RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 RICTORQ6R327 1708 aa13.1□□□□□ -0.31
SMARCC1-208ENST00000492896 TET3O43151 1660 aa13.08□□□□□ -0.31
SMARCC1-208ENST00000492896 PRDM15P57071 1507 aaPredicted RBP13.08□□□□□ -0.32
SMARCC1-208ENST00000492896 ABCA6Q8N139 1617 aa13.07□□□□□ -0.32
SMARCC1-208ENST00000492896 RNF17Q9BXT8 1623 aaKnown RBP13.07□□□□□ -0.32
SMARCC1-208ENST00000492896 E9PCH4 1651 aa13.07□□□□□ -0.32
SMARCC1-208ENST00000492896 TSPOAP1O95153 1857 aa13.07□□□□□ -0.32
SMARCC1-208ENST00000492896 BCORL1Q5H9F3 1711 aa13.07□□□□□ -0.32
SMARCC1-208ENST00000492896 PPRC1Q5VV67 1664 aaKnown RBP13.06□□□□□ -0.32
SMARCC1-208ENST00000492896 MLH3Q9UHC1 1453 aa13.06□□□□□ -0.32
SMARCC1-208ENST00000492896 SPHKAPQ2M3C7 1700 aa13.06□□□□□ -0.32
SMARCC1-208ENST00000492896 VWDEQ8N2E2 1590 aa13.06□□□□□ -0.32
SMARCC1-208ENST00000492896 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
SMARCC1-208ENST00000492896 KIF13AQ9H1H9 1805 aa13.05□□□□□ -0.32
SMARCC1-208ENST00000492896 L3MBTL2Q969R5 705 aa13.05□□□□□ -0.32
SMARCC1-208ENST00000492896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.04□□□□□ -0.322e-7■□□□□ 10.4
SMARCC1-208ENST00000492896 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
SMARCC1-208ENST00000492896 DHX29Q7Z478 1369 aaKnown RBP13.04□□□□□ -0.32
SMARCC1-208ENST00000492896 A2MP01023 1474 aa13.04□□□□□ -0.32
SMARCC1-208ENST00000492896 CEP152O94986 1710 aa13.03□□□□□ -0.32
SMARCC1-208ENST00000492896 FRMPD1Q5SYB0 1578 aa13.03□□□□□ -0.32
SMARCC1-208ENST00000492896 KANK1Q14678 1352 aa13.02□□□□□ -0.33
SMARCC1-208ENST00000492896 CCDC144AA2RUR9 1427 aa13.02□□□□□ -0.33
SMARCC1-208ENST00000492896 ATP10AO60312 1499 aa13.02□□□□□ -0.33
SMARCC1-208ENST00000492896 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.33
SMARCC1-208ENST00000492896 POLR1AO95602 1720 aaPredicted RBP13□□□□□ -0.33
SMARCC1-208ENST00000492896 TRPM2O94759 1503 aa13□□□□□ -0.33
SMARCC1-208ENST00000492896 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
SMARCC1-208ENST00000492896 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
SMARCC1-208ENST00000492896 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
SMARCC1-208ENST00000492896 UHRF1BP1Q6BDS2 1440 aa12.98□□□□□ -0.33
SMARCC1-208ENST00000492896 LMTK2Q8IWU2 1503 aa12.98□□□□□ -0.33
SMARCC1-208ENST00000492896 KIF3BO15066 747 aa12.97□□□□□ -0.33
SMARCC1-208ENST00000492896 FAM69CQ0P6D2 419 aa12.97□□□□□ -0.33
SMARCC1-208ENST00000492896 RALGAPBQ86X10 1494 aa12.97□□□□□ -0.33
SMARCC1-208ENST00000492896 ZC3H13Q5T200 1668 aaKnown RBP12.96□□□□□ -0.33
SMARCC1-208ENST00000492896 CLTCL1P53675 1640 aa12.96□□□□□ -0.33
SMARCC1-208ENST00000492896 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
SMARCC1-208ENST00000492896 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
SMARCC1-208ENST00000492896 KIF1BO60333 1816 aa12.95□□□□□ -0.34
SMARCC1-208ENST00000492896 CAMSAP1Q5T5Y3 1602 aa12.94□□□□□ -0.34
SMARCC1-208ENST00000492896 PTPRTO14522 1441 aa12.94□□□□□ -0.34
SMARCC1-208ENST00000492896 RAPGEF3O95398 923 aa12.93□□□□□ -0.34
SMARCC1-208ENST00000492896 EIF4G2P78344 907 aaKnown RBP eCLIP12.93□□□□□ -0.34
SMARCC1-208ENST00000492896 HSPA5P11021 654 aaKnown RBP12.92□□□□□ -0.34
SMARCC1-208ENST00000492896 NEURL4Q96JN8 1562 aa12.92□□□□□ -0.34
SMARCC1-208ENST00000492896 ABCC3O15438 1527 aa12.92□□□□□ -0.34
SMARCC1-208ENST00000492896 LAMC1P11047 1609 aa12.91□□□□□ -0.34
SMARCC1-208ENST00000492896 REREQ9P2R6 1566 aa12.91□□□□□ -0.34
SMARCC1-208ENST00000492896 MIER1Q8N108 512 aa12.91□□□□□ -0.34
SMARCC1-208ENST00000492896 HIRIP3Q9BW71 556 aaPredicted RBP12.91□□□□□ -0.34
SMARCC1-208ENST00000492896 YEATS2Q9ULM3 1422 aa12.9□□□□□ -0.34
SMARCC1-208ENST00000492896 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
SMARCC1-208ENST00000492896 PRAG1Q86YV5 1406 aa12.89□□□□□ -0.35
SMARCC1-208ENST00000492896 IFT172Q9UG01 1749 aa12.89□□□□□ -0.35
SMARCC1-208ENST00000492896 ZNF326Q5BKZ1 582 aaKnown RBP12.89□□□□□ -0.35
SMARCC1-208ENST00000492896 CFAP65Q6ZU64 1925 aaKnown RBP12.89□□□□□ -0.35
SMARCC1-208ENST00000492896 ARHGEF40Q8TER5 1519 aa12.88□□□□□ -0.35
SMARCC1-208ENST00000492896 MADDQ8WXG6 1647 aa12.88□□□□□ -0.35
SMARCC1-208ENST00000492896 MROH2AA6NES4 1674 aa12.88□□□□□ -0.35
SMARCC1-208ENST00000492896 DCAF11Q8TEB1 546 aa12.87□□□□□ -0.35
SMARCC1-208ENST00000492896 USP47Q96K76 1375 aa12.86□□□□□ -0.35
SMARCC1-208ENST00000492896 SIGLEC1Q9BZZ2 1709 aa12.86□□□□□ -0.35
SMARCC1-208ENST00000492896 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
SMARCC1-208ENST00000492896 AGLP35573 1532 aa12.85□□□□□ -0.35
SMARCC1-208ENST00000492896 KDM2AQ9Y2K7 1162 aa12.85□□□□□ -0.35
SMARCC1-208ENST00000492896 NPATQ14207 1427 aa12.85□□□□□ -0.35
SMARCC1-208ENST00000492896 UGGT1Q9NYU2 1555 aa12.85□□□□□ -0.35
SMARCC1-208ENST00000492896 KIAA1210Q9ULL0 1709 aa12.85□□□□□ -0.35
SMARCC1-208ENST00000492896 ADGRB3O60242 1522 aa12.84□□□□□ -0.35
SMARCC1-208ENST00000492896 CNTLNQ9NXG0 1405 aa12.83□□□□□ -0.36
SMARCC1-208ENST00000492896 RGL3Q3MIN7 710 aa12.83□□□□□ -0.36
SMARCC1-208ENST00000492896 GGT6Q6P531 493 aa12.83□□□□□ -0.36
SMARCC1-208ENST00000492896 PIK3C2BO00750 1634 aa12.83□□□□□ -0.36
SMARCC1-208ENST00000492896 PREX1Q8TCU6 1659 aa12.83□□□□□ -0.36
SMARCC1-208ENST00000492896 ROCK2O75116 1388 aaKnown RBP12.82□□□□□ -0.36
SMARCC1-208ENST00000492896 CCDC7Q96M83 1385 aa12.82□□□□□ -0.36
SMARCC1-208ENST00000492896 IQGAP1P46940 1657 aa12.82□□□□□ -0.36
SMARCC1-208ENST00000492896 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
SMARCC1-208ENST00000492896 GPRASP1Q5JY77 1395 aa12.81□□□□□ -0.36
SMARCC1-208ENST00000492896 PPLO60437 1756 aa12.81□□□□□ -0.36
SMARCC1-208ENST00000492896 ARHGAP31Q2M1Z3 1444 aa12.81□□□□□ -0.36
SMARCC1-208ENST00000492896 MYOM2P54296 1465 aa12.81□□□□□ -0.36
SMARCC1-208ENST00000492896 CARD11Q9BXL7 1154 aa12.81□□□□□ -0.36
SMARCC1-208ENST00000492896 WASHC2CQ9Y4E1 1318 aa12.81□□□□□ -0.36
SMARCC1-208ENST00000492896 SYNMO15061 1565 aa12.81□□□□□ -0.36
SMARCC1-208ENST00000492896 CLTCQ00610 1675 aaKnown RBP12.8□□□□□ -0.36
SMARCC1-208ENST00000492896 NOS1P29475 1434 aa12.79□□□□□ -0.36
SMARCC1-208ENST00000492896 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
SMARCC1-208ENST00000492896 COL17A1Q9UMD9 1497 aaPredicted RBP12.78□□□□□ -0.36
SMARCC1-208ENST00000492896 MYO5BQ9ULV0 1848 aa12.76□□□□□ -0.37
SMARCC1-208ENST00000492896 ANP32CO43423 234 aa12.76□□□□□ -0.37
SMARCC1-208ENST00000492896 KIF7Q2M1P5 1343 aa12.76□□□□□ -0.37
SMARCC1-208ENST00000492896 CENPBP07199 599 aaPredicted RBP12.75□□□□□ -0.37
SMARCC1-208ENST00000492896 ARID4BQ4LE39 1312 aaPredicted RBP12.74□□□□□ -0.37
SMARCC1-208ENST00000492896 C11orf95C9JLR9 678 aaPredicted RBP12.74□□□□□ -0.37
SMARCC1-208ENST00000492896 NRXN1Q9ULB1 1477 aa12.73□□□□□ -0.37
SMARCC1-208ENST00000492896 ERVK-7P63135 1459 aa12.72□□□□□ -0.37
SMARCC1-208ENST00000492896 NBPF1Q3BBV0 1214 aa12.72□□□□□ -0.37
SMARCC1-208ENST00000492896 PPP6R1Q9UPN7 881 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms