RNA–Protein interactions for RNA: ENST00000504350.1

COPG1-202, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 3

Gene COPG1, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-202ENST00000504350 AEBP2Q6ZN18 517 aaPredicted RBP11.73□□□□□ -0.53
COPG1-202ENST00000504350 NISCHQ9Y2I1 1504 aa11.49□□□□□ -0.57
COPG1-202ENST00000504350 CHIC1Q5VXU3 224 aa11.2□□□□□ -0.62
COPG1-202ENST00000504350 PELP1Q8IZL8 1130 aaKnown RBP10.76□□□□□ -0.69
COPG1-202ENST00000504350 HRCP23327 699 aa10.65□□□□□ -0.7
COPG1-202ENST00000504350 ABCC9O60706 1549 aa10.53□□□□□ -0.72
COPG1-202ENST00000504350 MYT1Q01538 1121 aa10.48□□□□□ -0.73
COPG1-202ENST00000504350 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
COPG1-202ENST00000504350 DNAJC5BQ9UF47 199 aa10.32□□□□□ -0.76
COPG1-202ENST00000504350 CCDC180Q9P1Z9 1646 aa10.32□□□□□ -0.76
COPG1-202ENST00000504350 DCAF1Q9Y4B6 1507 aa10.28□□□□□ -0.76
COPG1-202ENST00000504350 SENP3Q9H4L4 574 aaPredicted RBP10.24□□□□□ -0.77
COPG1-202ENST00000504350 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
COPG1-202ENST00000504350 PPARGC1BQ86YN6 1023 aaKnown RBP10.17□□□□□ -0.78
COPG1-202ENST00000504350 PCGF6Q9BYE7 350 aa10.1□□□□□ -0.79
COPG1-202ENST00000504350 SCAF1Q9H7N4 1312 aaKnown RBP10.09□□□□□ -0.79
COPG1-202ENST00000504350 ZEB1P37275 1124 aaPredicted RBP10.02□□□□□ -0.81
COPG1-202ENST00000504350 PHF23Q9BUL5 403 aaPredicted RBP9.97□□□□□ -0.81
COPG1-202ENST00000504350 TTBK1Q5TCY1 1321 aaPredicted RBP9.97□□□□□ -0.81
COPG1-202ENST00000504350 ZCCHC6Q5VYS8 1495 aaKnown RBP9.91□□□□□ -0.82
COPG1-202ENST00000504350 SHROOM4Q9ULL8 1493 aa9.91□□□□□ -0.82
COPG1-202ENST00000504350 TRIM26Q12899 539 aaPredicted RBP9.9□□□□□ -0.82
COPG1-202ENST00000504350 SUPT5HO00267 1087 aaKnown RBP9.87□□□□□ -0.83
COPG1-202ENST00000504350 ACIN1Q9UKV3 1341 aaKnown RBP9.84□□□□□ -0.83
COPG1-202ENST00000504350 UNC13AQ9UPW8 1703 aa9.82□□□□□ -0.84
COPG1-202ENST00000504350 CENPBP07199 599 aaPredicted RBP9.74□□□□□ -0.85
COPG1-202ENST00000504350 PABPN1Q86U42 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
COPG1-202ENST00000504350 NEUROD1Q13562 356 aa9.71□□□□□ -0.86
COPG1-202ENST00000504350 RB1CC1Q8TDY2 1594 aa9.7□□□□□ -0.86
COPG1-202ENST00000504350 GTF3C3Q9Y5Q9 886 aa9.67□□□□□ -0.86
COPG1-202ENST00000504350 BICRAQ9NZM4 1560 aa9.63□□□□□ -0.87
COPG1-202ENST00000504350 LOC105371045A0A1W2PR82 267 aa9.55□□□□□ -0.88
COPG1-202ENST00000504350 BCL11AQ9H165 835 aa9.54□□□□□ -0.88
COPG1-202ENST00000504350 DNAJC5Q9H3Z4 198 aa9.53□□□□□ -0.88
COPG1-202ENST00000504350 CLSPNQ9HAW4 1339 aa9.53□□□□□ -0.88
COPG1-202ENST00000504350 NACADO15069 1562 aa9.5□□□□□ -0.89
COPG1-202ENST00000504350 CC2D2AQ9P2K1 1620 aa9.49□□□□□ -0.89
COPG1-202ENST00000504350 DIEXFQ68CQ4 756 aaKnown RBP9.49□□□□□ -0.89
COPG1-202ENST00000504350 DCAF8L2P0C7V8 631 aa9.48□□□□□ -0.89
COPG1-202ENST00000504350 DAXXQ9UER7 740 aaPredicted RBP9.48□□□□□ -0.89
COPG1-202ENST00000504350 CECR2Q9BXF3 1484 aa9.43□□□□□ -0.9
COPG1-202ENST00000504350 TRIM41Q8WV44 630 aa9.43□□□□□ -0.9
COPG1-202ENST00000504350 ANP32EQ9BTT0 268 aa9.43□□□□□ -0.9
COPG1-202ENST00000504350 FAM9AQ8IZU1 332 aaPredicted RBP9.42□□□□□ -0.9
COPG1-202ENST00000504350 FOXD1Q16676 465 aa9.4□□□□□ -0.9
COPG1-202ENST00000504350 ERICH6Q7L0X2 663 aa9.37□□□□□ -0.91
COPG1-202ENST00000504350 WRNQ14191 1432 aaPredicted RBP eCLIP9.34□□□□□ -0.91
COPG1-202ENST00000504350 PRKCSHP14314 528 aaPredicted RBP9.34□□□□□ -0.91
COPG1-202ENST00000504350 CCER1Q8TC90 406 aaPredicted RBP9.34□□□□□ -0.91
COPG1-202ENST00000504350 EIF4G1Q04637 1599 aaKnown RBP9.33□□□□□ -0.92
COPG1-202ENST00000504350 ZNF316A6NFI3 1004 aaPredicted RBP9.32□□□□□ -0.92
COPG1-202ENST00000504350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.29□□□□□ -0.92
COPG1-202ENST00000504350 SCRIBQ14160 1630 aa9.27□□□□□ -0.92
COPG1-202ENST00000504350 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
COPG1-202ENST00000504350 APLP2Q06481 763 aa9.25□□□□□ -0.93
COPG1-202ENST00000504350 CSRNP3Q8WYN3 585 aa9.23□□□□□ -0.93
COPG1-202ENST00000504350 SUPT16HQ9Y5B9 1047 aaKnown RBP9.23□□□□□ -0.93
COPG1-202ENST00000504350 YTHDC1Q96MU7 727 aaKnown RBP9.22□□□□□ -0.93
COPG1-202ENST00000504350 RSF1Q96T23 1441 aaPredicted RBP9.21□□□□□ -0.94
COPG1-202ENST00000504350 MIER1Q8N108 512 aa9.18□□□□□ -0.94
COPG1-202ENST00000504350 MYT1LQ9UL68 1186 aa9.11□□□□□ -0.95
COPG1-202ENST00000504350 CEP162Q5TB80 1403 aa9.11□□□□□ -0.95
COPG1-202ENST00000504350 NCBP3Q53F19 620 aaKnown RBP9.1□□□□□ -0.95
COPG1-202ENST00000504350 BAZ1AQ9NRL2 1556 aaPredicted RBP9.08□□□□□ -0.96
COPG1-202ENST00000504350 PLPPR3Q6T4P5 718 aa9.07□□□□□ -0.96
COPG1-202ENST00000504350 TNIKQ9UKE5 1360 aa9.05□□□□□ -0.96
COPG1-202ENST00000504350 EEA1Q15075 1411 aa9.05□□□□□ -0.96
COPG1-202ENST00000504350 CUX2O14529 1486 aa9.03□□□□□ -0.96
COPG1-202ENST00000504350 MSH5O43196 834 aa9.03□□□□□ -0.96
COPG1-202ENST00000504350 NESP48681 1621 aa9.01□□□□□ -0.97
COPG1-202ENST00000504350 FANCIQ9NVI1 1328 aa8.99□□□□□ -0.97
COPG1-202ENST00000504350 KIF21BO75037 1637 aa8.98□□□□□ -0.97
COPG1-202ENST00000504350 ERCC6Q03468 1493 aa8.98□□□□□ -0.97
COPG1-202ENST00000504350 GOLGA3Q08378 1498 aa8.98□□□□□ -0.97
COPG1-202ENST00000504350 EHMT2Q96KQ7 1210 aa8.98□□□□□ -0.97
COPG1-202ENST00000504350 RBM19Q9Y4C8 960 aaKnown RBP8.97□□□□□ -0.97
COPG1-202ENST00000504350 ERICH6BQ5W0A0 696 aa8.95□□□□□ -0.98
COPG1-202ENST00000504350 THOC2Q8NI27 1593 aaKnown RBP8.95□□□□□ -0.98
COPG1-202ENST00000504350 WIZO95785 1651 aa8.94□□□□□ -0.98
COPG1-202ENST00000504350 ABCC8Q09428 1581 aa8.93□□□□□ -0.98
COPG1-202ENST00000504350 KIF21AQ7Z4S6 1674 aa8.91□□□□□ -0.98
COPG1-202ENST00000504350 MROH2BQ7Z745 1585 aa8.91□□□□□ -0.98
COPG1-202ENST00000504350 DHX57Q6P158 1386 aaKnown RBP8.9□□□□□ -0.98
COPG1-202ENST00000504350 NEFLP07196 543 aa8.9□□□□□ -0.98
COPG1-202ENST00000504350 ARXQ96QS3 562 aa8.9□□□□□ -0.98
COPG1-202ENST00000504350 TOP2AP11388 1531 aaKnown RBP8.9□□□□□ -0.99
COPG1-202ENST00000504350 BAZ1BQ9UIG0 1483 aaKnown RBP8.89□□□□□ -0.99
COPG1-202ENST00000504350 VPS8Q8N3P4 1428 aa8.89□□□□□ -0.99
COPG1-202ENST00000504350 CCDC88BA6NC98 1476 aa8.88□□□□□ -0.99
COPG1-202ENST00000504350 SMARCA2P51531 1590 aa8.87□□□□□ -0.99
COPG1-202ENST00000504350 CEP164Q9UPV0 1460 aa8.87□□□□□ -0.99
COPG1-202ENST00000504350 DEKP35659 375 aaKnown RBP8.86□□□□□ -0.99
COPG1-202ENST00000504350 FKBP8Q14318 412 aa8.86□□□□□ -0.99
COPG1-202ENST00000504350 BCANQ96GW7 911 aa8.85□□□□□ -0.99
COPG1-202ENST00000504350 RTN4Q9NQC3 1192 aaKnown RBP8.84□□□□□ -0.99
COPG1-202ENST00000504350 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
COPG1-202ENST00000504350 PIAS4Q8N2W9 510 aaPredicted RBP8.83□□□□□ -1
COPG1-202ENST00000504350 RANGAP1P46060 587 aaPredicted RBP8.82□□□□□ -1
COPG1-202ENST00000504350 POTEDQ86YR6 584 aa8.82□□□□□ -1
COPG1-202ENST00000504350 UBE2Q2Q8WVN8 375 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms