RNA–Protein interactions for RNA: ENST00000504350.1

COPG1-202, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-202ENST00000504350 SAMD9Q5K651 1589 aa8.18□□□□□ -1.1
COPG1-202ENST00000504350 KDM6BO15054 1643 aa8.18□□□□□ -1.1
COPG1-202ENST00000504350 CALD1Q05682 793 aaKnown RBP8.18□□□□□ -1.1
COPG1-202ENST00000504350 NAP1L5Q96NT1 182 aaPredicted RBP8.18□□□□□ -1.1
COPG1-202ENST00000504350 PNNQ9H307 717 aaKnown RBP8.18□□□□□ -1.1
COPG1-202ENST00000504350 KIF7Q2M1P5 1343 aa8.18□□□□□ -1.1
COPG1-202ENST00000504350 BRD4O60885 1362 aaPredicted RBP8.18□□□□□ -1.1
COPG1-202ENST00000504350 PBRM1Q86U86 1689 aa8.18□□□□□ -1.1
COPG1-202ENST00000504350 TPM2P07951 284 aa8.17□□□□□ -1.1
COPG1-202ENST00000504350 EXOC6Q8TAG9 804 aa8.17□□□□□ -1.1
COPG1-202ENST00000504350 KDM4FA0A1W2PPD8 638 aa8.16□□□□□ -1.1
COPG1-202ENST00000504350 TSPOAP1O95153 1857 aa8.16□□□□□ -1.1
COPG1-202ENST00000504350 GAPVD1Q14C86 1478 aa8.16□□□□□ -1.1
COPG1-202ENST00000504350 ARID4BQ4LE39 1312 aaPredicted RBP8.16□□□□□ -1.1
COPG1-202ENST00000504350 ADGBQ8N7X0 1667 aa8.15□□□□□ -1.1
COPG1-202ENST00000504350 BLMP54132 1417 aaPredicted RBP8.15□□□□□ -1.1
COPG1-202ENST00000504350 FRAT2O75474 233 aaPredicted RBP8.15□□□□□ -1.1
COPG1-202ENST00000504350 RALGAPBQ86X10 1494 aa8.14□□□□□ -1.11
COPG1-202ENST00000504350 KIF15Q9NS87 1388 aa8.14□□□□□ -1.11
COPG1-202ENST00000504350 KDM2BQ8NHM5 1336 aa8.14□□□□□ -1.11
COPG1-202ENST00000504350 PDE3BQ13370 1112 aa8.14□□□□□ -1.11
COPG1-202ENST00000504350 GRIN2BQ13224 1484 aa8.13□□□□□ -1.11
COPG1-202ENST00000504350 NLRP1Q9C000 1473 aa8.13□□□□□ -1.11
COPG1-202ENST00000504350 FHOD3Q2V2M9 1422 aa8.13□□□□□ -1.11
COPG1-202ENST00000504350 FAM161AQ3B820 660 aa8.13□□□□□ -1.11
COPG1-202ENST00000504350 RCAN3Q9UKA8 241 aa8.13□□□□□ -1.11
COPG1-202ENST00000504350 DNMT1P26358 1616 aaKnown RBP8.12□□□□□ -1.11
COPG1-202ENST00000504350 SCAPERQ9BY12 1400 aa8.12□□□□□ -1.11
COPG1-202ENST00000504350 FSD2A1L4K1 749 aa8.11□□□□□ -1.11
COPG1-202ENST00000504350 AAMPQ13685 434 aa8.11□□□□□ -1.11
COPG1-202ENST00000504350 C8orf34Q49A92 452 aa8.11□□□□□ -1.11
COPG1-202ENST00000504350 CENPQQ7L2Z9 268 aaPredicted RBP8.11□□□□□ -1.11
COPG1-202ENST00000504350 ARHGEF12Q9NZN5 1544 aa8.11□□□□□ -1.11
COPG1-202ENST00000504350 PNISRQ8TF01 805 aaKnown RBP8.1□□□□□ -1.11
COPG1-202ENST00000504350 POGKQ9P215 609 aa8.1□□□□□ -1.11
COPG1-202ENST00000504350 ISY1Q9ULR0 285 aaKnown RBP8.1□□□□□ -1.11
COPG1-202ENST00000504350 LAMC1P11047 1609 aa8.1□□□□□ -1.11
COPG1-202ENST00000504350 CEP170Q5SW79 1584 aa8.1□□□□□ -1.11
COPG1-202ENST00000504350 IGF1RP08069 1367 aa8.1□□□□□ -1.11
COPG1-202ENST00000504350 EIF3AQ14152 1382 aaKnown RBP8.1□□□□□ -1.11
COPG1-202ENST00000504350 ZMYM3Q14202 1370 aa8.1□□□□□ -1.11
COPG1-202ENST00000504350 CARMIL1Q5VZK9 1371 aa8.1□□□□□ -1.11
COPG1-202ENST00000504350 ANKRD30BQ9BXX2 1392 aa8.1□□□□□ -1.11
COPG1-202ENST00000504350 MYBBP1AQ9BQG0 1328 aaKnown RBP8.09□□□□□ -1.11
COPG1-202ENST00000504350 CROCC2H7BZ55 1655 aa8.09□□□□□ -1.11
COPG1-202ENST00000504350 ITSN2Q9NZM3 1697 aa8.09□□□□□ -1.11
COPG1-202ENST00000504350 C14orf37Q86TY3 774 aa8.09□□□□□ -1.11
COPG1-202ENST00000504350 PDCL3Q9H2J4 239 aa8.09□□□□□ -1.11
COPG1-202ENST00000504350 SHROOM2Q13796 1616 aa8.09□□□□□ -1.11
COPG1-202ENST00000504350 PLXNC1O60486 1568 aa8.09□□□□□ -1.11
COPG1-202ENST00000504350 MTUS2Q5JR59 1369 aa8.09□□□□□ -1.12
COPG1-202ENST00000504350 USP47Q96K76 1375 aa8.09□□□□□ -1.12
COPG1-202ENST00000504350 GOLGA6L3A6NEY3 463 aa8.08□□□□□ -1.12
COPG1-202ENST00000504350 RBM10P98175 930 aaKnown RBP8.08□□□□□ -1.12
COPG1-202ENST00000504350 MAP7D2Q96T17 732 aa8.08□□□□□ -1.12
COPG1-202ENST00000504350 PRDM4Q9UKN5 801 aa8.08□□□□□ -1.12
COPG1-202ENST00000504350 UHRF1BP1Q6BDS2 1440 aa8.08□□□□□ -1.12
COPG1-202ENST00000504350 BECN1Q14457 450 aa8.07□□□□□ -1.12
COPG1-202ENST00000504350 ROCK1Q13464 1354 aa8.07□□□□□ -1.12
COPG1-202ENST00000504350 SLC4A3P48751 1232 aa8.06□□□□□ -1.12
COPG1-202ENST00000504350 CHMP7Q8WUX9 453 aaPredicted RBP8.06□□□□□ -1.12
COPG1-202ENST00000504350 L3MBTL2Q969R5 705 aa8.06□□□□□ -1.12
COPG1-202ENST00000504350 CRBNQ96SW2 442 aa8.06□□□□□ -1.12
COPG1-202ENST00000504350 DMRT2Q9Y5R5 561 aa8.06□□□□□ -1.12
COPG1-202ENST00000504350 EPRSP07814 1512 aaKnown RBP8.06□□□□□ -1.12
COPG1-202ENST00000504350 PARD3Q8TEW0 1356 aa8.06□□□□□ -1.12
COPG1-202ENST00000504350 MAGI3Q5TCQ9 1506 aa8.05□□□□□ -1.12
COPG1-202ENST00000504350 PDIA4P13667 645 aaKnown RBP8.05□□□□□ -1.12
COPG1-202ENST00000504350 TERF1P54274 439 aa8.05□□□□□ -1.12
COPG1-202ENST00000504350 FGD1P98174 961 aa8.05□□□□□ -1.12
COPG1-202ENST00000504350 RALBP1Q15311 655 aa8.05□□□□□ -1.12
COPG1-202ENST00000504350 SYNJ2O15056 1496 aa8.05□□□□□ -1.12
COPG1-202ENST00000504350 ESPNB1AK53 854 aa8.04□□□□□ -1.12
COPG1-202ENST00000504350 XRCC6P12956 609 aaKnown RBP eCLIP8.04□□□□□ -1.12
COPG1-202ENST00000504350 MRE11P49959 708 aa8.04□□□□□ -1.12
COPG1-202ENST00000504350 PLCB2Q00722 1185 aa8.04□□□□□ -1.12
COPG1-202ENST00000504350 NBPF8Q3BBV2 869 aa8.04□□□□□ -1.12
COPG1-202ENST00000504350 SMAP1Q8IYB5 467 aaPredicted RBP8.04□□□□□ -1.12
COPG1-202ENST00000504350 MAGI1Q96QZ7 1491 aaPredicted RBP8.04□□□□□ -1.12
COPG1-202ENST00000504350 HECW2Q9P2P5 1572 aa8.04□□□□□ -1.12
COPG1-202ENST00000504350 DIP2BQ9P265 1576 aa8.03□□□□□ -1.12
COPG1-202ENST00000504350 PZPP20742 1482 aa8.03□□□□□ -1.12
COPG1-202ENST00000504350 TMC1Q8TDI8 760 aa8.03□□□□□ -1.12
COPG1-202ENST00000504350 TRPM1Q7Z4N2 1603 aa8.03□□□□□ -1.12
COPG1-202ENST00000504350 USP19O94966 1318 aa8.03□□□□□ -1.12
COPG1-202ENST00000504350 NINLQ9Y2I6 1382 aa8.02□□□□□ -1.13
COPG1-202ENST00000504350 ANTXR1Q9H6X2 564 aa8.02□□□□□ -1.13
COPG1-202ENST00000504350 ABCC2Q92887 1545 aa8.02□□□□□ -1.13
COPG1-202ENST00000504350 PPRC1Q5VV67 1664 aaKnown RBP8.02□□□□□ -1.13
COPG1-202ENST00000504350 A0A0U1RQG5 324 aaPredicted RBP8.01□□□□□ -1.13
COPG1-202ENST00000504350 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.01□□□□□ -1.13
COPG1-202ENST00000504350 ABCA10Q8WWZ4 1543 aa8.01□□□□□ -1.13
COPG1-202ENST00000504350 KDM5DQ9BY66 1539 aa8.01□□□□□ -1.13
COPG1-202ENST00000504350 ERBB4Q15303 1308 aa8.01□□□□□ -1.13
COPG1-202ENST00000504350 MAPK8IP3Q9UPT6 1336 aa8.01□□□□□ -1.13
COPG1-202ENST00000504350 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
COPG1-202ENST00000504350 PPP4R3CPQ6ZMV5 832 aa8□□□□□ -1.13
COPG1-202ENST00000504350 MTERF4Q7Z6M4 381 aaKnown RBP8□□□□□ -1.13
COPG1-202ENST00000504350 NLRP13Q86W25 1043 aa8□□□□□ -1.13
COPG1-202ENST00000504350 PANK2Q9BZ23 570 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 540 ms