RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
PKP4-215ENST00000494945 DHX29Q7Z478 1369 aaKnown RBP16.21■□□□□ 0.19
PKP4-215ENST00000494945 PRDM15P57071 1507 aaPredicted RBP16.19■□□□□ 0.18
PKP4-215ENST00000494945 ARHGEF40Q8TER5 1519 aa16.19■□□□□ 0.18
PKP4-215ENST00000494945 FAM135AQ9P2D6 1515 aa16.19■□□□□ 0.18
PKP4-215ENST00000494945 MROH1Q8NDA8 1641 aa16.19■□□□□ 0.18
PKP4-215ENST00000494945 TET3O43151 1660 aa16.18■□□□□ 0.18
PKP4-215ENST00000494945 CEP152O94986 1710 aa16.18■□□□□ 0.18
PKP4-215ENST00000494945 VWDEQ8N2E2 1590 aa16.17■□□□□ 0.18
PKP4-215ENST00000494945 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
PKP4-215ENST00000494945 MPHOSPH9Q99550 1183 aa16.17■□□□□ 0.18
PKP4-215ENST00000494945 COL17A1Q9UMD9 1497 aaPredicted RBP16.16■□□□□ 0.18
PKP4-215ENST00000494945 NUP155O75694 1391 aa16.16■□□□□ 0.18
PKP4-215ENST00000494945 ZC3H13Q5T200 1668 aaKnown RBP16.16■□□□□ 0.18
PKP4-215ENST00000494945 E9PCH4 1651 aa16.14■□□□□ 0.18
PKP4-215ENST00000494945 YEATS2Q9ULM3 1422 aa16.14■□□□□ 0.17
PKP4-215ENST00000494945 ATP10AO60312 1499 aa16.14■□□□□ 0.17
PKP4-215ENST00000494945 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
PKP4-215ENST00000494945 SPHKAPQ2M3C7 1700 aa16.13■□□□□ 0.17
PKP4-215ENST00000494945 AGLP35573 1532 aa16.12■□□□□ 0.17
PKP4-215ENST00000494945 SIGLEC1Q9BZZ2 1709 aa16.11■□□□□ 0.17
PKP4-215ENST00000494945 CFAP65Q6ZU64 1925 aaKnown RBP16.1■□□□□ 0.17
PKP4-215ENST00000494945 KANK1Q14678 1352 aa16.1■□□□□ 0.17
PKP4-215ENST00000494945 LMTK2Q8IWU2 1503 aa16.09■□□□□ 0.17
PKP4-215ENST00000494945 CAMSAP1Q5T5Y3 1602 aa16.09■□□□□ 0.17
PKP4-215ENST00000494945 KIF3BO15066 747 aa16.09■□□□□ 0.17
PKP4-215ENST00000494945 ANKRD30BQ9BXX2 1392 aa16.08■□□□□ 0.16
PKP4-215ENST00000494945 EFCAB6Q5THR3 1501 aa16.08■□□□□ 0.16
PKP4-215ENST00000494945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.163e-8■□□□□ 8.6
PKP4-215ENST00000494945 PKD2Q13563 968 aa16.06■□□□□ 0.16
PKP4-215ENST00000494945 ABCC3O15438 1527 aa16.04■□□□□ 0.16
PKP4-215ENST00000494945 TIMELESSQ9UNS1 1208 aa16.04■□□□□ 0.16
PKP4-215ENST00000494945 RPRD2Q5VT52 1461 aaKnown RBP16.03■□□□□ 0.16
PKP4-215ENST00000494945 KIF1BO60333 1816 aa16.03■□□□□ 0.16
PKP4-215ENST00000494945 SIN3AQ96ST3 1273 aa16.03■□□□□ 0.16
PKP4-215ENST00000494945 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.16
PKP4-215ENST00000494945 FOXD1Q16676 465 aa16.02■□□□□ 0.16
PKP4-215ENST00000494945 TRPM2O94759 1503 aa16.01■□□□□ 0.15
PKP4-215ENST00000494945 NEUROD1Q13562 356 aa16■□□□□ 0.15
PKP4-215ENST00000494945 MROH2AA6NES4 1674 aa15.98■□□□□ 0.15
PKP4-215ENST00000494945 PREX1Q8TCU6 1659 aa15.98■□□□□ 0.15
PKP4-215ENST00000494945 TONSLQ96HA7 1378 aa15.98■□□□□ 0.15
PKP4-215ENST00000494945 GGT6Q6P531 493 aa15.97■□□□□ 0.15
PKP4-215ENST00000494945 CLTCL1P53675 1640 aa15.97■□□□□ 0.15
PKP4-215ENST00000494945 PLA2R1Q13018 1463 aa15.97■□□□□ 0.15
PKP4-215ENST00000494945 PTPRTO14522 1441 aa15.96■□□□□ 0.15
PKP4-215ENST00000494945 FER1L4A9Z1Z3 1794 aa15.96■□□□□ 0.15
PKP4-215ENST00000494945 PPP6R1Q9UPN7 881 aa15.96■□□□□ 0.15
PKP4-215ENST00000494945 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
PKP4-215ENST00000494945 ARHGAP31Q2M1Z3 1444 aa15.94■□□□□ 0.14
PKP4-215ENST00000494945 NEURL4Q96JN8 1562 aa15.94■□□□□ 0.14
PKP4-215ENST00000494945 WASHC2CQ9Y4E1 1318 aa15.94■□□□□ 0.14
PKP4-215ENST00000494945 PIK3C2BO00750 1634 aa15.93■□□□□ 0.14
PKP4-215ENST00000494945 NPATQ14207 1427 aa15.92■□□□□ 0.14
PKP4-215ENST00000494945 IFT172Q9UG01 1749 aa15.91■□□□□ 0.14
PKP4-215ENST00000494945 MYO5BQ9ULV0 1848 aa15.9■□□□□ 0.14
PKP4-215ENST00000494945 SYNMO15061 1565 aa15.89■□□□□ 0.13
PKP4-215ENST00000494945 CNTLNQ9NXG0 1405 aa15.89■□□□□ 0.13
PKP4-215ENST00000494945 PPP1R15AO75807 674 aaPredicted RBP15.87■□□□□ 0.13
PKP4-215ENST00000494945 NOS1P29475 1434 aa15.86■□□□□ 0.13
PKP4-215ENST00000494945 C3P01024 1663 aa15.86■□□□□ 0.13
PKP4-215ENST00000494945 PPLO60437 1756 aa15.85■□□□□ 0.13
PKP4-215ENST00000494945 SPATA31D1Q6ZQQ2 1576 aa15.85■□□□□ 0.13
PKP4-215ENST00000494945 UGGT1Q9NYU2 1555 aa15.85■□□□□ 0.13
PKP4-215ENST00000494945 L3MBTL2Q969R5 705 aa15.85■□□□□ 0.13
PKP4-215ENST00000494945 ARID4BQ4LE39 1312 aaPredicted RBP15.85■□□□□ 0.13
PKP4-215ENST00000494945 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
PKP4-215ENST00000494945 ERVK-7P63135 1459 aa15.83■□□□□ 0.12
PKP4-215ENST00000494945 ADGRB3O60242 1522 aa15.83■□□□□ 0.12
PKP4-215ENST00000494945 MLECQ14165 292 aa15.82■□□□□ 0.12
PKP4-215ENST00000494945 KDM5AP29375 1690 aaKnown RBP15.82■□□□□ 0.12
PKP4-215ENST00000494945 ADAMTSL3P82987 1691 aa15.82■□□□□ 0.12
PKP4-215ENST00000494945 TRPM1Q7Z4N2 1603 aa15.81■□□□□ 0.12
PKP4-215ENST00000494945 RIMS1Q86UR5 1692 aaKnown RBP15.81■□□□□ 0.12
PKP4-215ENST00000494945 ESF1Q9H501 851 aaKnown RBP15.81■□□□□ 0.12
PKP4-215ENST00000494945 MADDQ8WXG6 1647 aa15.8■□□□□ 0.12
PKP4-215ENST00000494945 UHRF1BP1Q6BDS2 1440 aa15.8■□□□□ 0.12
PKP4-215ENST00000494945 KIAA1210Q9ULL0 1709 aa15.8■□□□□ 0.12
PKP4-215ENST00000494945 TMEM131LA2VDJ0 1609 aa15.79■□□□□ 0.12
PKP4-215ENST00000494945 ZMYM3Q14202 1370 aa15.77■□□□□ 0.12
PKP4-215ENST00000494945 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
PKP4-215ENST00000494945 LAMC1P11047 1609 aa15.76■□□□□ 0.11
PKP4-215ENST00000494945 SLC52A1Q9NWF4 448 aa15.75■□□□□ 0.11
PKP4-215ENST00000494945 UBR1Q8IWV7 1749 aa15.74■□□□□ 0.11
PKP4-215ENST00000494945 MYOM2P54296 1465 aa15.74■□□□□ 0.11
PKP4-215ENST00000494945 RALGAPBQ86X10 1494 aa15.74■□□□□ 0.11
PKP4-215ENST00000494945 STAC3Q96MF2 364 aa15.74■□□□□ 0.11
PKP4-215ENST00000494945 SETD1BQ9UPS6 1966 aaKnown RBP15.73■□□□□ 0.11
PKP4-215ENST00000494945 RGL3Q3MIN7 710 aa15.73■□□□□ 0.11
PKP4-215ENST00000494945 DCAF11Q8TEB1 546 aa15.73■□□□□ 0.11
PKP4-215ENST00000494945 PRAG1Q86YV5 1406 aa15.73■□□□□ 0.11
PKP4-215ENST00000494945 NEXMIFQ5QGS0 1516 aa15.72■□□□□ 0.11
PKP4-215ENST00000494945 NBPF8Q3BBV2 869 aa15.71■□□□□ 0.11
PKP4-215ENST00000494945 MYO3AQ8NEV4 1616 aa15.7■□□□□ 0.1
PKP4-215ENST00000494945 FBXO31Q5XUX0 539 aaPredicted RBP15.7■□□□□ 0.1
PKP4-215ENST00000494945 KDM2AQ9Y2K7 1162 aa15.69■□□□□ 0.1
PKP4-215ENST00000494945 RPGRIP1LQ68CZ1 1315 aa15.68■□□□□ 0.1
PKP4-215ENST00000494945 IQGAP1P46940 1657 aa15.68■□□□□ 0.1
PKP4-215ENST00000494945 NRXN1Q9ULB1 1477 aa15.68■□□□□ 0.1
PKP4-215ENST00000494945 TNRQ92752 1358 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms