RNA–Protein interactions for RNA: ENST00000498033.5

CLDN12-214, Transcript of claudin 12, humanhuman

TSL 3

Gene CLDN12, Length 420 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-214ENST00000498033 CNTLNQ9NXG0 1405 aa8.71□□□□□ -1.02
CLDN12-214ENST00000498033 SHANK2Q9UPX8 1470 aa8.7□□□□□ -1.02
CLDN12-214ENST00000498033 SETD1BQ9UPS6 1966 aaKnown RBP8.7□□□□□ -1.02
CLDN12-214ENST00000498033 CD44P16070 742 aaKnown RBP8.7□□□□□ -1.02
CLDN12-214ENST00000498033 AFAP1Q8N556 730 aa8.7□□□□□ -1.02
CLDN12-214ENST00000498033 CREBZFQ9NS37 354 aa8.7□□□□□ -1.02
CLDN12-214ENST00000498033 NPATQ14207 1427 aa8.7□□□□□ -1.02
CLDN12-214ENST00000498033 NUP153P49790 1475 aaKnown RBP8.7□□□□□ -1.02
CLDN12-214ENST00000498033 RAPGEF6Q8TEU7 1601 aa8.69□□□□□ -1.02
CLDN12-214ENST00000498033 ZNF518AQ6AHZ1 1483 aa8.69□□□□□ -1.02
CLDN12-214ENST00000498033 CTTNBP2Q8WZ74 1663 aa8.69□□□□□ -1.02
CLDN12-214ENST00000498033 TRIM52Q96A61 297 aa8.68□□□□□ -1.02
CLDN12-214ENST00000498033 ALKQ9UM73 1620 aa8.68□□□□□ -1.02
CLDN12-214ENST00000498033 PLCH2O75038 1416 aa8.67□□□□□ -1.02
CLDN12-214ENST00000498033 RANGAP1P46060 587 aaPredicted RBP8.67□□□□□ -1.02
CLDN12-214ENST00000498033 EFCAB2Q5VUJ9 269 aa8.67□□□□□ -1.02
CLDN12-214ENST00000498033 DIP2CQ9Y2E4 1556 aa8.67□□□□□ -1.02
CLDN12-214ENST00000498033 CEP170BQ9Y4F5 1589 aaPredicted RBP8.67□□□□□ -1.02
CLDN12-214ENST00000498033 ZMYM3Q14202 1370 aa8.66□□□□□ -1.02
CLDN12-214ENST00000498033 MYO3AQ8NEV4 1616 aa8.65□□□□□ -1.02
CLDN12-214ENST00000498033 AGLP35573 1532 aa8.65□□□□□ -1.02
CLDN12-214ENST00000498033 CLCN6P51797 869 aa8.65□□□□□ -1.02
CLDN12-214ENST00000498033 ABCA6Q8N139 1617 aa8.63□□□□□ -1.03
CLDN12-214ENST00000498033 PROM2Q8N271 834 aa8.63□□□□□ -1.03
CLDN12-214ENST00000498033 REREQ9P2R6 1566 aa8.62□□□□□ -1.03
CLDN12-214ENST00000498033 ZNF142P52746 1687 aaPredicted RBP8.62□□□□□ -1.03
CLDN12-214ENST00000498033 KDM5CP41229 1560 aa8.61□□□□□ -1.03
CLDN12-214ENST00000498033 RNF17Q9BXT8 1623 aaKnown RBP8.61□□□□□ -1.03
CLDN12-214ENST00000498033 VWDEQ8N2E2 1590 aa8.61□□□□□ -1.03
CLDN12-214ENST00000498033 ARHGAP5Q13017 1502 aa8.6□□□□□ -1.03
CLDN12-214ENST00000498033 A2ML1A8K2U0 1454 aa8.6□□□□□ -1.03
CLDN12-214ENST00000498033 SUPT6HQ7KZ85 1726 aaKnown RBP8.6□□□□□ -1.03
CLDN12-214ENST00000498033 LRRC7Q96NW7 1537 aa8.59□□□□□ -1.03
CLDN12-214ENST00000498033 MEX3CQ5U5Q3 659 aaKnown RBP8.59□□□□□ -1.03
CLDN12-214ENST00000498033 ANKLE2Q86XL3 938 aa8.59□□□□□ -1.03
CLDN12-214ENST00000498033 ZNF579Q8NAF0 562 aaKnown RBP8.59□□□□□ -1.03
CLDN12-214ENST00000498033 NEURL4Q96JN8 1562 aa8.59□□□□□ -1.03
CLDN12-214ENST00000498033 MLH3Q9UHC1 1453 aa8.58□□□□□ -1.04
CLDN12-214ENST00000498033 NPHP4O75161 1426 aaPredicted RBP8.58□□□□□ -1.04
CLDN12-214ENST00000498033 ATP1B4Q9UN42 357 aaPredicted RBP8.58□□□□□ -1.04
CLDN12-214ENST00000498033 CDK13Q14004 1512 aaKnown RBP8.58□□□□□ -1.04
CLDN12-214ENST00000498033 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.58□□□□□ -1.04
CLDN12-214ENST00000498033 GGT6Q6P531 493 aa8.57□□□□□ -1.04
CLDN12-214ENST00000498033 ZRANB1Q9UGI0 708 aa8.57□□□□□ -1.04
CLDN12-214ENST00000498033 SAMD9Q5K651 1589 aa8.56□□□□□ -1.04
CLDN12-214ENST00000498033 MROH2AA6NES4 1674 aa8.56□□□□□ -1.04
CLDN12-214ENST00000498033 DNMT1P26358 1616 aaKnown RBP8.56□□□□□ -1.04
CLDN12-214ENST00000498033 MNX1P50219 401 aaPredicted RBP8.55□□□□□ -1.04
CLDN12-214ENST00000498033 ZNF772Q68DY9 489 aaPredicted RBP8.55□□□□□ -1.04
CLDN12-214ENST00000498033 CLTCQ00610 1675 aaKnown RBP8.54□□□□□ -1.04
CLDN12-214ENST00000498033 PRXQ9BXM0 1461 aa8.54□□□□□ -1.04
CLDN12-214ENST00000498033 TNRQ92752 1358 aa8.54□□□□□ -1.04
CLDN12-214ENST00000498033 RXRBP28702 533 aa8.54□□□□□ -1.04
CLDN12-214ENST00000498033 SYNMO15061 1565 aa8.53□□□□□ -1.04
CLDN12-214ENST00000498033 PAK3O75914 559 aaPredicted RBP8.53□□□□□ -1.04
CLDN12-214ENST00000498033 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
CLDN12-214ENST00000498033 POLR1AO95602 1720 aaPredicted RBP8.53□□□□□ -1.04
CLDN12-214ENST00000498033 MYO5CQ9NQX4 1742 aa8.53□□□□□ -1.04
CLDN12-214ENST00000498033 ABCC1P33527 1531 aa8.53□□□□□ -1.04
CLDN12-214ENST00000498033 FAM135BQ49AJ0 1406 aa8.53□□□□□ -1.04
CLDN12-214ENST00000498033 NUTM2BA6NNL0 878 aaPredicted RBP8.52□□□□□ -1.05
CLDN12-214ENST00000498033 NUTM2EB1AL46 878 aaPredicted RBP8.52□□□□□ -1.05
CLDN12-214ENST00000498033 NUTM2DQ5VT03 806 aaPredicted RBP8.52□□□□□ -1.05
CLDN12-214ENST00000498033 FBXO31Q5XUX0 539 aaPredicted RBP8.52□□□□□ -1.05
CLDN12-214ENST00000498033 NUTM2AQ8IVF1 878 aaPredicted RBP8.52□□□□□ -1.05
CLDN12-214ENST00000498033 THEMISQ8N1K5 641 aaPredicted RBP8.52□□□□□ -1.05
CLDN12-214ENST00000498033 JCADQ9P266 1359 aa8.51□□□□□ -1.05
CLDN12-214ENST00000498033 POTEIP0CG38 1075 aa8.51□□□□□ -1.05
CLDN12-214ENST00000498033 CDK11AQ9UQ88 783 aaPredicted RBP8.5□□□□□ -1.05
CLDN12-214ENST00000498033 SETBP1Q9Y6X0 1596 aa8.5□□□□□ -1.05
CLDN12-214ENST00000498033 KIF14Q15058 1648 aa8.5□□□□□ -1.05
CLDN12-214ENST00000498033 SPAG9O60271 1321 aaKnown RBP8.5□□□□□ -1.05
CLDN12-214ENST00000498033 FAM135AQ9P2D6 1515 aa8.49□□□□□ -1.05
CLDN12-214ENST00000498033 ZNF777Q9ULD5 760 aaPredicted RBP8.49□□□□□ -1.05
CLDN12-214ENST00000498033 MED14O60244 1454 aa8.49□□□□□ -1.05
CLDN12-214ENST00000498033 LRP6O75581 1613 aa8.48□□□□□ -1.05
CLDN12-214ENST00000498033 LHX8Q68G74 356 aa8.48□□□□□ -1.05
CLDN12-214ENST00000498033 DCBLD2Q96PD2 775 aa8.48□□□□□ -1.05
CLDN12-214ENST00000498033 IQGAP1P46940 1657 aa8.48□□□□□ -1.05
CLDN12-214ENST00000498033 KIDINS220Q9ULH0 1771 aa8.48□□□□□ -1.05
CLDN12-214ENST00000498033 CLIP1P30622 1438 aa8.47□□□□□ -1.05
CLDN12-214ENST00000498033 ITSN2Q9NZM3 1697 aa8.47□□□□□ -1.05
CLDN12-214ENST00000498033 STRCP1A6NGW2 1772 aa8.47□□□□□ -1.05
CLDN12-214ENST00000498033 UGGT1Q9NYU2 1555 aa8.47□□□□□ -1.05
CLDN12-214ENST00000498033 ROBO1Q9Y6N7 1651 aa8.46□□□□□ -1.05
CLDN12-214ENST00000498033 A2MP01023 1474 aa8.46□□□□□ -1.05
CLDN12-214ENST00000498033 TMEM94Q12767 1356 aa8.46□□□□□ -1.06
CLDN12-214ENST00000498033 RGS12O14924 1447 aa8.46□□□□□ -1.06
CLDN12-214ENST00000498033 TROQ12816 1431 aaPredicted RBP8.46□□□□□ -1.06
CLDN12-214ENST00000498033 CDK12Q9NYV4 1490 aaPredicted RBP8.45□□□□□ -1.06
CLDN12-214ENST00000498033 DEPDC5O75140 1603 aa8.45□□□□□ -1.06
CLDN12-214ENST00000498033 IFFO2Q5TF58 517 aa8.45□□□□□ -1.06
CLDN12-214ENST00000498033 PHF12Q96QT6 1004 aa8.45□□□□□ -1.06
CLDN12-214ENST00000498033 SPATA31A6Q5VVP1 1343 aa8.45□□□□□ -1.06
CLDN12-214ENST00000498033 SAMD9LQ8IVG5 1584 aa8.44□□□□□ -1.06
CLDN12-214ENST00000498033 GALR2O43603 387 aaPredicted RBP8.44□□□□□ -1.06
CLDN12-214ENST00000498033 HNRNPMP52272 730 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLDN12-214ENST00000498033 AFF2P51816 1311 aa8.43□□□□□ -1.06
CLDN12-214ENST00000498033 ATAD2Q6PL18 1390 aa8.43□□□□□ -1.06
CLDN12-214ENST00000498033 MIA2Q96PC5 1412 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms