RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CANXP27824 592 aaKnown RBP16.78■□□□□ 0.28
GAPVD1-220ENST00000497580 MYH16Q9H6N6 1097 aa16.78■□□□□ 0.28
GAPVD1-220ENST00000497580 UPF2Q9HAU5 1272 aaKnown RBP16.77■□□□□ 0.28
GAPVD1-220ENST00000497580 BCORL1Q5H9F3 1711 aa16.77■□□□□ 0.28
GAPVD1-220ENST00000497580 HECW1Q76N89 1606 aa16.77■□□□□ 0.27
GAPVD1-220ENST00000497580 ADAMTS8Q9UP79 889 aa16.75■□□□□ 0.27
GAPVD1-220ENST00000497580 WDR43Q15061 677 aaKnown RBP eCLIP16.74■□□□□ 0.27
GAPVD1-220ENST00000497580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.274e-9■□□□□ 10.4
GAPVD1-220ENST00000497580 ESPNB1AK53 854 aa16.74■□□□□ 0.27
GAPVD1-220ENST00000497580 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
GAPVD1-220ENST00000497580 CFDP1Q9UEE9 299 aaPredicted RBP16.74■□□□□ 0.27
GAPVD1-220ENST00000497580 IGHDP01880 384 aa16.73■□□□□ 0.27
GAPVD1-220ENST00000497580 RBM10P98175 930 aaKnown RBP16.72■□□□□ 0.27
GAPVD1-220ENST00000497580 SNAPC4Q5SXM2 1469 aa16.72■□□□□ 0.27
GAPVD1-220ENST00000497580 USP19O94966 1318 aa16.72■□□□□ 0.27
GAPVD1-220ENST00000497580 TRAK2O60296 914 aa16.72■□□□□ 0.27
GAPVD1-220ENST00000497580 BCAR3O75815 825 aa16.72■□□□□ 0.27
GAPVD1-220ENST00000497580 CCDC146Q8IYE0 955 aa16.72■□□□□ 0.27
GAPVD1-220ENST00000497580 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
GAPVD1-220ENST00000497580 MCM4P33991 863 aa16.71■□□□□ 0.27
GAPVD1-220ENST00000497580 TBC1D2Q9BYX2 928 aa16.71■□□□□ 0.27
GAPVD1-220ENST00000497580 SUPT6HQ7KZ85 1726 aaKnown RBP16.71■□□□□ 0.26
GAPVD1-220ENST00000497580 EFCAB5A4FU69 1503 aa16.7■□□□□ 0.26
GAPVD1-220ENST00000497580 ERBB4Q15303 1308 aa16.7■□□□□ 0.26
GAPVD1-220ENST00000497580 GOLGA2Q08379 1002 aa16.7■□□□□ 0.26
GAPVD1-220ENST00000497580 DUSP27Q5VZP5 1158 aa16.69■□□□□ 0.26
GAPVD1-220ENST00000497580 PANK3Q9H999 370 aa16.68■□□□□ 0.26
GAPVD1-220ENST00000497580 COG6Q9Y2V7 657 aa16.68■□□□□ 0.26
GAPVD1-220ENST00000497580 WDR62O43379 1518 aa16.68■□□□□ 0.26
GAPVD1-220ENST00000497580 MRE11P49959 708 aa16.68■□□□□ 0.26
GAPVD1-220ENST00000497580 GRPEL1Q9HAV7 217 aa16.68■□□□□ 0.26
GAPVD1-220ENST00000497580 EHBP1L1Q8N3D4 1523 aa16.66■□□□□ 0.26
GAPVD1-220ENST00000497580 PANK1Q8TE04 598 aa16.66■□□□□ 0.26
GAPVD1-220ENST00000497580 KIAA1211Q6ZU35 1233 aa16.66■□□□□ 0.26
GAPVD1-220ENST00000497580 ANTXR1Q9H6X2 564 aa16.66■□□□□ 0.26
GAPVD1-220ENST00000497580 FSD2A1L4K1 749 aa16.65■□□□□ 0.26
GAPVD1-220ENST00000497580 CDK13Q14004 1512 aaKnown RBP16.65■□□□□ 0.26
GAPVD1-220ENST00000497580 UGGT2Q9NYU1 1516 aa16.64■□□□□ 0.25
GAPVD1-220ENST00000497580 FAM13BQ9NYF5 915 aa16.64■□□□□ 0.25
GAPVD1-220ENST00000497580 MFAP1P55081 439 aaKnown RBP16.64■□□□□ 0.25
GAPVD1-220ENST00000497580 PLEKHH1Q9ULM0 1364 aa16.64■□□□□ 0.25
GAPVD1-220ENST00000497580 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
GAPVD1-220ENST00000497580 PARD3Q8TEW0 1356 aa16.63■□□□□ 0.25
GAPVD1-220ENST00000497580 MAGI3Q5TCQ9 1506 aa16.63■□□□□ 0.25
GAPVD1-220ENST00000497580 GCC2Q8IWJ2 1684 aa16.63■□□□□ 0.25
GAPVD1-220ENST00000497580 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
GAPVD1-220ENST00000497580 POLR1AO95602 1720 aaPredicted RBP16.61■□□□□ 0.25
GAPVD1-220ENST00000497580 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
GAPVD1-220ENST00000497580 PDCL3Q9H2J4 239 aa16.6■□□□□ 0.25
GAPVD1-220ENST00000497580 FOXD4L1Q9NU39 408 aa16.6■□□□□ 0.25
GAPVD1-220ENST00000497580 MAPK8IP3Q9UPT6 1336 aa16.6■□□□□ 0.25
GAPVD1-220ENST00000497580 DAPK1P53355 1430 aa16.6■□□□□ 0.25
GAPVD1-220ENST00000497580 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
GAPVD1-220ENST00000497580 CHMP5Q9NZZ3 219 aa16.6■□□□□ 0.25
GAPVD1-220ENST00000497580 GRIN2BQ13224 1484 aa16.6■□□□□ 0.25
GAPVD1-220ENST00000497580 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
GAPVD1-220ENST00000497580 TPM2P07951 284 aa16.59■□□□□ 0.25
GAPVD1-220ENST00000497580 GAPVD1Q14C86 1478 aa16.59■□□□□ 0.25
GAPVD1-220ENST00000497580 URB2Q14146 1524 aaKnown RBP16.59■□□□□ 0.25
GAPVD1-220ENST00000497580 APAF1O14727 1248 aa16.59■□□□□ 0.25
GAPVD1-220ENST00000497580 NEUROD2Q15784 382 aa16.59■□□□□ 0.25
GAPVD1-220ENST00000497580 ZBTB7CA1YPR0 619 aa16.58■□□□□ 0.25
GAPVD1-220ENST00000497580 PER1O15534 1290 aaPredicted RBP16.58■□□□□ 0.25
GAPVD1-220ENST00000497580 KDM5CP41229 1560 aa16.58■□□□□ 0.24
GAPVD1-220ENST00000497580 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
GAPVD1-220ENST00000497580 TBC1D32Q96NH3 1257 aa16.57■□□□□ 0.24
GAPVD1-220ENST00000497580 BCL2L13Q9BXK5 485 aa16.57■□□□□ 0.24
GAPVD1-220ENST00000497580 TCOF1Q13428 1488 aaKnown RBP16.57■□□□□ 0.24
GAPVD1-220ENST00000497580 KIAA1107Q9UPP5 1409 aa16.57■□□□□ 0.24
GAPVD1-220ENST00000497580 NUP155O75694 1391 aa16.57■□□□□ 0.24
GAPVD1-220ENST00000497580 ABCC5O15440 1437 aa16.57■□□□□ 0.24
GAPVD1-220ENST00000497580 MRC2Q9UBG0 1479 aa16.56■□□□□ 0.24
GAPVD1-220ENST00000497580 R3HCC1Q9Y3T6 440 aaKnown RBP16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 SLFN5Q08AF3 891 aa16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 GAS2L3Q86XJ1 694 aa16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 HSCBQ8IWL3 235 aa16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 SENP3Q9H4L4 574 aaPredicted RBP16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 PRDM10Q9NQV6 1147 aa16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 TSPY4P0CV99 314 aa16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 TSPY10P0CW01 314 aa16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 MSNP26038 577 aaKnown RBP16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 ANP32BQ92688 251 aaKnown RBP16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 KNSTRNQ9Y448 316 aa16.55■□□□□ 0.24
GAPVD1-220ENST00000497580 PDZRN3Q9UPQ7 1066 aa16.54■□□□□ 0.24
GAPVD1-220ENST00000497580 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
GAPVD1-220ENST00000497580 PZPP20742 1482 aa16.54■□□□□ 0.24
GAPVD1-220ENST00000497580 HNRNPMP52272 730 aaKnown RBP eCLIP16.54■□□□□ 0.246e-13■■■■■ 43.1
GAPVD1-220ENST00000497580 DDX11L8A8MPP1 907 aa16.53■□□□□ 0.24
GAPVD1-220ENST00000497580 LRRIQ1Q96JM4 1722 aa16.53■□□□□ 0.24
GAPVD1-220ENST00000497580 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
GAPVD1-220ENST00000497580 C22orf23Q9BZE7 217 aa16.53■□□□□ 0.24
GAPVD1-220ENST00000497580 MBD5Q9P267 1494 aa16.52■□□□□ 0.23
GAPVD1-220ENST00000497580 ZHX1Q9UKY1 873 aaPredicted RBP16.52■□□□□ 0.23
GAPVD1-220ENST00000497580 CGNL1Q0VF96 1302 aa16.51■□□□□ 0.23
GAPVD1-220ENST00000497580 RALGAPBQ86X10 1494 aa16.51■□□□□ 0.23
GAPVD1-220ENST00000497580 TARBP1Q13395 1621 aaKnown RBP16.51■□□□□ 0.23
GAPVD1-220ENST00000497580 PPP2R1AP30153 589 aa16.51■□□□□ 0.23
GAPVD1-220ENST00000497580 TNNQ9UQP3 1299 aa16.51■□□□□ 0.23
GAPVD1-220ENST00000497580 ZMYM4Q5VZL5 1548 aa16.51■□□□□ 0.23
GAPVD1-220ENST00000497580 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms