RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	KANK1	Q14678	1352 aa		13.5	□□□□□ -0.25
PCDH15-223	ENST00000495484	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
PCDH15-223	ENST00000495484	KDM5D	Q9BY66	1539 aa		13.49	□□□□□ -0.25
PCDH15-223	ENST00000495484	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.48	□□□□□ -0.25
PCDH15-223	ENST00000495484	DIP2C	Q9Y2E4	1556 aa		13.48	□□□□□ -0.25
PCDH15-223	ENST00000495484	ABCA6	Q8N139	1617 aa		13.47	□□□□□ -0.25
PCDH15-223	ENST00000495484	PZP	P20742	1482 aa		13.47	□□□□□ -0.25
PCDH15-223	ENST00000495484	UNC13B	O14795	1591 aa		13.46	□□□□□ -0.25
PCDH15-223	ENST00000495484	PKD2	Q13563	968 aa		13.46	□□□□□ -0.26
PCDH15-223	ENST00000495484	PPP6R1	Q9UPN7	881 aa		13.45	□□□□□ -0.26
PCDH15-223	ENST00000495484	RERE	Q9P2R6	1566 aa		13.45	□□□□□ -0.26
PCDH15-223	ENST00000495484	GGT6	Q6P531	493 aa		13.44	□□□□□ -0.26
PCDH15-223	ENST00000495484	FAM135A	Q9P2D6	1515 aa		13.43	□□□□□ -0.26
PCDH15-223	ENST00000495484	TIMELESS	Q9UNS1	1208 aa		13.43	□□□□□ -0.26
PCDH15-223	ENST00000495484	AGL	P35573	1532 aa		13.42	□□□□□ -0.26
PCDH15-223	ENST00000495484	ARHGEF40	Q8TER5	1519 aa		13.42	□□□□□ -0.26
PCDH15-223	ENST00000495484	DEPDC5	O75140	1603 aa		13.41	□□□□□ -0.26
PCDH15-223	ENST00000495484	PRDM15	P57071	1507 aa	Predicted RBP	13.41	□□□□□ -0.26
PCDH15-223	ENST00000495484	BCORL1	Q5H9F3	1711 aa		13.41	□□□□□ -0.26
PCDH15-223	ENST00000495484	IQGAP3	Q86VI3	1631 aa		13.41	□□□□□ -0.26
PCDH15-223	ENST00000495484	WASHC2C	Q9Y4E1	1318 aa		13.41	□□□□□ -0.26
PCDH15-223	ENST00000495484	ANKRD30B	Q9BXX2	1392 aa		13.41	□□□□□ -0.26
PCDH15-223	ENST00000495484	RNF17	Q9BXT8	1623 aa	Known RBP	13.4	□□□□□ -0.26
PCDH15-223	ENST00000495484	FOXD1	Q16676	465 aa		13.4	□□□□□ -0.26
PCDH15-223	ENST00000495484	VWDE	Q8N2E2	1590 aa		13.39	□□□□□ -0.27
PCDH15-223	ENST00000495484	LMTK2	Q8IWU2	1503 aa		13.38	□□□□□ -0.27
PCDH15-223	ENST00000495484	NEUROD1	Q13562	356 aa		13.38	□□□□□ -0.27
PCDH15-223	ENST00000495484	SIN3A	Q96ST3	1273 aa		13.38	□□□□□ -0.27
PCDH15-223	ENST00000495484	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.37	□□□□□ -0.27
PCDH15-223	ENST00000495484	MROH1	Q8NDA8	1641 aa		13.37	□□□□□ -0.27
PCDH15-223	ENST00000495484	ESF1	Q9H501	851 aa	Known RBP	13.36	□□□□□ -0.27
PCDH15-223	ENST00000495484	RPRD2	Q5VT52	1461 aa	Known RBP	13.34	□□□□□ -0.27
PCDH15-223	ENST00000495484	TONSL	Q96HA7	1378 aa		13.33	□□□□□ -0.28
PCDH15-223	ENST00000495484	TET3	O43151	1660 aa		13.33	□□□□□ -0.28
PCDH15-223	ENST00000495484	ABCC3	O15438	1527 aa		13.33	□□□□□ -0.28
PCDH15-223	ENST00000495484	ARHGAP31	Q2M1Z3	1444 aa		13.32	□□□□□ -0.28
PCDH15-223	ENST00000495484	MLEC	Q14165	292 aa		13.32	□□□□□ -0.28
PCDH15-223	ENST00000495484	CCDC144A	A2RUR9	1427 aa		13.32	□□□□□ -0.28
PCDH15-223	ENST00000495484	PTPRT	O14522	1441 aa		13.31	□□□□□ -0.28
PCDH15-223	ENST00000495484	EFCAB6	Q5THR3	1501 aa		13.31	□□□□□ -0.28
PCDH15-223	ENST00000495484	POTED	Q86YR6	584 aa		13.31	□□□□□ -0.28
PCDH15-223	ENST00000495484	ZC3H13	Q5T200	1668 aa	Known RBP	13.3	□□□□□ -0.28
PCDH15-223	ENST00000495484	NPAT	Q14207	1427 aa		13.29	□□□□□ -0.28
PCDH15-223	ENST00000495484	PLA2R1	Q13018	1463 aa		13.29	□□□□□ -0.28
PCDH15-223	ENST00000495484	CNTLN	Q9NXG0	1405 aa		13.29	□□□□□ -0.28
PCDH15-223	ENST00000495484		E9PCH4	1651 aa		13.27	□□□□□ -0.29
PCDH15-223	ENST00000495484	PPP1R15A	O75807	674 aa	Predicted RBP	13.26	□□□□□ -0.29
PCDH15-223	ENST00000495484	TRPM2	O94759	1503 aa		13.26	□□□□□ -0.29
PCDH15-223	ENST00000495484	L3MBTL2	Q969R5	705 aa		13.25	□□□□□ -0.29
PCDH15-223	ENST00000495484	SLC52A1	Q9NWF4	448 aa		13.25	□□□□□ -0.29
PCDH15-223	ENST00000495484	ZMYM3	Q14202	1370 aa		13.25	□□□□□ -0.29
PCDH15-223	ENST00000495484	CAMSAP1	Q5T5Y3	1602 aa		13.25	□□□□□ -0.29
PCDH15-223	ENST00000495484	NOS1	P29475	1434 aa		13.25	□□□□□ -0.29
PCDH15-223	ENST00000495484	CEP152	O94986	1710 aa		13.24	□□□□□ -0.29
PCDH15-223	ENST00000495484	SIGLEC1	Q9BZZ2	1709 aa		13.24	□□□□□ -0.29
PCDH15-223	ENST00000495484	STAC3	Q96MF2	364 aa		13.24	□□□□□ -0.29
PCDH15-223	ENST00000495484	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.21	□□□□□ -0.3
PCDH15-223	ENST00000495484	SPHKAP	Q2M3C7	1700 aa		13.2	□□□□□ -0.3
PCDH15-223	ENST00000495484	RGL3	Q3MIN7	710 aa		13.2	□□□□□ -0.3
PCDH15-223	ENST00000495484	ERVK-7	P63135	1459 aa		13.2	□□□□□ -0.3
PCDH15-223	ENST00000495484	CLTC	Q00610	1675 aa	Known RBP	13.19	□□□□□ -0.3
PCDH15-223	ENST00000495484	DCAF11	Q8TEB1	546 aa		13.19	□□□□□ -0.3
PCDH15-223	ENST00000495484	SPATA31E1	Q6ZUB1	1445 aa		13.18	□□□□□ -0.3
PCDH15-223	ENST00000495484	NEURL4	Q96JN8	1562 aa		13.18	□□□□□ -0.3
PCDH15-223	ENST00000495484	IDI1	Q13907	227 aa		13.18	□□□□□ -0.3
PCDH15-223	ENST00000495484	RPGRIP1L	Q68CZ1	1315 aa		13.17	□□□□□ -0.3
PCDH15-223	ENST00000495484	CHGA	P10645	457 aa	Known RBP	13.16	□□□□□ -0.3
PCDH15-223	ENST00000495484	MROH2A	A6NES4	1674 aa		13.16	□□□□□ -0.3
PCDH15-223	ENST00000495484	CLTCL1	P53675	1640 aa		13.16	□□□□□ -0.3
PCDH15-223	ENST00000495484	SPATA31D1	Q6ZQQ2	1576 aa		13.16	□□□□□ -0.3
PCDH15-223	ENST00000495484	TNR	Q92752	1358 aa		13.15	□□□□□ -0.3
PCDH15-223	ENST00000495484	ZNF326	Q5BKZ1	582 aa	Known RBP	13.15	□□□□□ -0.3
PCDH15-223	ENST00000495484	STAG3	Q9UJ98	1225 aa		13.15	□□□□□ -0.3
PCDH15-223	ENST00000495484	SYNM	O15061	1565 aa		13.15	□□□□□ -0.31
PCDH15-223	ENST00000495484	KDM2A	Q9Y2K7	1162 aa		13.14	□□□□□ -0.31
PCDH15-223	ENST00000495484	PREX1	Q8TCU6	1659 aa		13.14	□□□□□ -0.31
PCDH15-223	ENST00000495484	UHRF1BP1	Q6BDS2	1440 aa		13.14	□□□□□ -0.31
PCDH15-223	ENST00000495484	UGGT1	Q9NYU2	1555 aa		13.13	□□□□□ -0.31
PCDH15-223	ENST00000495484	PIK3C2B	O00750	1634 aa		13.13	□□□□□ -0.31
PCDH15-223	ENST00000495484	CEBPA	P49715	358 aa	Predicted RBP	13.12	□□□□□ -0.31
PCDH15-223	ENST00000495484	NBPF8	Q3BBV2	869 aa		13.12	□□□□□ -0.31
PCDH15-223	ENST00000495484	ADGRB3	O60242	1522 aa		13.11	□□□□□ -0.31
PCDH15-223	ENST00000495484	FER1L4	A9Z1Z3	1794 aa		13.11	□□□□□ -0.31
PCDH15-223	ENST00000495484	NLRP1	Q9C000	1473 aa		13.11	□□□□□ -0.31
PCDH15-223	ENST00000495484	VGF	O15240	615 aa	Predicted RBP	13.1	□□□□□ -0.31
PCDH15-223	ENST00000495484	HDGF	P51858	240 aa	Known RBP	13.1	□□□□□ -0.31
PCDH15-223	ENST00000495484	ADAMTSL3	P82987	1691 aa		13.1	□□□□□ -0.31
PCDH15-223	ENST00000495484	CFAP65	Q6ZU64	1925 aa	Known RBP	13.09	□□□□□ -0.31
PCDH15-223	ENST00000495484	KIF1B	O60333	1816 aa		13.09	□□□□□ -0.31
PCDH15-223	ENST00000495484	MADD	Q8WXG6	1647 aa		13.09	□□□□□ -0.31
PCDH15-223	ENST00000495484	PRAG1	Q86YV5	1406 aa		13.09	□□□□□ -0.31
PCDH15-223	ENST00000495484	MYOM2	P54296	1465 aa		13.07	□□□□□ -0.32
PCDH15-223	ENST00000495484	PLPPR3	Q6T4P5	718 aa		13.07	□□□□□ -0.32
PCDH15-223	ENST00000495484	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
PCDH15-223	ENST00000495484	ZFYVE9	O95405	1425 aa		13.06	□□□□□ -0.32
PCDH15-223	ENST00000495484	C3	P01024	1663 aa		13.06	□□□□□ -0.32
PCDH15-223	ENST00000495484	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.06	□□□□□ -0.32
PCDH15-223	ENST00000495484	A2ML1	A8K2U0	1454 aa		13.06	□□□□□ -0.32
PCDH15-223	ENST00000495484	TMEM131L	A2VDJ0	1609 aa		13.05	□□□□□ -0.32
PCDH15-223	ENST00000495484	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms