□□□□□ -0.4
RFC1-207ENST00000504554 LMTK3Q96Q04 1460 aa12.53□□□□□ -0.4
RFC1-207ENST00000504554 GABBR2O75899 941 aa12.52□□□□□ -0.41
RFC1-207ENST00000504554 DHX29Q7Z478 1369 aaKnown RBP12.52□□□□□ -0.41
RFC1-207ENST00000504554 RSPH4AQ5TD94 716 aa12.51□□□□□ -0.41
RFC1-207ENST00000504554 HSPA2P54652 639 aa12.5□□□□□ -0.41
RFC1-207ENST00000504554 GGT6Q6P531 493 aa12.5□□□□□ -0.41
RFC1-207ENST00000504554 FGD6Q6ZV73 1430 aa12.5□□□□□ -0.41
RFC1-207ENST00000504554 TCOF1Q13428 1488 aaKnown RBP12.49□□□□□ -0.41
RFC1-207ENST00000504554 ABCC5O15440 1437 aa12.49□□□□□ -0.41
RFC1-207ENST00000504554 TSPY4P0CV99 314 aa12.49□□□□□ -0.41
RFC1-207ENST00000504554 TSPY10P0CW01 314 aa12.49□□□□□ -0.41
RFC1-207ENST00000504554 ADGBQ8N7X0 1667 aa12.48□□□□□ -0.41
RFC1-207ENST00000504554 PTPN23Q9H3S7 1636 aa12.48□□□□□ -0.41
RFC1-207ENST00000504554 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
RFC1-207ENST00000504554 PPARGC1BQ86YN6 1023 aaKnown RBP12.48□□□□□ -0.41
RFC1-207ENST00000504554 MAST1Q9Y2H9 1570 aa12.47□□□□□ -0.41
RFC1-207ENST00000504554 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
RFC1-207ENST00000504554 ZMYM3Q14202 1370 aa12.46□□□□□ -0.41
RFC1-207ENST00000504554 C3P01024 1663 aa12.46□□□□□ -0.41
RFC1-207ENST00000504554 KIF3BO15066 747 aa12.46□□□□□ -0.41
RFC1-207ENST00000504554 CREBZFQ9NS37 354 aa12.46□□□□□ -0.41
RFC1-207ENST00000504554 CNTLNQ9NXG0 1405 aa12.45□□□□□ -0.42
RFC1-207ENST00000504554 ESF1Q9H501 851 aaKnown RBP12.45□□□□□ -0.42
RFC1-207ENST00000504554 DAPK1P53355 1430 aa12.45□□□□□ -0.42
RFC1-207ENST00000504554 CLTCQ00610 1675 aaKnown RBP12.43□□□□□ -0.42
RFC1-207ENST00000504554 CHIC2Q9UKJ5 165 aa12.43□□□□□ -0.42
RFC1-207ENST00000504554 RRP7BPQ9NSQ0 103 aa12.42□□□□□ -0.42
RFC1-207ENST00000504554 SHANK2Q9UPX8 1470 aa12.41□□□□□ -0.42
RFC1-207ENST00000504554 DNMT1P26358 1616 aaKnown RBP12.41□□□□□ -0.42
RFC1-207ENST00000504554 FAM50AQ14320 339 aaKnown RBP12.41□□□□□ -0.42
RFC1-207ENST00000504554 PTPRKQ15262 1439 aa12.41□□□□□ -0.42
RFC1-207ENST00000504554 KIF15Q9NS87 1388 aa12.41□□□□□ -0.42
RFC1-207ENST00000504554 UHRF1BP1Q6BDS2 1440 aa12.4□□□□□ -0.42
RFC1-207ENST00000504554 FBXO31Q5XUX0 539 aaPredicted RBP12.4□□□□□ -0.42
RFC1-207ENST00000504554 MROH2AA6NES4 1674 aa12.4□□□□□ -0.42
RFC1-207ENST00000504554 CROCC2H7BZ55 1655 aa12.4□□□□□ -0.42
RFC1-207ENST00000504554 PREX1Q8TCU6 1659 aa12.39□□□□□ -0.43
RFC1-207ENST00000504554 MROH1Q8NDA8 1641 aa12.39□□□□□ -0.43
RFC1-207ENST00000504554 NPATQ14207 1427 aa12.38□□□□□ -0.43
RFC1-207ENST00000504554 DUOX2Q9NRD8 1548 aa12.38□□□□□ -0.43
RFC1-207ENST00000504554 AMER1Q5JTC6 1135 aaPredicted RBP12.38□□□□□ -0.43
RFC1-207ENST00000504554 WASHC2CQ9Y4E1 1318 aa12.37□□□□□ -0.43
RFC1-207ENST00000504554 NCOA1Q15788 1441 aa12.37□□□□□ -0.43
RFC1-207ENST00000504554 KDM5DQ9BY66 1539 aa12.37□□□□□ -0.43
RFC1-207ENST00000504554 RNF17Q9BXT8 1623 aaKnown RBP12.37□□□□□ -0.43
RFC1-207ENST00000504554 ABCC3O15438 1527 aa12.36□□□□□ -0.43
RFC1-207ENST00000504554 ADGRL2O95490 1459 aa12.35□□□□□ -0.43
RFC1-207ENST00000504554 EIF2AK4Q9P2K8 1649 aaKnown RBP12.35□□□□□ -0.43
RFC1-207ENST00000504554 ERBINQ96RT1 1412 aa12.35□□□□□ -0.43
RFC1-207ENST00000504554 PZPP20742 1482 aa12.34□□□□□ -0.43
RFC1-207ENST00000504554 ANKRD30AQ9BXX3 1397 aa12.34□□□□□ -0.43
RFC1-207ENST00000504554 FAM135AQ9P2D6 1515 aa12.33□□□□□ -0.44
RFC1-207ENST00000504554 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
RFC1-207ENST00000504554 STRCQ7RTU9 1775 aa12.33□□□□□ -0.44
RFC1-207ENST00000504554 MYO3AQ8NEV4 1616 aa12.32□□□□□ -0.44
RFC1-207ENST00000504554 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
RFC1-207ENST00000504554 TNRQ92752 1358 aa12.31□□□□□ -0.44
RFC1-207ENST00000504554 NCKAP5LQ9HCH0 1330 aa12.31□□□□□ -0.44
RFC1-207ENST00000504554 PRDM15P57071 1507 aaPredicted RBP12.31□□□□□ -0.44
RFC1-207ENST00000504554 ITGAEP38570 1179 aa12.3□□□□□ -0.44
RFC1-207ENST00000504554 CEP170BQ9Y4F5 1589 aaPredicted RBP12.3□□□□□ -0.44
RFC1-207ENST00000504554 CAMSAP1Q5T5Y3 1602 aa12.29□□□□□ -0.44
RFC1-207ENST00000504554 POTEIP0CG38 1075 aa12.29□□□□□ -0.44
RFC1-207ENST00000504554 PROM2Q8N271 834 aa12.29□□□□□ -0.44
RFC1-207ENST00000504554 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
RFC1-207ENST00000504554 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms