RNA–Protein interactions for RNA: ENST00000502908.2

SCARB2-203, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-203ENST00000502908 MYBBP1AQ9BQG0 1328 aaKnown RBP25.04■■□□□ 1.6
SCARB2-203ENST00000502908 NBPF1Q3BBV0 1214 aa25■■□□□ 1.59
SCARB2-203ENST00000502908 ARHGEF12Q9NZN5 1544 aa25■■□□□ 1.59
SCARB2-203ENST00000502908 LRPPRCP42704 1394 aaKnown RBP25■■□□□ 1.59
SCARB2-203ENST00000502908 SHANK2Q9UPX8 1470 aa24.99■■□□□ 1.59
SCARB2-203ENST00000502908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.99■■□□□ 1.59
SCARB2-203ENST00000502908 ABCA8O94911 1581 aa24.98■■□□□ 1.59
SCARB2-203ENST00000502908 EXOC6Q8TAG9 804 aa24.98■■□□□ 1.59
SCARB2-203ENST00000502908 BRD4O60885 1362 aaPredicted RBP24.97■■□□□ 1.59
SCARB2-203ENST00000502908 NUP160Q12769 1436 aa24.96■■□□□ 1.59
SCARB2-203ENST00000502908 RALBP1Q15311 655 aa24.96■■□□□ 1.59
SCARB2-203ENST00000502908 RRP1P56182 461 aaKnown RBP24.95■■□□□ 1.58
SCARB2-203ENST00000502908 KDM5DQ9BY66 1539 aa24.94■■□□□ 1.58
SCARB2-203ENST00000502908 CC2D1BQ5T0F9 858 aaKnown RBP24.94■■□□□ 1.58
SCARB2-203ENST00000502908 CDCA7LQ96GN5 454 aa24.93■■□□□ 1.58
SCARB2-203ENST00000502908 FAM135AQ9P2D6 1515 aa24.93■■□□□ 1.58
SCARB2-203ENST00000502908 E9PCH4 1651 aa24.92■■□□□ 1.58
SCARB2-203ENST00000502908 PTPRGP23470 1445 aa24.92■■□□□ 1.58
SCARB2-203ENST00000502908 DEKP35659 375 aaKnown RBP24.91■■□□□ 1.58
SCARB2-203ENST00000502908 ANP32AP39687 249 aaKnown RBP24.91■■□□□ 1.58
SCARB2-203ENST00000502908 RCAN3Q9UKA8 241 aa24.91■■□□□ 1.58
SCARB2-203ENST00000502908 CCDC144AA2RUR9 1427 aa24.9■■□□□ 1.58
SCARB2-203ENST00000502908 KTN1Q86UP2 1357 aaKnown RBP24.89■■□□□ 1.58
SCARB2-203ENST00000502908 NLRP13Q86W25 1043 aa24.89■■□□□ 1.58
SCARB2-203ENST00000502908 NPM2Q86SE8 214 aaKnown RBP24.89■■□□□ 1.57
SCARB2-203ENST00000502908 PRAG1Q86YV5 1406 aa24.88■■□□□ 1.57
SCARB2-203ENST00000502908 SAMD9LQ8IVG5 1584 aa24.88■■□□□ 1.57
SCARB2-203ENST00000502908 IPO9Q96P70 1041 aaKnown RBP24.87■■□□□ 1.57
SCARB2-203ENST00000502908 TRPM1Q7Z4N2 1603 aa24.86■■□□□ 1.57
SCARB2-203ENST00000502908 PLIN1O60240 522 aa24.86■■□□□ 1.57
SCARB2-203ENST00000502908 CCDC141Q6ZP82 1450 aa24.85■■□□□ 1.57
SCARB2-203ENST00000502908 PARD3Q8TEW0 1356 aa24.85■■□□□ 1.57
SCARB2-203ENST00000502908 PER1O15534 1290 aaPredicted RBP24.85■■□□□ 1.57
SCARB2-203ENST00000502908 CDC42BPBQ9Y5S2 1711 aa24.85■■□□□ 1.57
SCARB2-203ENST00000502908 DISP3Q9P2K9 1392 aa24.85■■□□□ 1.57
SCARB2-203ENST00000502908 ARHGEF5Q12774 1597 aa24.84■■□□□ 1.57
SCARB2-203ENST00000502908 SKAP1Q86WV1 359 aa24.82■■□□□ 1.56
SCARB2-203ENST00000502908 PLA2R1Q13018 1463 aa24.82■■□□□ 1.56
SCARB2-203ENST00000502908 PANK3Q9H999 370 aa24.81■■□□□ 1.56
SCARB2-203ENST00000502908 ZBTB47Q9UFB7 747 aaPredicted RBP24.81■■□□□ 1.56
SCARB2-203ENST00000502908 SYCP2Q9BX26 1530 aa24.81■■□□□ 1.56
SCARB2-203ENST00000502908 A2MP01023 1474 aa24.81■■□□□ 1.56
SCARB2-203ENST00000502908 TESK2Q96S53 571 aa24.79■■□□□ 1.56
SCARB2-203ENST00000502908 PREX2Q70Z35 1606 aa24.76■■□□□ 1.55
SCARB2-203ENST00000502908 ARHGAP5Q13017 1502 aa24.75■■□□□ 1.55
SCARB2-203ENST00000502908 PLEKHH2Q8IVE3 1493 aa24.74■■□□□ 1.55
SCARB2-203ENST00000502908 COL17A1Q9UMD9 1497 aaPredicted RBP24.74■■□□□ 1.55
SCARB2-203ENST00000502908 TTC37Q6PGP7 1564 aa24.72■■□□□ 1.55
SCARB2-203ENST00000502908 MYO5CQ9NQX4 1742 aa24.72■■□□□ 1.55
SCARB2-203ENST00000502908 MYT1LQ9UL68 1186 aa24.72■■□□□ 1.55
SCARB2-203ENST00000502908 PDE4AP27815 886 aa24.71■■□□□ 1.55
SCARB2-203ENST00000502908 PDE3BQ13370 1112 aa24.71■■□□□ 1.55
SCARB2-203ENST00000502908 ERBINQ96RT1 1412 aa24.71■■□□□ 1.55
SCARB2-203ENST00000502908 GPRASP1Q5JY77 1395 aa24.7■■□□□ 1.54
SCARB2-203ENST00000502908 CRBNQ96SW2 442 aa24.69■■□□□ 1.54
SCARB2-203ENST00000502908 PRDM15P57071 1507 aaPredicted RBP24.69■■□□□ 1.54
SCARB2-203ENST00000502908 TCERG1O14776 1098 aaKnown RBP24.67■■□□□ 1.54
SCARB2-203ENST00000502908 TMF1P82094 1093 aa24.67■■□□□ 1.54
SCARB2-203ENST00000502908 RSPH4AQ5TD94 716 aa24.67■■□□□ 1.54
SCARB2-203ENST00000502908 UNC13BO14795 1591 aa24.66■■□□□ 1.54
SCARB2-203ENST00000502908 C20orf194Q5TEA3 1177 aa24.66■■□□□ 1.54
SCARB2-203ENST00000502908 ADAMTS8Q9UP79 889 aa24.66■■□□□ 1.54
SCARB2-203ENST00000502908 LAS1LQ9Y4W2 734 aaKnown RBP24.65■■□□□ 1.54
SCARB2-203ENST00000502908 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.65■■□□□ 1.546e-6■■■■■ 38.2
SCARB2-203ENST00000502908 RTL5Q5HYW3 569 aaPredicted RBP24.64■■□□□ 1.53
SCARB2-203ENST00000502908 BLMP54132 1417 aaPredicted RBP24.63■■□□□ 1.53
SCARB2-203ENST00000502908 BACH2Q9BYV9 841 aa24.63■■□□□ 1.53
SCARB2-203ENST00000502908 IQGAP3Q86VI3 1631 aa24.6■■□□□ 1.53
SCARB2-203ENST00000502908 WASHC2CQ9Y4E1 1318 aa24.58■■□□□ 1.53
SCARB2-203ENST00000502908 MAGI2Q86UL8 1455 aa24.57■■□□□ 1.52
SCARB2-203ENST00000502908 MAST1Q9Y2H9 1570 aa24.56■■□□□ 1.52
SCARB2-203ENST00000502908 LAMC1P11047 1609 aa24.56■■□□□ 1.52
SCARB2-203ENST00000502908 ERCC6L2Q5T890 1561 aa24.55■■□□□ 1.52
SCARB2-203ENST00000502908 PLEKHH1Q9ULM0 1364 aa24.55■■□□□ 1.52
SCARB2-203ENST00000502908 KNSTRNQ9Y448 316 aa24.55■■□□□ 1.52
SCARB2-203ENST00000502908 EIF2AK4Q9P2K8 1649 aaKnown RBP24.55■■□□□ 1.52
SCARB2-203ENST00000502908 PPP2R1AP30153 589 aa24.54■■□□□ 1.52
SCARB2-203ENST00000502908 ZMYM4Q5VZL5 1548 aa24.54■■□□□ 1.52
SCARB2-203ENST00000502908 WDR43Q15061 677 aaKnown RBP eCLIP24.52■■□□□ 1.52
SCARB2-203ENST00000502908 PLXNC1O60486 1568 aa24.52■■□□□ 1.52
SCARB2-203ENST00000502908 WDR7Q9Y4E6 1490 aa24.52■■□□□ 1.52
SCARB2-203ENST00000502908 MS4A1P11836 297 aa24.51■■□□□ 1.51
SCARB2-203ENST00000502908 CCDC146Q8IYE0 955 aa24.51■■□□□ 1.51
SCARB2-203ENST00000502908 DUOX2Q9NRD8 1548 aa24.51■■□□□ 1.51
SCARB2-203ENST00000502908 CHD1O14646 1710 aa24.5■■□□□ 1.51
SCARB2-203ENST00000502908 NEFMP07197 916 aa24.49■■□□□ 1.51
SCARB2-203ENST00000502908 AMER1Q5JTC6 1135 aaPredicted RBP24.48■■□□□ 1.51
SCARB2-203ENST00000502908 DUSP27Q5VZP5 1158 aa24.48■■□□□ 1.51
SCARB2-203ENST00000502908 RNF17Q9BXT8 1623 aaKnown RBP24.48■■□□□ 1.51
SCARB2-203ENST00000502908 TRAPPC8Q9Y2L5 1435 aa24.47■■□□□ 1.51
SCARB2-203ENST00000502908 ATP10AO60312 1499 aa24.45■■□□□ 1.5
SCARB2-203ENST00000502908 SLC4A3P48751 1232 aa24.45■■□□□ 1.5
SCARB2-203ENST00000502908 AFAP1Q8N556 730 aa24.45■■□□□ 1.5
SCARB2-203ENST00000502908 MADDQ8WXG6 1647 aa24.43■■□□□ 1.5
SCARB2-203ENST00000502908 INSRP06213 1382 aa24.42■■□□□ 1.5
SCARB2-203ENST00000502908 GOLGA2Q08379 1002 aa24.42■■□□□ 1.5
SCARB2-203ENST00000502908 EFCAB2Q5VUJ9 269 aa24.42■■□□□ 1.5
SCARB2-203ENST00000502908 ABCC2Q92887 1545 aa24.41■■□□□ 1.5
SCARB2-203ENST00000502908 SPINK5Q9NQ38 1064 aaPredicted RBP24.41■■□□□ 1.5
SCARB2-203ENST00000502908 KDM2BQ8NHM5 1336 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms