RNA–Protein interactions for RNA: ENST00000503004.5

CLDND1-208, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-208ENST00000503004 TSPY4P0CV99 314 aa7.05□□□□□ -1.28
CLDND1-208ENST00000503004 TSPY10P0CW01 314 aa7.05□□□□□ -1.28
CLDND1-208ENST00000503004 FAM9BQ8IZU0 186 aa7.05□□□□□ -1.28
CLDND1-208ENST00000503004 NUP155O75694 1391 aa7.04□□□□□ -1.28
CLDND1-208ENST00000503004 PTPRGP23470 1445 aa7.04□□□□□ -1.28
CLDND1-208ENST00000503004 SPATA31E1Q6ZUB1 1445 aa7.04□□□□□ -1.28
CLDND1-208ENST00000503004 KIAA1107Q9UPP5 1409 aa7.04□□□□□ -1.28
CLDND1-208ENST00000503004 ABCA8O94911 1581 aa7.04□□□□□ -1.28
CLDND1-208ENST00000503004 IRX6P78412 446 aaPredicted RBP7.04□□□□□ -1.28
CLDND1-208ENST00000503004 C9orf84Q5VXU9 1444 aa7.03□□□□□ -1.28
CLDND1-208ENST00000503004 ADGRL2O95490 1459 aa7.03□□□□□ -1.28
CLDND1-208ENST00000503004 ABCC10Q5T3U5 1492 aa7.03□□□□□ -1.28
CLDND1-208ENST00000503004 ADCY10Q96PN6 1610 aa7.03□□□□□ -1.28
CLDND1-208ENST00000503004 CDC42BPAQ5VT25 1732 aa7.03□□□□□ -1.28
CLDND1-208ENST00000503004 MRS2Q9HD23 443 aa7.03□□□□□ -1.28
CLDND1-208ENST00000503004 KIF15Q9NS87 1388 aa7.02□□□□□ -1.29
CLDND1-208ENST00000503004 ZMYND15Q9H091 742 aa7.02□□□□□ -1.29
CLDND1-208ENST00000503004 CROCC2H7BZ55 1655 aa7.02□□□□□ -1.29
CLDND1-208ENST00000503004 ADGBQ8N7X0 1667 aa7.02□□□□□ -1.29
CLDND1-208ENST00000503004 USP47Q96K76 1375 aa7.01□□□□□ -1.29
CLDND1-208ENST00000503004 FBXO3Q9UK99 471 aa7.01□□□□□ -1.29
CLDND1-208ENST00000503004 SENP3-EIF4A1A0A087X0R7 540 aa7.01□□□□□ -1.29
CLDND1-208ENST00000503004 MBD5Q9P267 1494 aa7□□□□□ -1.29
CLDND1-208ENST00000503004 DCAF11Q8TEB1 546 aa7□□□□□ -1.29
CLDND1-208ENST00000503004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.99□□□□□ -1.29
CLDND1-208ENST00000503004 CARD11Q9BXL7 1154 aa6.99□□□□□ -1.29
CLDND1-208ENST00000503004 SHANK2Q9UPX8 1470 aa6.98□□□□□ -1.29
CLDND1-208ENST00000503004 RGL3Q3MIN7 710 aa6.98□□□□□ -1.29
CLDND1-208ENST00000503004 ERCC6L2Q5T890 1561 aa6.98□□□□□ -1.29
CLDND1-208ENST00000503004 ST20-MTHFSA0A0A6YYL1 179 aa6.98□□□□□ -1.29
CLDND1-208ENST00000503004 BCORL1Q5H9F3 1711 aa6.98□□□□□ -1.29
CLDND1-208ENST00000503004 SAMD9LQ8IVG5 1584 aa6.97□□□□□ -1.29
CLDND1-208ENST00000503004 DHX29Q7Z478 1369 aaKnown RBP6.97□□□□□ -1.29
CLDND1-208ENST00000503004 CCDC141Q6ZP82 1450 aa6.97□□□□□ -1.29
CLDND1-208ENST00000503004 CHD1O14646 1710 aa6.97□□□□□ -1.29
CLDND1-208ENST00000503004 CDC42BPBQ9Y5S2 1711 aa6.97□□□□□ -1.29
CLDND1-208ENST00000503004 A0A0U1RQG5 324 aaPredicted RBP6.96□□□□□ -1.29
CLDND1-208ENST00000503004 SYCP2Q9BX26 1530 aa6.96□□□□□ -1.29
CLDND1-208ENST00000503004 ARHGAP5Q13017 1502 aa6.96□□□□□ -1.3
CLDND1-208ENST00000503004 TTC37Q6PGP7 1564 aa6.96□□□□□ -1.3
CLDND1-208ENST00000503004 PAK3O75914 559 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-208ENST00000503004 PDE4CQ08493 712 aa6.95□□□□□ -1.3
CLDND1-208ENST00000503004 KDM5CP41229 1560 aa6.95□□□□□ -1.3
CLDND1-208ENST00000503004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLDND1-208ENST00000503004 FAM135AQ9P2D6 1515 aa6.95□□□□□ -1.3
CLDND1-208ENST00000503004 NBPF1Q3BBV0 1214 aa6.95□□□□□ -1.3
CLDND1-208ENST00000503004 UHRF1BP1Q6BDS2 1440 aa6.95□□□□□ -1.3
CLDND1-208ENST00000503004 ARHGEF5Q12774 1597 aa6.95□□□□□ -1.3
CLDND1-208ENST00000503004 ZBED9Q6R2W3 1325 aa6.94□□□□□ -1.3
CLDND1-208ENST00000503004 RALGAPBQ86X10 1494 aa6.94□□□□□ -1.3
CLDND1-208ENST00000503004 PREX2Q70Z35 1606 aa6.94□□□□□ -1.3
CLDND1-208ENST00000503004 ROCK2O75116 1388 aaKnown RBP6.94□□□□□ -1.3
CLDND1-208ENST00000503004 CCDC144AA2RUR9 1427 aa6.94□□□□□ -1.3
CLDND1-208ENST00000503004 FGD1P98174 961 aa6.94□□□□□ -1.3
CLDND1-208ENST00000503004 RSPH4AQ5TD94 716 aa6.94□□□□□ -1.3
CLDND1-208ENST00000503004 KDM5DQ9BY66 1539 aa6.94□□□□□ -1.3
CLDND1-208ENST00000503004 POLR1AO95602 1720 aaPredicted RBP6.94□□□□□ -1.3
CLDND1-208ENST00000503004 PLEKHH2Q8IVE3 1493 aa6.93□□□□□ -1.3
CLDND1-208ENST00000503004 NOP58Q9Y2X3 529 aaKnown RBP6.93□□□□□ -1.3
CLDND1-208ENST00000503004 AAMPQ13685 434 aa6.93□□□□□ -1.3
CLDND1-208ENST00000503004 ARHGEF12Q9NZN5 1544 aa6.92□□□□□ -1.3
CLDND1-208ENST00000503004 PLA2R1Q13018 1463 aa6.92□□□□□ -1.3
CLDND1-208ENST00000503004 RBM10P98175 930 aaKnown RBP6.92□□□□□ -1.3
CLDND1-208ENST00000503004 TMC1Q8TDI8 760 aa6.92□□□□□ -1.3
CLDND1-208ENST00000503004 ABCC2Q92887 1545 aa6.92□□□□□ -1.3
CLDND1-208ENST00000503004 PDIA4P13667 645 aaKnown RBP6.91□□□□□ -1.3
CLDND1-208ENST00000503004 B4GALNT3Q6L9W6 998 aa6.91□□□□□ -1.3
CLDND1-208ENST00000503004 ARID4BQ4LE39 1312 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-208ENST00000503004 SHROOM2Q13796 1616 aa6.91□□□□□ -1.3
CLDND1-208ENST00000503004 PRAG1Q86YV5 1406 aa6.91□□□□□ -1.3
CLDND1-208ENST00000503004 GLIPR1L2Q4G1C9 344 aa6.91□□□□□ -1.3
CLDND1-208ENST00000503004 RTL5Q5HYW3 569 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-208ENST00000503004 AFAP1Q8N556 730 aa6.91□□□□□ -1.3
CLDND1-208ENST00000503004 PNISRQ8TF01 805 aaKnown RBP6.91□□□□□ -1.3
CLDND1-208ENST00000503004 BCL11BQ9C0K0 894 aaPredicted RBP6.91□□□□□ -1.3
CLDND1-208ENST00000503004 DNAJC5Q9H3Z4 198 aa6.9□□□□□ -1.3
CLDND1-208ENST00000503004 EFCAB2Q5VUJ9 269 aa6.9□□□□□ -1.31
CLDND1-208ENST00000503004 TRAPPC8Q9Y2L5 1435 aa6.89□□□□□ -1.31
CLDND1-208ENST00000503004 BRPF3Q9ULD4 1205 aa6.89□□□□□ -1.31
CLDND1-208ENST00000503004 A2MP01023 1474 aa6.89□□□□□ -1.31
CLDND1-208ENST00000503004 MYO5CQ9NQX4 1742 aa6.89□□□□□ -1.31
CLDND1-208ENST00000503004 PLCH2O75038 1416 aa6.89□□□□□ -1.31
CLDND1-208ENST00000503004 PPP4R2Q9NY27 417 aa6.88□□□□□ -1.31
CLDND1-208ENST00000503004 RSPH6AQ9H0K4 717 aa6.88□□□□□ -1.31
CLDND1-208ENST00000503004 CC2D1BQ5T0F9 858 aaKnown RBP6.87□□□□□ -1.31
CLDND1-208ENST00000503004 TESK2Q96S53 571 aa6.87□□□□□ -1.31
CLDND1-208ENST00000503004 UNC13BO14795 1591 aa6.87□□□□□ -1.31
CLDND1-208ENST00000503004 DISP3Q9P2K9 1392 aa6.87□□□□□ -1.31
CLDND1-208ENST00000503004 MYBBP1AQ9BQG0 1328 aaKnown RBP6.87□□□□□ -1.31
CLDND1-208ENST00000503004 WASHC2CQ9Y4E1 1318 aa6.87□□□□□ -1.31
CLDND1-208ENST00000503004 ZCCHC11Q5TAX3 1644 aaKnown RBP6.87□□□□□ -1.31
CLDND1-208ENST00000503004 NUDCQ9Y266 331 aa6.87□□□□□ -1.31
CLDND1-208ENST00000503004 MAST1Q9Y2H9 1570 aa6.87□□□□□ -1.31
CLDND1-208ENST00000503004 SPAG9O60271 1321 aaKnown RBP6.87□□□□□ -1.31
CLDND1-208ENST00000503004 PER1O15534 1290 aaPredicted RBP6.86□□□□□ -1.31
CLDND1-208ENST00000503004 TRPM1Q7Z4N2 1603 aa6.86□□□□□ -1.31
CLDND1-208ENST00000503004 DUOX2Q9NRD8 1548 aa6.86□□□□□ -1.31
CLDND1-208ENST00000503004 PLXNC1O60486 1568 aa6.86□□□□□ -1.31
CLDND1-208ENST00000503004 SMG6Q86US8 1419 aaKnown RBP6.86□□□□□ -1.31
CLDND1-208ENST00000503004 IQGAP3Q86VI3 1631 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms