RNA–Protein interactions for RNA: ENST00000492719.5

GAPDH-209, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 3

Gene GAPDH, Length 930 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-209ENST00000492719 SYCP2Q9BX26 1530 aa21.9■■□□□ 1.1
GAPDH-209ENST00000492719 A2MP01023 1474 aa21.89■■□□□ 1.09
GAPDH-209ENST00000492719 SPAG9O60271 1321 aaKnown RBP21.88■■□□□ 1.09
GAPDH-209ENST00000492719 DEPDC5O75140 1603 aa21.88■■□□□ 1.09
GAPDH-209ENST00000492719 TNRQ92752 1358 aa21.87■■□□□ 1.09
GAPDH-209ENST00000492719 INO80Q9ULG1 1556 aaPredicted RBP21.86■■□□□ 1.09
GAPDH-209ENST00000492719 XIRP1Q702N8 1843 aaKnown RBP21.85■■□□□ 1.09
GAPDH-209ENST00000492719 MED14O60244 1454 aa21.85■■□□□ 1.09
GAPDH-209ENST00000492719 UPF1Q92900 1129 aaKnown RBP eCLIP21.85■■□□□ 1.09
GAPDH-209ENST00000492719 CASKIN1Q8WXD9 1431 aa21.85■■□□□ 1.09
GAPDH-209ENST00000492719 FBXO31Q5XUX0 539 aaPredicted RBP21.84■■□□□ 1.09
GAPDH-209ENST00000492719 ZNF777Q9ULD5 760 aaPredicted RBP21.84■■□□□ 1.09
GAPDH-209ENST00000492719 SRCAPQ6ZRS2 3230 aa21.81■■□□□ 1.08
GAPDH-209ENST00000492719 ADGBQ8N7X0 1667 aa21.8■■□□□ 1.08
GAPDH-209ENST00000492719 UGGT1Q9NYU2 1555 aa21.8■■□□□ 1.08
GAPDH-209ENST00000492719 HNRNPMP52272 730 aaKnown RBP eCLIP21.78■■□□□ 1.08
GAPDH-209ENST00000492719 FAM135AQ9P2D6 1515 aa21.78■■□□□ 1.08
GAPDH-209ENST00000492719 THEMISQ8N1K5 641 aaPredicted RBP21.77■■□□□ 1.08
GAPDH-209ENST00000492719 CCDC18Q5T9S5 1454 aa21.77■■□□□ 1.07
GAPDH-209ENST00000492719 ZC3H13Q5T200 1668 aaKnown RBP21.76■■□□□ 1.07
GAPDH-209ENST00000492719 PZPP20742 1482 aa21.75■■□□□ 1.07
GAPDH-209ENST00000492719 ROBO1Q9Y6N7 1651 aa21.75■■□□□ 1.07
GAPDH-209ENST00000492719 TRIM52Q96A61 297 aa21.73■■□□□ 1.07
GAPDH-209ENST00000492719 FYCO1Q9BQS8 1478 aa21.72■■□□□ 1.07
GAPDH-209ENST00000492719 FAM135BQ49AJ0 1406 aa21.72■■□□□ 1.07
GAPDH-209ENST00000492719 NLRP1Q9C000 1473 aa21.71■■□□□ 1.07
GAPDH-209ENST00000492719 KDM5DQ9BY66 1539 aa21.69■■□□□ 1.06
GAPDH-209ENST00000492719 MIA2Q96PC5 1412 aa21.67■■□□□ 1.06
GAPDH-209ENST00000492719 PHLPP1O60346 1717 aa21.66■■□□□ 1.06
GAPDH-209ENST00000492719 GPATCH8Q9UKJ3 1502 aaKnown RBP21.64■■□□□ 1.05
GAPDH-209ENST00000492719 PLEKHH2Q8IVE3 1493 aa21.61■■□□□ 1.05
GAPDH-209ENST00000492719 KIAA1107Q9UPP5 1409 aa21.61■■□□□ 1.05
GAPDH-209ENST00000492719 WASHC2CQ9Y4E1 1318 aa21.58■■□□□ 1.05
GAPDH-209ENST00000492719 KIF3BO15066 747 aa21.58■■□□□ 1.05
GAPDH-209ENST00000492719 LRP6O75581 1613 aa21.58■■□□□ 1.04
GAPDH-209ENST00000492719 JCADQ9P266 1359 aa21.57■■□□□ 1.04
GAPDH-209ENST00000492719 SCAF11Q99590 1463 aaKnown RBP21.57■■□□□ 1.04
GAPDH-209ENST00000492719 UBR1Q8IWV7 1749 aa21.56■■□□□ 1.04
GAPDH-209ENST00000492719 CFAP65Q6ZU64 1925 aaKnown RBP21.56■■□□□ 1.04
GAPDH-209ENST00000492719 MEX3CQ5U5Q3 659 aaKnown RBP21.55■■□□□ 1.04
GAPDH-209ENST00000492719 TMEM94Q12767 1356 aa21.55■■□□□ 1.04
GAPDH-209ENST00000492719 DHX29Q7Z478 1369 aaKnown RBP21.54■■□□□ 1.04
GAPDH-209ENST00000492719 CFDP1Q9UEE9 299 aaPredicted RBP21.54■■□□□ 1.04
GAPDH-209ENST00000492719 LRRC9Q6ZRR7 1453 aa21.53■■□□□ 1.04
GAPDH-209ENST00000492719 ZNF772Q68DY9 489 aaPredicted RBP21.53■■□□□ 1.04
GAPDH-209ENST00000492719 MAP3K1Q13233 1512 aa21.53■■□□□ 1.04
GAPDH-209ENST00000492719 CEP162Q5TB80 1403 aa21.52■■□□□ 1.04
GAPDH-209ENST00000492719 RBM33Q96EV2 1170 aaKnown RBP21.51■■□□□ 1.03
GAPDH-209ENST00000492719 COL16A1Q07092 1604 aaPredicted RBP21.51■■□□□ 1.03
GAPDH-209ENST00000492719 RXRBP28702 533 aa21.49■■□□□ 1.03
GAPDH-209ENST00000492719 MTUS2Q5JR59 1369 aa21.48■■□□□ 1.03
GAPDH-209ENST00000492719 LTKP29376 864 aa21.48■■□□□ 1.03
GAPDH-209ENST00000492719 CCNB3Q8WWL7 1395 aa21.48■■□□□ 1.03
GAPDH-209ENST00000492719 ERVK-7P63135 1459 aa21.46■■□□□ 1.03
GAPDH-209ENST00000492719 ZNF644Q9H582 1327 aaPredicted RBP21.46■■□□□ 1.03
GAPDH-209ENST00000492719 TXNDC2Q86VQ3 553 aa21.45■■□□□ 1.02
GAPDH-209ENST00000492719 RTEL1-TNFRSF6BF6WH68 1400 aa21.45■■□□□ 1.02
GAPDH-209ENST00000492719 NCOA2Q15596 1464 aa21.45■■□□□ 1.02
GAPDH-209ENST00000492719 CDK12Q9NYV4 1490 aaPredicted RBP21.45■■□□□ 1.02
GAPDH-209ENST00000492719 ARHGAP23Q9P227 1491 aa21.43■■□□□ 1.02
GAPDH-209ENST00000492719 MBD5Q9P267 1494 aa21.43■■□□□ 1.02
GAPDH-209ENST00000492719 SLIT1O75093 1534 aa21.42■■□□□ 1.02
GAPDH-209ENST00000492719 TIAM1Q13009 1591 aa21.42■■□□□ 1.02
GAPDH-209ENST00000492719 PROSER2Q86WR7 435 aaPredicted RBP21.42■■□□□ 1.02
GAPDH-209ENST00000492719 SETBP1Q9Y6X0 1596 aa21.42■■□□□ 1.02
GAPDH-209ENST00000492719 ABCC3O15438 1527 aa21.41■■□□□ 1.02
GAPDH-209ENST00000492719 SPATA31A6Q5VVP1 1343 aa21.41■■□□□ 1.02
GAPDH-209ENST00000492719 SHPRHQ149N8 1683 aa21.4■■□□□ 1.02
GAPDH-209ENST00000492719 EHBP1L1Q8N3D4 1523 aa21.39■■□□□ 1.02
GAPDH-209ENST00000492719 RGS12O14924 1447 aa21.39■■□□□ 1.02
GAPDH-209ENST00000492719 LOC105371045A0A1W2PR82 267 aa21.39■■□□□ 1.01
GAPDH-209ENST00000492719 CEP152O94986 1710 aa21.38■■□□□ 1.01
GAPDH-209ENST00000492719 PRDM15P57071 1507 aaPredicted RBP21.38■■□□□ 1.01
GAPDH-209ENST00000492719 MSH6P52701 1360 aa21.37■■□□□ 1.01
GAPDH-209ENST00000492719 SLAIN2Q9P270 581 aa21.37■■□□□ 1.01
GAPDH-209ENST00000492719 EID1Q9Y6B2 187 aa21.36■■□□□ 1.01
GAPDH-209ENST00000492719 FGD6Q6ZV73 1430 aa21.36■■□□□ 1.01
GAPDH-209ENST00000492719 KCNA6P17658 529 aa21.35■■□□□ 1.01
GAPDH-209ENST00000492719 NUTM2BA6NNL0 878 aaPredicted RBP21.34■■□□□ 1.01
GAPDH-209ENST00000492719 NUTM2EB1AL46 878 aaPredicted RBP21.34■■□□□ 1.01
GAPDH-209ENST00000492719 NUTM2DQ5VT03 806 aaPredicted RBP21.34■■□□□ 1.01
GAPDH-209ENST00000492719 NUTM2AQ8IVF1 878 aaPredicted RBP21.34■■□□□ 1.01
GAPDH-209ENST00000492719 ZRANB1Q9UGI0 708 aa21.34■■□□□ 1.01
GAPDH-209ENST00000492719 NWD1Q149M9 1564 aa21.32■■□□□ 1
GAPDH-209ENST00000492719 KDM5AP29375 1690 aaKnown RBP21.32■■□□□ 1
GAPDH-209ENST00000492719 PIK3C2BO00750 1634 aa21.32■■□□□ 1
GAPDH-209ENST00000492719 NKTRP30414 1462 aaKnown RBP21.32■■□□□ 1
GAPDH-209ENST00000492719 CCDC141Q6ZP82 1450 aa21.32■■□□□ 1
GAPDH-209ENST00000492719 AFF2P51816 1311 aa21.31■■□□□ 1
GAPDH-209ENST00000492719 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
GAPDH-209ENST00000492719 RSPH4AQ5TD94 716 aa21.31■■□□□ 1
GAPDH-209ENST00000492719 SLC26A8Q96RN1 970 aa21.31■■□□□ 1
GAPDH-209ENST00000492719 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
GAPDH-209ENST00000492719 TMEM2Q9UHN6 1383 aa21.26■□□□□ 0.99
GAPDH-209ENST00000492719 MROH1Q8NDA8 1641 aa21.26■□□□□ 0.99
GAPDH-209ENST00000492719 TET3O43151 1660 aa21.24■□□□□ 0.99
GAPDH-209ENST00000492719 FOXD1Q16676 465 aa21.24■□□□□ 0.99
GAPDH-209ENST00000492719 DIP2AQ14689 1571 aa21.23■□□□□ 0.99
GAPDH-209ENST00000492719 ATAD2Q6PL18 1390 aa21.23■□□□□ 0.99
GAPDH-209ENST00000492719 CAMSAP2Q08AD1 1489 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms