RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, humanhuman

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-223ENST00000495484 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
PCDH15-223ENST00000495484 CCDC180Q9P1Z9 1646 aa18.65■□□□□ 0.58
PCDH15-223ENST00000495484 ABCC9O60706 1549 aa17.83■□□□□ 0.44
PCDH15-223ENST00000495484 ZCCHC6Q5VYS8 1495 aaKnown RBP17.83■□□□□ 0.44
PCDH15-223ENST00000495484 DCAF8L2P0C7V8 631 aa17.68■□□□□ 0.42
PCDH15-223ENST00000495484 DCAF1Q9Y4B6 1507 aa17.66■□□□□ 0.42
PCDH15-223ENST00000495484 MYO15BQ96JP2 1530 aa17.56■□□□□ 0.4
PCDH15-223ENST00000495484 NACADO15069 1562 aa17.48■□□□□ 0.39
PCDH15-223ENST00000495484 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
PCDH15-223ENST00000495484 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
PCDH15-223ENST00000495484 SCRIBQ14160 1630 aa17.06■□□□□ 0.32
PCDH15-223ENST00000495484 UNC13AQ9UPW8 1703 aa16.83■□□□□ 0.28
PCDH15-223ENST00000495484 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
PCDH15-223ENST00000495484 BICRAQ9NZM4 1560 aa16.77■□□□□ 0.27
PCDH15-223ENST00000495484 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
PCDH15-223ENST00000495484 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
PCDH15-223ENST00000495484 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
PCDH15-223ENST00000495484 RSF1Q96T23 1441 aaPredicted RBP16.43■□□□□ 0.22
PCDH15-223ENST00000495484 MROH2BQ7Z745 1585 aa16.4■□□□□ 0.22
PCDH15-223ENST00000495484 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
PCDH15-223ENST00000495484 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
PCDH15-223ENST00000495484 PEG3Q9GZU2 1588 aa16.23■□□□□ 0.19
PCDH15-223ENST00000495484 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
PCDH15-223ENST00000495484 ATAD2BQ9ULI0 1458 aa16.22■□□□□ 0.19
PCDH15-223ENST00000495484 WIZO95785 1651 aa16.2■□□□□ 0.18
PCDH15-223ENST00000495484 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
PCDH15-223ENST00000495484 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
PCDH15-223ENST00000495484 TOP2AP11388 1531 aaKnown RBP16.11■□□□□ 0.17
PCDH15-223ENST00000495484 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
PCDH15-223ENST00000495484 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
PCDH15-223ENST00000495484 CCDC88BA6NC98 1476 aa15.94■□□□□ 0.14
PCDH15-223ENST00000495484 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
PCDH15-223ENST00000495484 CADPSQ9ULU8 1353 aa15.73■□□□□ 0.11
PCDH15-223ENST00000495484 CFTRP13569 1480 aa15.71■□□□□ 0.11
PCDH15-223ENST00000495484 CHIC1Q5VXU3 224 aa15.63■□□□□ 0.09
PCDH15-223ENST00000495484 LAMC3Q9Y6N6 1575 aa15.61■□□□□ 0.09
PCDH15-223ENST00000495484 PDS5BQ9NTI5 1447 aa15.56■□□□□ 0.08
PCDH15-223ENST00000495484 NESP48681 1621 aa15.55■□□□□ 0.08
PCDH15-223ENST00000495484 TRIM41Q8WV44 630 aa15.54■□□□□ 0.08
PCDH15-223ENST00000495484 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.07
PCDH15-223ENST00000495484 WRNQ14191 1432 aaPredicted RBP eCLIP15.5■□□□□ 0.07
PCDH15-223ENST00000495484 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
PCDH15-223ENST00000495484 ABCC8Q09428 1581 aa15.45■□□□□ 0.06
PCDH15-223ENST00000495484 CEP164Q9UPV0 1460 aa15.45■□□□□ 0.06
PCDH15-223ENST00000495484 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
PCDH15-223ENST00000495484 CUX1P39880 1505 aa15.35■□□□□ 0.05
PCDH15-223ENST00000495484 TOP2BQ02880 1626 aa15.35■□□□□ 0.05
PCDH15-223ENST00000495484 SYNJ1O43426 1573 aa15.34■□□□□ 0.05
PCDH15-223ENST00000495484 MRC2Q9UBG0 1479 aa15.32■□□□□ 0.04
PCDH15-223ENST00000495484 DNMBPQ6XZF7 1577 aa15.31■□□□□ 0.04
PCDH15-223ENST00000495484 BIVM-ERCC5R4GMW8 1640 aa15.31■□□□□ 0.04
PCDH15-223ENST00000495484 KIF21AQ7Z4S6 1674 aa15.31■□□□□ 0.04
PCDH15-223ENST00000495484 TOPBP1Q92547 1522 aa15.3■□□□□ 0.04
PCDH15-223ENST00000495484 URB2Q14146 1524 aaKnown RBP15.29■□□□□ 0.04
PCDH15-223ENST00000495484 FGD5Q6ZNL6 1462 aa15.24■□□□□ 0.03
PCDH15-223ENST00000495484 WDR62O43379 1518 aa15.21■□□□□ 0.03
PCDH15-223ENST00000495484 POLA1P09884 1462 aaPredicted RBP15.21■□□□□ 0.03
PCDH15-223ENST00000495484 EEA1Q15075 1411 aa15.21■□□□□ 0.03
PCDH15-223ENST00000495484 SOGA1O94964 1423 aa15.2■□□□□ 0.02
PCDH15-223ENST00000495484 THOC2Q8NI27 1593 aaKnown RBP15.17■□□□□ 0.02
PCDH15-223ENST00000495484 FAM9AQ8IZU1 332 aaPredicted RBP15.16■□□□□ 0.02
PCDH15-223ENST00000495484 KIF27Q86VH2 1401 aa15.16■□□□□ 0.02
PCDH15-223ENST00000495484 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
PCDH15-223ENST00000495484 ABCA10Q8WWZ4 1543 aa15.13■□□□□ 0.01
PCDH15-223ENST00000495484 RAD54L2Q9Y4B4 1467 aa15.13■□□□□ 0.01
PCDH15-223ENST00000495484 CUX2O14529 1486 aa15.12■□□□□ 0.01
PCDH15-223ENST00000495484 IFT140Q96RY7 1462 aa15.12■□□□□ 0.01
PCDH15-223ENST00000495484 RUSC2Q8N2Y8 1516 aa15.09■□□□□ 0.01
PCDH15-223ENST00000495484 TARBP1Q13395 1621 aaKnown RBP15.06■□□□□ 0
PCDH15-223ENST00000495484 TDRD9Q8NDG6 1382 aaKnown RBP15.04■□□□□ -0
PCDH15-223ENST00000495484 IGF1RP08069 1367 aa15.03■□□□□ -0
PCDH15-223ENST00000495484 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
PCDH15-223ENST00000495484 WDR97A6NE52 1622 aa15.01□□□□□ -0.01
PCDH15-223ENST00000495484 LOC105371045A0A1W2PR82 267 aa14.98□□□□□ -0.01
PCDH15-223ENST00000495484 AQRO60306 1485 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCDH15-223ENST00000495484 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
PCDH15-223ENST00000495484 ERICH3Q5RHP9 1530 aa14.96□□□□□ -0.01
PCDH15-223ENST00000495484 PRXQ9BXM0 1461 aa14.96□□□□□ -0.01
PCDH15-223ENST00000495484 ZNF608Q9ULD9 1512 aaPredicted RBP14.96□□□□□ -0.01
PCDH15-223ENST00000495484 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.02
PCDH15-223ENST00000495484 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
PCDH15-223ENST00000495484 GOLGA3Q08378 1498 aa14.93□□□□□ -0.02
PCDH15-223ENST00000495484 KIF21BO75037 1637 aa14.92□□□□□ -0.02
PCDH15-223ENST00000495484 UBTFP17480 764 aaKnown RBP14.91□□□□□ -0.02
PCDH15-223ENST00000495484 RAPGEF2Q9Y4G8 1499 aa14.9□□□□□ -0.02
PCDH15-223ENST00000495484 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
PCDH15-223ENST00000495484 EIF4G3O43432 1585 aaKnown RBP14.88□□□□□ -0.03
PCDH15-223ENST00000495484 CUL7Q14999 1698 aa14.88□□□□□ -0.03
PCDH15-223ENST00000495484 FHAD1B1AJZ9 1412 aa14.88□□□□□ -0.03
PCDH15-223ENST00000495484 TNIKQ9UKE5 1360 aa14.87□□□□□ -0.03
PCDH15-223ENST00000495484 MAGI1Q96QZ7 1491 aaPredicted RBP14.85□□□□□ -0.03
PCDH15-223ENST00000495484 PBRM1Q86U86 1689 aa14.83□□□□□ -0.04
PCDH15-223ENST00000495484 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
PCDH15-223ENST00000495484 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
PCDH15-223ENST00000495484 ADAMTS12P58397 1594 aa14.79□□□□□ -0.04
PCDH15-223ENST00000495484 SYNJ2O15056 1496 aa14.79□□□□□ -0.04
PCDH15-223ENST00000495484 FBLN2P98095 1184 aa14.76□□□□□ -0.05
PCDH15-223ENST00000495484 GRIN2AQ12879 1464 aa14.74□□□□□ -0.05
PCDH15-223ENST00000495484 CEP162Q5TB80 1403 aa14.72□□□□□ -0.05
PCDH15-223ENST00000495484 AEBP2Q6ZN18 517 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms