RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 DENND4BO75064 1496 aaPredicted RBP10.48□□□□□ -0.73
SMARCE1-211ENST00000493660 MLH3Q9UHC1 1453 aa10.47□□□□□ -0.73
SMARCE1-211ENST00000493660 ZMYM4Q5VZL5 1548 aa10.47□□□□□ -0.73
SMARCE1-211ENST00000493660 SPAG9O60271 1321 aaKnown RBP10.47□□□□□ -0.73
SMARCE1-211ENST00000493660 PIAS4Q8N2W9 510 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-211ENST00000493660 FRMPD1Q5SYB0 1578 aa10.46□□□□□ -0.74
SMARCE1-211ENST00000493660 BCORL1Q5H9F3 1711 aa10.46□□□□□ -0.74
SMARCE1-211ENST00000493660 DEPDC5O75140 1603 aa10.45□□□□□ -0.74
SMARCE1-211ENST00000493660 MAGI2Q86UL8 1455 aa10.44□□□□□ -0.74
SMARCE1-211ENST00000493660 IQGAP3Q86VI3 1631 aa10.43□□□□□ -0.74
SMARCE1-211ENST00000493660 ABCA6Q8N139 1617 aa10.43□□□□□ -0.74
SMARCE1-211ENST00000493660 AFAP1Q8N556 730 aa10.43□□□□□ -0.74
SMARCE1-211ENST00000493660 PZPP20742 1482 aa10.42□□□□□ -0.74
SMARCE1-211ENST00000493660 RNF17Q9BXT8 1623 aaKnown RBP10.41□□□□□ -0.74
SMARCE1-211ENST00000493660 DIP2CQ9Y2E4 1556 aa10.41□□□□□ -0.74
SMARCE1-211ENST00000493660 REREQ9P2R6 1566 aa10.4□□□□□ -0.74
SMARCE1-211ENST00000493660 DHX29Q7Z478 1369 aaKnown RBP10.4□□□□□ -0.74
SMARCE1-211ENST00000493660 A2MP01023 1474 aa10.4□□□□□ -0.75
SMARCE1-211ENST00000493660 TRIM52Q96A61 297 aa10.4□□□□□ -0.75
SMARCE1-211ENST00000493660 EIF5BO60841 1220 aaKnown RBP10.39□□□□□ -0.75
SMARCE1-211ENST00000493660 PRDM15P57071 1507 aaPredicted RBP10.39□□□□□ -0.75
SMARCE1-211ENST00000493660 FAM135AQ9P2D6 1515 aa10.39□□□□□ -0.75
SMARCE1-211ENST00000493660 VWDEQ8N2E2 1590 aa10.38□□□□□ -0.75
SMARCE1-211ENST00000493660 MPHOSPH9Q99550 1183 aa10.38□□□□□ -0.75
SMARCE1-211ENST00000493660 MROH1Q8NDA8 1641 aa10.37□□□□□ -0.75
SMARCE1-211ENST00000493660 NUP155O75694 1391 aa10.37□□□□□ -0.75
SMARCE1-211ENST00000493660 TET3O43151 1660 aa10.37□□□□□ -0.75
SMARCE1-211ENST00000493660 ARHGEF40Q8TER5 1519 aa10.36□□□□□ -0.75
SMARCE1-211ENST00000493660 RAPGEF3O95398 923 aa10.35□□□□□ -0.75
SMARCE1-211ENST00000493660 UBE2Q2Q8WVN8 375 aa10.35□□□□□ -0.75
SMARCE1-211ENST00000493660 MYT1LQ9UL68 1186 aa10.35□□□□□ -0.75
SMARCE1-211ENST00000493660 ZC3H13Q5T200 1668 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-211ENST00000493660 SLC4A1APQ9BWU0 796 aaKnown RBP10.35□□□□□ -0.75
SMARCE1-211ENST00000493660 TIMELESSQ9UNS1 1208 aa10.35□□□□□ -0.75
SMARCE1-211ENST00000493660 AGLP35573 1532 aa10.34□□□□□ -0.75
SMARCE1-211ENST00000493660 LMTK2Q8IWU2 1503 aa10.34□□□□□ -0.75
SMARCE1-211ENST00000493660 ATP10AO60312 1499 aa10.34□□□□□ -0.75
SMARCE1-211ENST00000493660 KANK1Q14678 1352 aa10.33□□□□□ -0.76
SMARCE1-211ENST00000493660 ANKRD30BQ9BXX2 1392 aa10.33□□□□□ -0.76
SMARCE1-211ENST00000493660 YEATS2Q9ULM3 1422 aa10.33□□□□□ -0.76
SMARCE1-211ENST00000493660 COL17A1Q9UMD9 1497 aaPredicted RBP10.33□□□□□ -0.76
SMARCE1-211ENST00000493660 E9PCH4 1651 aa10.32□□□□□ -0.76
SMARCE1-211ENST00000493660 CEP152O94986 1710 aa10.32□□□□□ -0.76
SMARCE1-211ENST00000493660 SPHKAPQ2M3C7 1700 aa10.31□□□□□ -0.76
SMARCE1-211ENST00000493660 RPRD2Q5VT52 1461 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-211ENST00000493660 EFCAB6Q5THR3 1501 aa10.3□□□□□ -0.76
SMARCE1-211ENST00000493660 PKD2Q13563 968 aa10.3□□□□□ -0.76
SMARCE1-211ENST00000493660 KIF3BO15066 747 aa10.3□□□□□ -0.76
SMARCE1-211ENST00000493660 CACNB1Q02641 598 aaPredicted RBP10.3□□□□□ -0.76
SMARCE1-211ENST00000493660 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-211ENST00000493660 CAMSAP1Q5T5Y3 1602 aa10.29□□□□□ -0.76
SMARCE1-211ENST00000493660 ABCC3O15438 1527 aa10.28□□□□□ -0.76
SMARCE1-211ENST00000493660 SIN3AQ96ST3 1273 aa10.28□□□□□ -0.76
SMARCE1-211ENST00000493660 TRPM2O94759 1503 aa10.28□□□□□ -0.76
SMARCE1-211ENST00000493660 SIGLEC1Q9BZZ2 1709 aa10.27□□□□□ -0.76
SMARCE1-211ENST00000493660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.27□□□□□ -0.769e-9■■□□□ 12.3
SMARCE1-211ENST00000493660 TONSLQ96HA7 1378 aa10.27□□□□□ -0.77
SMARCE1-211ENST00000493660 PPP6R1Q9UPN7 881 aa10.26□□□□□ -0.77
SMARCE1-211ENST00000493660 PTPRTO14522 1441 aa10.25□□□□□ -0.77
SMARCE1-211ENST00000493660 NEURL4Q96JN8 1562 aa10.25□□□□□ -0.77
SMARCE1-211ENST00000493660 DIEXFQ68CQ4 756 aaKnown RBP10.25□□□□□ -0.77
SMARCE1-211ENST00000493660 TSHZ2Q9NRE2 1034 aa10.24□□□□□ -0.77
SMARCE1-211ENST00000493660 ARHGAP31Q2M1Z3 1444 aa10.24□□□□□ -0.77
SMARCE1-211ENST00000493660 PLA2R1Q13018 1463 aa10.24□□□□□ -0.77
SMARCE1-211ENST00000493660 CCDC144AA2RUR9 1427 aa10.23□□□□□ -0.77
SMARCE1-211ENST00000493660 ANO8Q9HCE9 1232 aaPredicted RBP10.23□□□□□ -0.77
SMARCE1-211ENST00000493660 KIF1BO60333 1816 aa10.23□□□□□ -0.77
SMARCE1-211ENST00000493660 CLTCL1P53675 1640 aa10.22□□□□□ -0.77
SMARCE1-211ENST00000493660 MROH2AA6NES4 1674 aa10.22□□□□□ -0.77
SMARCE1-211ENST00000493660 CLTCQ00610 1675 aaKnown RBP10.22□□□□□ -0.77
SMARCE1-211ENST00000493660 PREX1Q8TCU6 1659 aa10.21□□□□□ -0.77
SMARCE1-211ENST00000493660 CNTLNQ9NXG0 1405 aa10.21□□□□□ -0.78
SMARCE1-211ENST00000493660 PPP1R15AO75807 674 aaPredicted RBP10.21□□□□□ -0.78
SMARCE1-211ENST00000493660 GGT6Q6P531 493 aa10.21□□□□□ -0.78
SMARCE1-211ENST00000493660 NPATQ14207 1427 aa10.2□□□□□ -0.78
SMARCE1-211ENST00000493660 PIK3C2BO00750 1634 aa10.2□□□□□ -0.78
SMARCE1-211ENST00000493660 PLPPR3Q6T4P5 718 aa10.2□□□□□ -0.78
SMARCE1-211ENST00000493660 WASHC2CQ9Y4E1 1318 aa10.2□□□□□ -0.78
SMARCE1-211ENST00000493660 ERICH6BQ5W0A0 696 aa10.19□□□□□ -0.78
SMARCE1-211ENST00000493660 NOS1P29475 1434 aa10.19□□□□□ -0.78
SMARCE1-211ENST00000493660 CFAP65Q6ZU64 1925 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-211ENST00000493660 SYNMO15061 1565 aa10.18□□□□□ -0.78
SMARCE1-211ENST00000493660 UHRF1BP1Q6BDS2 1440 aa10.17□□□□□ -0.78
SMARCE1-211ENST00000493660 IFT172Q9UG01 1749 aa10.17□□□□□ -0.78
SMARCE1-211ENST00000493660 L3MBTL2Q969R5 705 aa10.17□□□□□ -0.78
SMARCE1-211ENST00000493660 SPATA31E1Q6ZUB1 1445 aa10.17□□□□□ -0.78
SMARCE1-211ENST00000493660 FER1L4A9Z1Z3 1794 aa10.16□□□□□ -0.78
SMARCE1-211ENST00000493660 SPATA31D1Q6ZQQ2 1576 aa10.16□□□□□ -0.78
SMARCE1-211ENST00000493660 ADGRB3O60242 1522 aa10.16□□□□□ -0.78
SMARCE1-211ENST00000493660 ERVK-7P63135 1459 aa10.15□□□□□ -0.78
SMARCE1-211ENST00000493660 STAC3Q96MF2 364 aa10.14□□□□□ -0.79
SMARCE1-211ENST00000493660 UGGT1Q9NYU2 1555 aa10.14□□□□□ -0.79
SMARCE1-211ENST00000493660 PPLO60437 1756 aa10.13□□□□□ -0.79
SMARCE1-211ENST00000493660 LAMC1P11047 1609 aa10.13□□□□□ -0.79
SMARCE1-211ENST00000493660 TRPM1Q7Z4N2 1603 aa10.13□□□□□ -0.79
SMARCE1-211ENST00000493660 KIAA1210Q9ULL0 1709 aa10.13□□□□□ -0.79
SMARCE1-211ENST00000493660 KDM5AP29375 1690 aaKnown RBP10.13□□□□□ -0.79
SMARCE1-211ENST00000493660 RALGAPBQ86X10 1494 aa10.13□□□□□ -0.79
SMARCE1-211ENST00000493660 MYOM2P54296 1465 aa10.12□□□□□ -0.79
SMARCE1-211ENST00000493660 MADDQ8WXG6 1647 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms