RNA–Protein interactions for RNA: ENST00000502669.5

SH3TC1-206, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 1 (best)

Gene SH3TC1, Length 3,484 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-206ENST00000502669 NPM2Q86SE8 214 aaKnown RBP20.04■□□□□ 0.8
SH3TC1-206ENST00000502669 TMF1P82094 1093 aa20.04■□□□□ 0.8
SH3TC1-206ENST00000502669 NLRP13Q86W25 1043 aa20.03■□□□□ 0.8
SH3TC1-206ENST00000502669 ABCC10Q5T3U5 1492 aa20.02■□□□□ 0.8
SH3TC1-206ENST00000502669 AFAP1Q8N556 730 aa20.01■□□□□ 0.79
SH3TC1-206ENST00000502669 ADGBQ8N7X0 1667 aa20.01■□□□□ 0.79
SH3TC1-206ENST00000502669 RALGAPBQ86X10 1494 aa19.99■□□□□ 0.79
SH3TC1-206ENST00000502669 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
SH3TC1-206ENST00000502669 RCAN3Q9UKA8 241 aa19.98■□□□□ 0.79
SH3TC1-206ENST00000502669 KNSTRNQ9Y448 316 aa19.98■□□□□ 0.79
SH3TC1-206ENST00000502669 PLEKHH2Q8IVE3 1493 aa19.98■□□□□ 0.79
SH3TC1-206ENST00000502669 ABCA8O94911 1581 aa19.98■□□□□ 0.79
SH3TC1-206ENST00000502669 SPAG9O60271 1321 aaKnown RBP19.98■□□□□ 0.79
SH3TC1-206ENST00000502669 BCORL1Q5H9F3 1711 aa19.97■□□□□ 0.79
SH3TC1-206ENST00000502669 SMG6Q86US8 1419 aaKnown RBP19.97■□□□□ 0.79
SH3TC1-206ENST00000502669 CDCA7LQ96GN5 454 aa19.97■□□□□ 0.79
SH3TC1-206ENST00000502669 SYCP2Q9BX26 1530 aa19.97■□□□□ 0.79
SH3TC1-206ENST00000502669 NBR1Q14596 966 aa19.96■□□□□ 0.79
SH3TC1-206ENST00000502669 CDC42BPAQ5VT25 1732 aa19.96■□□□□ 0.79
SH3TC1-206ENST00000502669 MBD5Q9P267 1494 aa19.96■□□□□ 0.79
SH3TC1-206ENST00000502669 WDR43Q15061 677 aaKnown RBP eCLIP19.96■□□□□ 0.79
SH3TC1-206ENST00000502669 ANP32AP39687 249 aaKnown RBP19.96■□□□□ 0.79
SH3TC1-206ENST00000502669 EXOC6Q8TAG9 804 aa19.95■□□□□ 0.78
SH3TC1-206ENST00000502669 PLIN1O60240 522 aa19.95■□□□□ 0.78
SH3TC1-206ENST00000502669 SHANK2Q9UPX8 1470 aa19.95■□□□□ 0.78
SH3TC1-206ENST00000502669 FAM135AQ9P2D6 1515 aa19.95■□□□□ 0.78
SH3TC1-206ENST00000502669 KIF3BO15066 747 aa19.94■□□□□ 0.78
SH3TC1-206ENST00000502669 BRD4O60885 1362 aaPredicted RBP19.94■□□□□ 0.78
SH3TC1-206ENST00000502669 FANCIQ9NVI1 1328 aa19.93■□□□□ 0.78
SH3TC1-206ENST00000502669 UHRF1BP1Q6BDS2 1440 aa19.92■□□□□ 0.78
SH3TC1-206ENST00000502669 KDM5CP41229 1560 aa19.91■□□□□ 0.78
SH3TC1-206ENST00000502669 RRP1P56182 461 aaKnown RBP19.9■□□□□ 0.78
SH3TC1-206ENST00000502669 ADCY10Q96PN6 1610 aa19.9■□□□□ 0.78
SH3TC1-206ENST00000502669 DISP3Q9P2K9 1392 aa19.9■□□□□ 0.78
SH3TC1-206ENST00000502669 PRAG1Q86YV5 1406 aa19.88■□□□□ 0.77
SH3TC1-206ENST00000502669 CROCC2H7BZ55 1655 aa19.88■□□□□ 0.77
SH3TC1-206ENST00000502669 SAMD9LQ8IVG5 1584 aa19.87■□□□□ 0.77
SH3TC1-206ENST00000502669 ARHGEF12Q9NZN5 1544 aa19.86■□□□□ 0.77
SH3TC1-206ENST00000502669 TESK2Q96S53 571 aa19.84■□□□□ 0.77
SH3TC1-206ENST00000502669 TNNT2P45379 298 aaPredicted RBP19.84■□□□□ 0.77
SH3TC1-206ENST00000502669 NOP58Q9Y2X3 529 aaKnown RBP19.84■□□□□ 0.77
SH3TC1-206ENST00000502669 ERBINQ96RT1 1412 aa19.83■□□□□ 0.77
SH3TC1-206ENST00000502669 CCDC146Q8IYE0 955 aa19.83■□□□□ 0.77
SH3TC1-206ENST00000502669 ADAMTS8Q9UP79 889 aa19.83■□□□□ 0.76
SH3TC1-206ENST00000502669 ZBTB47Q9UFB7 747 aaPredicted RBP19.82■□□□□ 0.76
SH3TC1-206ENST00000502669 PER1O15534 1290 aaPredicted RBP19.82■□□□□ 0.76
SH3TC1-206ENST00000502669 A2MP01023 1474 aa19.81■□□□□ 0.76
SH3TC1-206ENST00000502669 CDCA8Q53HL2 280 aa19.81■□□□□ 0.76
SH3TC1-206ENST00000502669 ANO8Q9HCE9 1232 aaPredicted RBP19.8■□□□□ 0.76
SH3TC1-206ENST00000502669 ERCC6L2Q5T890 1561 aa19.8■□□□□ 0.76
SH3TC1-206ENST00000502669 TRAPPC8Q9Y2L5 1435 aa19.8■□□□□ 0.76
SH3TC1-206ENST00000502669 GGT6Q6P531 493 aa19.79■□□□□ 0.76
SH3TC1-206ENST00000502669 KANK1Q14678 1352 aa19.79■□□□□ 0.76
SH3TC1-206ENST00000502669 TTC37Q6PGP7 1564 aa19.79■□□□□ 0.76
SH3TC1-206ENST00000502669 NPM1P06748 294 aaKnown RBP eCLIP19.79■□□□□ 0.76
SH3TC1-206ENST00000502669 PDE3BQ13370 1112 aa19.79■□□□□ 0.76
SH3TC1-206ENST00000502669 ARHGEF5Q12774 1597 aa19.79■□□□□ 0.76
SH3TC1-206ENST00000502669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.78■□□□□ 0.76
SH3TC1-206ENST00000502669 PLA2R1Q13018 1463 aa19.78■□□□□ 0.76
SH3TC1-206ENST00000502669 CFAP70Q5T0N1 1121 aa19.78■□□□□ 0.76
SH3TC1-206ENST00000502669 NEUROD2Q15784 382 aa19.77■□□□□ 0.75
SH3TC1-206ENST00000502669 CRBNQ96SW2 442 aa19.77■□□□□ 0.75
SH3TC1-206ENST00000502669 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
SH3TC1-206ENST00000502669 SKAP1Q86WV1 359 aa19.76■□□□□ 0.75
SH3TC1-206ENST00000502669 PAK3O75914 559 aaPredicted RBP19.76■□□□□ 0.75
SH3TC1-206ENST00000502669 LRPPRCP42704 1394 aaKnown RBP19.76■□□□□ 0.75
SH3TC1-206ENST00000502669 PARD3Q8TEW0 1356 aa19.76■□□□□ 0.75
SH3TC1-206ENST00000502669 CDC42BPBQ9Y5S2 1711 aa19.75■□□□□ 0.75
SH3TC1-206ENST00000502669 NUTM2DQ5VT03 806 aaPredicted RBP19.75■□□□□ 0.75
SH3TC1-206ENST00000502669 SCAPERQ9BY12 1400 aa19.74■□□□□ 0.75
SH3TC1-206ENST00000502669 PPP2R1AP30153 589 aa19.74■□□□□ 0.75
SH3TC1-206ENST00000502669 PREX2Q70Z35 1606 aa19.73■□□□□ 0.75
SH3TC1-206ENST00000502669 KDM5DQ9BY66 1539 aa19.73■□□□□ 0.75
SH3TC1-206ENST00000502669 PLCH2O75038 1416 aa19.73■□□□□ 0.75
SH3TC1-206ENST00000502669 POLR1AO95602 1720 aaPredicted RBP19.72■□□□□ 0.75
SH3TC1-206ENST00000502669 CANXP27824 592 aaKnown RBP19.72■□□□□ 0.75
SH3TC1-206ENST00000502669 CHD1O14646 1710 aa19.72■□□□□ 0.75
SH3TC1-206ENST00000502669 TRAK1Q9UPV9 953 aa19.71■□□□□ 0.75
SH3TC1-206ENST00000502669 ABCC2Q92887 1545 aa19.71■□□□□ 0.75
SH3TC1-206ENST00000502669 RNF123Q5XPI4 1314 aa19.71■□□□□ 0.75
SH3TC1-206ENST00000502669 DUOX2Q9NRD8 1548 aa19.69■□□□□ 0.74
SH3TC1-206ENST00000502669 WASHC2CQ9Y4E1 1318 aa19.69■□□□□ 0.74
SH3TC1-206ENST00000502669 SAFB2Q14151 953 aaKnown RBP eCLIP19.69■□□□□ 0.74
SH3TC1-206ENST00000502669 APAF1O14727 1248 aa19.68■□□□□ 0.74
SH3TC1-206ENST00000502669 IPO9Q96P70 1041 aaKnown RBP19.68■□□□□ 0.74
SH3TC1-206ENST00000502669 GOLGA2Q08379 1002 aa19.68■□□□□ 0.74
SH3TC1-206ENST00000502669 COL17A1Q9UMD9 1497 aaPredicted RBP19.68■□□□□ 0.74
SH3TC1-206ENST00000502669 DAXXQ9UER7 740 aaPredicted RBP19.68■□□□□ 0.74
SH3TC1-206ENST00000502669 C20orf194Q5TEA3 1177 aa19.67■□□□□ 0.74
SH3TC1-206ENST00000502669 RTN4Q9NQC3 1192 aaKnown RBP19.67■□□□□ 0.74
SH3TC1-206ENST00000502669 LAS1LQ9Y4W2 734 aaKnown RBP19.67■□□□□ 0.74
SH3TC1-206ENST00000502669 PDE4AP27815 886 aa19.66■□□□□ 0.74
SH3TC1-206ENST00000502669 RGS3P49796 1198 aa19.66■□□□□ 0.74
SH3TC1-206ENST00000502669 GPRASP1Q5JY77 1395 aa19.66■□□□□ 0.74
SH3TC1-206ENST00000502669 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.66■□□□□ 0.74
SH3TC1-206ENST00000502669 TCERG1O14776 1098 aaKnown RBP19.66■□□□□ 0.74
SH3TC1-206ENST00000502669 EIF3AQ14152 1382 aaKnown RBP19.64■□□□□ 0.74
SH3TC1-206ENST00000502669 TMEM132EQ6IEE7 984 aa19.64■□□□□ 0.74
SH3TC1-206ENST00000502669 ADGRF5Q8IZF2 1346 aa19.64■□□□□ 0.73
SH3TC1-206ENST00000502669 MYO5CQ9NQX4 1742 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms