RNA–Protein interactions for RNA: ENST00000497056.6

PDCD10-218, Transcript of programmed cell death 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD10, Length 1,276 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-218ENST00000497056 DNMT1P26358 1616 aaKnown RBP13.49□□□□□ -0.25
PDCD10-218ENST00000497056 TSPY4P0CV99 314 aa13.48□□□□□ -0.25
PDCD10-218ENST00000497056 TSPY10P0CW01 314 aa13.48□□□□□ -0.25
PDCD10-218ENST00000497056 FAM50AQ14320 339 aaKnown RBP13.48□□□□□ -0.25
PDCD10-218ENST00000497056 DHX29Q7Z478 1369 aaKnown RBP13.47□□□□□ -0.25
PDCD10-218ENST00000497056 FER1L4A9Z1Z3 1794 aa13.47□□□□□ -0.25
PDCD10-218ENST00000497056 SHANK2Q9UPX8 1470 aa13.46□□□□□ -0.25
PDCD10-218ENST00000497056 CHIC2Q9UKJ5 165 aa13.45□□□□□ -0.26
PDCD10-218ENST00000497056 PTPRKQ15262 1439 aa13.45□□□□□ -0.26
PDCD10-218ENST00000497056 KCNA4P22459 653 aa13.43□□□□□ -0.26
PDCD10-218ENST00000497056 CEBPAP49715 358 aaPredicted RBP13.42□□□□□ -0.26
PDCD10-218ENST00000497056 GGT6Q6P531 493 aa13.42□□□□□ -0.26
PDCD10-218ENST00000497056 RRP7BPQ9NSQ0 103 aa13.42□□□□□ -0.26
PDCD10-218ENST00000497056 KIF15Q9NS87 1388 aa13.42□□□□□ -0.26
PDCD10-218ENST00000497056 KIF3BO15066 747 aa13.41□□□□□ -0.26
PDCD10-218ENST00000497056 RRBP1Q9P2E9 1410 aaKnown RBP13.4□□□□□ -0.26
PDCD10-218ENST00000497056 ADGRL2O95490 1459 aa13.4□□□□□ -0.26
PDCD10-218ENST00000497056 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
PDCD10-218ENST00000497056 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
PDCD10-218ENST00000497056 CLTCQ00610 1675 aaKnown RBP13.38□□□□□ -0.27
PDCD10-218ENST00000497056 ITGAEP38570 1179 aa13.38□□□□□ -0.27
PDCD10-218ENST00000497056 MROH1Q8NDA8 1641 aa13.38□□□□□ -0.27
PDCD10-218ENST00000497056 C3P01024 1663 aa13.37□□□□□ -0.27
PDCD10-218ENST00000497056 ANKRD30AQ9BXX3 1397 aa13.37□□□□□ -0.27
PDCD10-218ENST00000497056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.37□□□□□ -0.27
PDCD10-218ENST00000497056 RNF17Q9BXT8 1623 aaKnown RBP13.36□□□□□ -0.27
PDCD10-218ENST00000497056 EIF2AK4Q9P2K8 1649 aaKnown RBP13.36□□□□□ -0.27
PDCD10-218ENST00000497056 CNTLNQ9NXG0 1405 aa13.36□□□□□ -0.27
PDCD10-218ENST00000497056 ERBINQ96RT1 1412 aa13.35□□□□□ -0.27
PDCD10-218ENST00000497056 MROH2AA6NES4 1674 aa13.34□□□□□ -0.27
PDCD10-218ENST00000497056 ZMYM3Q14202 1370 aa13.34□□□□□ -0.27
PDCD10-218ENST00000497056 ESF1Q9H501 851 aaKnown RBP13.34□□□□□ -0.27
PDCD10-218ENST00000497056 KDM5DQ9BY66 1539 aa13.34□□□□□ -0.27
PDCD10-218ENST00000497056 U3KPZ7 1027 aaPredicted RBP13.33□□□□□ -0.28
PDCD10-218ENST00000497056 LMTK3Q96Q04 1460 aa13.33□□□□□ -0.28
PDCD10-218ENST00000497056 ABCC3O15438 1527 aa13.32□□□□□ -0.28
PDCD10-218ENST00000497056 ROCK1Q13464 1354 aa13.32□□□□□ -0.28
PDCD10-218ENST00000497056 PRDM15P57071 1507 aaPredicted RBP13.31□□□□□ -0.28
PDCD10-218ENST00000497056 DEPDC5O75140 1603 aa13.31□□□□□ -0.28
PDCD10-218ENST00000497056 ANKRD50Q9ULJ7 1429 aa13.3□□□□□ -0.28
PDCD10-218ENST00000497056 WASHC2CQ9Y4E1 1318 aa13.3□□□□□ -0.28
PDCD10-218ENST00000497056 CEP152O94986 1710 aa13.3□□□□□ -0.28
PDCD10-218ENST00000497056 FAM135AQ9P2D6 1515 aa13.29□□□□□ -0.28
PDCD10-218ENST00000497056 HSPA2P54652 639 aa13.28□□□□□ -0.28
PDCD10-218ENST00000497056 FBXO31Q5XUX0 539 aaPredicted RBP13.28□□□□□ -0.28
PDCD10-218ENST00000497056 PREX1Q8TCU6 1659 aa13.28□□□□□ -0.28
PDCD10-218ENST00000497056 NPATQ14207 1427 aa13.27□□□□□ -0.29
PDCD10-218ENST00000497056 PZPP20742 1482 aa13.27□□□□□ -0.29
PDCD10-218ENST00000497056 VWDEQ8N2E2 1590 aa13.27□□□□□ -0.29
PDCD10-218ENST00000497056 ZC3H13Q5T200 1668 aaKnown RBP13.27□□□□□ -0.29
PDCD10-218ENST00000497056 CAMSAP1Q5T5Y3 1602 aa13.26□□□□□ -0.29
PDCD10-218ENST00000497056 UHRF1BP1Q6BDS2 1440 aa13.25□□□□□ -0.29
PDCD10-218ENST00000497056 MYO3AQ8NEV4 1616 aa13.24□□□□□ -0.29
PDCD10-218ENST00000497056 NAIPQ13075 1403 aa13.24□□□□□ -0.29
PDCD10-218ENST00000497056 UNC13BO14795 1591 aa13.24□□□□□ -0.29
PDCD10-218ENST00000497056 LMTK2Q8IWU2 1503 aa13.23□□□□□ -0.29
PDCD10-218ENST00000497056 TNRQ92752 1358 aa13.22□□□□□ -0.29
PDCD10-218ENST00000497056 ERVK-7P63135 1459 aa13.22□□□□□ -0.29
PDCD10-218ENST00000497056 GCC2Q8IWJ2 1684 aa13.21□□□□□ -0.29
PDCD10-218ENST00000497056 KANK1Q14678 1352 aa13.21□□□□□ -0.29
PDCD10-218ENST00000497056 SPATA31D1Q6ZQQ2 1576 aa13.21□□□□□ -0.29
PDCD10-218ENST00000497056 ARHGAP31Q2M1Z3 1444 aa13.21□□□□□ -0.3
PDCD10-218ENST00000497056 EFCAB6Q5THR3 1501 aa13.2□□□□□ -0.3
PDCD10-218ENST00000497056 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
PDCD10-218ENST00000497056 HFM1A2PYH4 1435 aa13.2□□□□□ -0.3
PDCD10-218ENST00000497056 SETD1BQ9UPS6 1966 aaKnown RBP13.2□□□□□ -0.3
PDCD10-218ENST00000497056 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
PDCD10-218ENST00000497056 ZNF142P52746 1687 aaPredicted RBP13.19□□□□□ -0.3
PDCD10-218ENST00000497056 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
PDCD10-218ENST00000497056 IQGAP3Q86VI3 1631 aa13.17□□□□□ -0.3
PDCD10-218ENST00000497056 A2ML1A8K2U0 1454 aa13.17□□□□□ -0.3
PDCD10-218ENST00000497056 NUP155O75694 1391 aa13.17□□□□□ -0.3
PDCD10-218ENST00000497056 TET3O43151 1660 aa13.16□□□□□ -0.3
PDCD10-218ENST00000497056 CFAP65Q6ZU64 1925 aaKnown RBP13.16□□□□□ -0.3
PDCD10-218ENST00000497056 STRCQ7RTU9 1775 aa13.16□□□□□ -0.3
PDCD10-218ENST00000497056 SYNMO15061 1565 aa13.15□□□□□ -0.3
PDCD10-218ENST00000497056 NOS1P29475 1434 aa13.14□□□□□ -0.31
PDCD10-218ENST00000497056 NLRP1Q9C000 1473 aa13.14□□□□□ -0.31
PDCD10-218ENST00000497056 E9PCH4 1651 aa13.14□□□□□ -0.31
PDCD10-218ENST00000497056 DSG3P32926 999 aa13.13□□□□□ -0.31
PDCD10-218ENST00000497056 NCKAP5LQ9HCH0 1330 aa13.13□□□□□ -0.31
PDCD10-218ENST00000497056 UGGT1Q9NYU2 1555 aa13.11□□□□□ -0.31
PDCD10-218ENST00000497056 RPRD2Q5VT52 1461 aaKnown RBP13.1□□□□□ -0.31
PDCD10-218ENST00000497056 PIK3C2BO00750 1634 aa13.1□□□□□ -0.31
PDCD10-218ENST00000497056 TRIM52Q96A61 297 aa13.1□□□□□ -0.31
PDCD10-218ENST00000497056 PLA2R1Q13018 1463 aa13.1□□□□□ -0.31
PDCD10-218ENST00000497056 IDI1Q13907 227 aa13.09□□□□□ -0.31
PDCD10-218ENST00000497056 UBR1Q8IWV7 1749 aa13.09□□□□□ -0.31
PDCD10-218ENST00000497056 SP7Q8TDD2 431 aaPredicted RBP13.09□□□□□ -0.31
PDCD10-218ENST00000497056 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
PDCD10-218ENST00000497056 ILDR1Q86SU0 546 aaPredicted RBP13.08□□□□□ -0.32
PDCD10-218ENST00000497056 NEURL4Q96JN8 1562 aa13.07□□□□□ -0.32
PDCD10-218ENST00000497056 CAPN15O75808 1086 aa13.07□□□□□ -0.32
PDCD10-218ENST00000497056 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
PDCD10-218ENST00000497056 PTPRTO14522 1441 aa13.05□□□□□ -0.32
PDCD10-218ENST00000497056 ADGRB3O60242 1522 aa13.05□□□□□ -0.32
PDCD10-218ENST00000497056 PKD2Q13563 968 aa13.05□□□□□ -0.32
PDCD10-218ENST00000497056 THEMISQ8N1K5 641 aaPredicted RBP13.05□□□□□ -0.32
PDCD10-218ENST00000497056 ARHGAP23Q9P227 1491 aa13.04□□□□□ -0.32
PDCD10-218ENST00000497056 POLR1AO95602 1720 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms