RNA–Protein interactions for RNA: ENST00000498271.1

C4A-259, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best) BASIC

Gene C4A, Length 5,269 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-259ENST00000498271 PTPRGP23470 1445 aa18.9■□□□□ 0.62
C4A-259ENST00000498271 MYBBP1AQ9BQG0 1328 aaKnown RBP18.9■□□□□ 0.62
C4A-259ENST00000498271 ZNF644Q9H582 1327 aaPredicted RBP18.9■□□□□ 0.62
C4A-259ENST00000498271 IPO8O15397 1037 aaKnown RBP18.89■□□□□ 0.62
C4A-259ENST00000498271 AQRO60306 1485 aaKnown RBP eCLIP18.89■□□□□ 0.618e-7■■■■■ 26.8
C4A-259ENST00000498271 MLECQ14165 292 aa18.88■□□□□ 0.61
C4A-259ENST00000498271 CALD1Q05682 793 aaKnown RBP18.87■□□□□ 0.61
C4A-259ENST00000498271 ZBED9Q6R2W3 1325 aa18.86■□□□□ 0.61
C4A-259ENST00000498271 SKOR2Q2VWA4 1001 aaPredicted RBP18.86■□□□□ 0.61
C4A-259ENST00000498271 KCNJ4P48050 445 aa18.84■□□□□ 0.61
C4A-259ENST00000498271 FGD1P98174 961 aa18.84■□□□□ 0.61
C4A-259ENST00000498271 PDE4AP27815 886 aa18.84■□□□□ 0.61
C4A-259ENST00000498271 HTATSF1O43719 755 aaKnown RBP18.84■□□□□ 0.61
C4A-259ENST00000498271 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
C4A-259ENST00000498271 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
C4A-259ENST00000498271 EFCAB5A4FU69 1503 aa18.84■□□□□ 0.61
C4A-259ENST00000498271 GOLGA2Q08379 1002 aa18.83■□□□□ 0.61
C4A-259ENST00000498271 PANK3Q9H999 370 aa18.83■□□□□ 0.61
C4A-259ENST00000498271 HDGFL2Q7Z4V5 671 aaPredicted RBP18.83■□□□□ 0.6
C4A-259ENST00000498271 PHF14O94880 888 aa18.82■□□□□ 0.6
C4A-259ENST00000498271 EID1Q9Y6B2 187 aa18.82■□□□□ 0.6
C4A-259ENST00000498271 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
C4A-259ENST00000498271 FAM161AQ3B820 660 aa18.81■□□□□ 0.6
C4A-259ENST00000498271 CCDC7Q96M83 1385 aa18.81■□□□□ 0.6
C4A-259ENST00000498271 NESP48681 1621 aa18.81■□□□□ 0.6
C4A-259ENST00000498271 CENPQQ7L2Z9 268 aaPredicted RBP18.81■□□□□ 0.6
C4A-259ENST00000498271 CSPP1Q1MSJ5 1256 aa18.81■□□□□ 0.6
C4A-259ENST00000498271 CCDC146Q8IYE0 955 aa18.8■□□□□ 0.6
C4A-259ENST00000498271 AMER1Q5JTC6 1135 aaPredicted RBP18.8■□□□□ 0.6
C4A-259ENST00000498271 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
C4A-259ENST00000498271 KIF7Q2M1P5 1343 aa18.79■□□□□ 0.6
C4A-259ENST00000498271 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
C4A-259ENST00000498271 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
C4A-259ENST00000498271 POLA1P09884 1462 aaPredicted RBP18.78■□□□□ 0.6
C4A-259ENST00000498271 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
C4A-259ENST00000498271 OS9Q13438 667 aaPredicted RBP18.77■□□□□ 0.6
C4A-259ENST00000498271 WASHC2CQ9Y4E1 1318 aa18.77■□□□□ 0.59
C4A-259ENST00000498271 CNTLNQ9NXG0 1405 aa18.77■□□□□ 0.59
C4A-259ENST00000498271 SOX12O15370 315 aa18.76■□□□□ 0.59
C4A-259ENST00000498271 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
C4A-259ENST00000498271 DCAF8L1A6NGE4 600 aa18.75■□□□□ 0.59
C4A-259ENST00000498271 ARID3AQ99856 593 aa18.75■□□□□ 0.59
C4A-259ENST00000498271 ANKRD50Q9ULJ7 1429 aa18.75■□□□□ 0.59
C4A-259ENST00000498271 MFAP1P55081 439 aaKnown RBP18.74■□□□□ 0.59
C4A-259ENST00000498271 NUTM2DQ5VT03 806 aaPredicted RBP18.74■□□□□ 0.59
C4A-259ENST00000498271 TPM4P67936 248 aa18.74■□□□□ 0.59
C4A-259ENST00000498271 TRAK1Q9UPV9 953 aa18.73■□□□□ 0.59
C4A-259ENST00000498271 EHBP1L1Q8N3D4 1523 aa18.73■□□□□ 0.59
C4A-259ENST00000498271 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
C4A-259ENST00000498271 KIAA1211Q6ZU35 1233 aa18.72■□□□□ 0.59
C4A-259ENST00000498271 GOLGA6L1Q8N7Z2 621 aa18.72■□□□□ 0.59
C4A-259ENST00000498271 TMX4Q9H1E5 349 aaPredicted RBP18.71■□□□□ 0.59
C4A-259ENST00000498271 HFM1A2PYH4 1435 aa18.71■□□□□ 0.59
C4A-259ENST00000498271 TERF2IPQ9NYB0 399 aa18.7■□□□□ 0.58
C4A-259ENST00000498271 RRP1P56182 461 aaKnown RBP18.7■□□□□ 0.58
C4A-259ENST00000498271 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.7■□□□□ 0.58
C4A-259ENST00000498271 ITPRIPQ8IWB1 547 aa18.7■□□□□ 0.58
C4A-259ENST00000498271 CENPJQ9HC77 1338 aaPredicted RBP18.7■□□□□ 0.58
C4A-259ENST00000498271 MAP7D2Q96T17 732 aa18.69■□□□□ 0.58
C4A-259ENST00000498271 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
C4A-259ENST00000498271 MTERF4Q7Z6M4 381 aaKnown RBP18.68■□□□□ 0.58
C4A-259ENST00000498271 ST18O60284 1047 aa18.67■□□□□ 0.58
C4A-259ENST00000498271 CYB5RLQ6IPT4 315 aa18.67■□□□□ 0.58
C4A-259ENST00000498271 EXOC6Q8TAG9 804 aa18.67■□□□□ 0.58
C4A-259ENST00000498271 MIA2Q96PC5 1412 aa18.66■□□□□ 0.58
C4A-259ENST00000498271 PLIN1O60240 522 aa18.66■□□□□ 0.58
C4A-259ENST00000498271 SMC4Q9NTJ3 1288 aa18.66■□□□□ 0.58
C4A-259ENST00000498271 RTF1Q92541 710 aaKnown RBP18.65■□□□□ 0.58
C4A-259ENST00000498271 CLUAP1Q96AJ1 413 aa18.65■□□□□ 0.58
C4A-259ENST00000498271 CHMP4AQ9BY43 222 aa18.65■□□□□ 0.58
C4A-259ENST00000498271 NAP1L2Q9ULW6 460 aaPredicted RBP18.65■□□□□ 0.58
C4A-259ENST00000498271 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.57
C4A-259ENST00000498271 DDX49Q9Y6V7 483 aaKnown RBP18.64■□□□□ 0.57
C4A-259ENST00000498271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.64■□□□□ 0.57
C4A-259ENST00000498271 MRC2Q9UBG0 1479 aa18.63■□□□□ 0.57
C4A-259ENST00000498271 RRP7AQ9Y3A4 280 aaKnown RBP18.63■□□□□ 0.57
C4A-259ENST00000498271 FAM43AQ8N2R8 423 aa18.62■□□□□ 0.57
C4A-259ENST00000498271 HECW1Q76N89 1606 aa18.62■□□□□ 0.57
C4A-259ENST00000498271 CHMP5Q9NZZ3 219 aa18.61■□□□□ 0.57
C4A-259ENST00000498271 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
C4A-259ENST00000498271 ABCA10Q8WWZ4 1543 aa18.61■□□□□ 0.57
C4A-259ENST00000498271 CCDC9Q9Y3X0 531 aaKnown RBP18.6■□□□□ 0.57
C4A-259ENST00000498271 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
C4A-259ENST00000498271 PCF11O94913 1555 aaKnown RBP18.6■□□□□ 0.57
C4A-259ENST00000498271 CRBNQ96SW2 442 aa18.6■□□□□ 0.57
C4A-259ENST00000498271 HMMRO75330 724 aa18.59■□□□□ 0.57
C4A-259ENST00000498271 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
C4A-259ENST00000498271 E9PSI1 815 aa18.59■□□□□ 0.57
C4A-259ENST00000498271 CCDC34Q96HJ3 373 aa18.59■□□□□ 0.57
C4A-259ENST00000498271 SUPT6HQ7KZ85 1726 aaKnown RBP18.59■□□□□ 0.57
C4A-259ENST00000498271 SETQ01105 290 aaPredicted RBP18.59■□□□□ 0.57
C4A-259ENST00000498271 KIF16BQ96L93 1317 aa18.59■□□□□ 0.57
C4A-259ENST00000498271 VGFO15240 615 aaPredicted RBP18.58■□□□□ 0.57
C4A-259ENST00000498271 NBPF8Q3BBV2 869 aa18.58■□□□□ 0.57
C4A-259ENST00000498271 TPM2P07951 284 aa18.58■□□□□ 0.56
C4A-259ENST00000498271 APAF1O14727 1248 aa18.58■□□□□ 0.56
C4A-259ENST00000498271 ZNF771Q7L3S4 317 aaPredicted RBP18.58■□□□□ 0.56
C4A-259ENST00000498271 APBB1O00213 710 aa18.57■□□□□ 0.56
C4A-259ENST00000498271 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
C4A-259ENST00000498271 ATP6V1DQ9Y5K8 247 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms