RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 C3P01024 1663 aa11.07□□□□□ -0.64
PDLIM1-204ENST00000492511 ANKRD30AQ9BXX3 1397 aa11.06□□□□□ -0.64
PDLIM1-204ENST00000492511 CROCC2H7BZ55 1655 aa11.06□□□□□ -0.64
PDLIM1-204ENST00000492511 WASHC2CQ9Y4E1 1318 aa11.06□□□□□ -0.64
PDLIM1-204ENST00000492511 ADGRL2O95490 1459 aa11.06□□□□□ -0.64
PDLIM1-204ENST00000492511 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.05□□□□□ -0.64
PDLIM1-204ENST00000492511 FBXO31Q5XUX0 539 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1-204ENST00000492511 CLTCQ00610 1675 aaKnown RBP11.04□□□□□ -0.64
PDLIM1-204ENST00000492511 NPATQ14207 1427 aa11.04□□□□□ -0.64
PDLIM1-204ENST00000492511 ERBINQ96RT1 1412 aa11.04□□□□□ -0.64
PDLIM1-204ENST00000492511 MROH2AA6NES4 1674 aa11.04□□□□□ -0.64
PDLIM1-204ENST00000492511 RRBP1Q9P2E9 1410 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-204ENST00000492511 MROH1Q8NDA8 1641 aa11.03□□□□□ -0.64
PDLIM1-204ENST00000492511 RNF17Q9BXT8 1623 aaKnown RBP11.03□□□□□ -0.64
PDLIM1-204ENST00000492511 PREX1Q8TCU6 1659 aa11.03□□□□□ -0.64
PDLIM1-204ENST00000492511 EIF2AK4Q9P2K8 1649 aaKnown RBP11.02□□□□□ -0.64
PDLIM1-204ENST00000492511 ITGAEP38570 1179 aa11.02□□□□□ -0.65
PDLIM1-204ENST00000492511 KDM5DQ9BY66 1539 aa11.02□□□□□ -0.65
PDLIM1-204ENST00000492511 UHRF1BP1Q6BDS2 1440 aa11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 ABCC3O15438 1527 aa11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 FAM135AQ9P2D6 1515 aa11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 CERKQ8TCT0 537 aa11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 ROCK1Q13464 1354 aa11.01□□□□□ -0.65
PDLIM1-204ENST00000492511 PZPP20742 1482 aa11□□□□□ -0.65
PDLIM1-204ENST00000492511 DMRT2Q9Y5R5 561 aa11□□□□□ -0.65
PDLIM1-204ENST00000492511 ANKRD50Q9ULJ7 1429 aa11□□□□□ -0.65
PDLIM1-204ENST00000492511 SETD1BQ9UPS6 1966 aaKnown RBP10.98□□□□□ -0.65
PDLIM1-204ENST00000492511 PRDM15P57071 1507 aaPredicted RBP10.98□□□□□ -0.65
PDLIM1-204ENST00000492511 TNRQ92752 1358 aa10.97□□□□□ -0.65
PDLIM1-204ENST00000492511 DEPDC5O75140 1603 aa10.97□□□□□ -0.65
PDLIM1-204ENST00000492511 VWDEQ8N2E2 1590 aa10.96□□□□□ -0.65
PDLIM1-204ENST00000492511 ARHGAP31Q2M1Z3 1444 aa10.96□□□□□ -0.65
PDLIM1-204ENST00000492511 LMTK2Q8IWU2 1503 aa10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 ERVK-7P63135 1459 aa10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 KANK1Q14678 1352 aa10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 ZC3H13Q5T200 1668 aaKnown RBP10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 MYO3AQ8NEV4 1616 aa10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 SPATA31D1Q6ZQQ2 1576 aa10.94□□□□□ -0.66
PDLIM1-204ENST00000492511 A2ML1A8K2U0 1454 aa10.93□□□□□ -0.66
PDLIM1-204ENST00000492511 CEP152O94986 1710 aa10.93□□□□□ -0.66
PDLIM1-204ENST00000492511 NCKAP5LQ9HCH0 1330 aa10.93□□□□□ -0.66
PDLIM1-204ENST00000492511 CEP170BQ9Y4F5 1589 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1-204ENST00000492511 STRCQ7RTU9 1775 aa10.93□□□□□ -0.66
PDLIM1-204ENST00000492511 DISP3Q9P2K9 1392 aa10.92□□□□□ -0.66
PDLIM1-204ENST00000492511 CAMSAP1Q5T5Y3 1602 aa10.92□□□□□ -0.66
PDLIM1-204ENST00000492511 NAIPQ13075 1403 aa10.92□□□□□ -0.66
PDLIM1-204ENST00000492511 NLRP1Q9C000 1473 aa10.91□□□□□ -0.66
PDLIM1-204ENST00000492511 ZNF142P52746 1687 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1-204ENST00000492511 NOS1P29475 1434 aa10.9□□□□□ -0.66
PDLIM1-204ENST00000492511 NUP155O75694 1391 aa10.9□□□□□ -0.67
PDLIM1-204ENST00000492511 PLA2R1Q13018 1463 aa10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 IDI1Q13907 227 aa10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 THEMISQ8N1K5 641 aaPredicted RBP10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 PTPRTO14522 1441 aa10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 UNC13BO14795 1591 aa10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 EFCAB6Q5THR3 1501 aa10.89□□□□□ -0.67
PDLIM1-204ENST00000492511 HFM1A2PYH4 1435 aa10.88□□□□□ -0.67
PDLIM1-204ENST00000492511 PKD2Q13563 968 aa10.88□□□□□ -0.67
PDLIM1-204ENST00000492511 UGGT1Q9NYU2 1555 aa10.87□□□□□ -0.67
PDLIM1-204ENST00000492511 SOCS7O14512 581 aa10.86□□□□□ -0.67
PDLIM1-204ENST00000492511 IQSEC2Q5JU85 1478 aa10.86□□□□□ -0.67
PDLIM1-204ENST00000492511 RPRD2Q5VT52 1461 aaKnown RBP10.86□□□□□ -0.67
PDLIM1-204ENST00000492511 SYNMO15061 1565 aa10.86□□□□□ -0.67
PDLIM1-204ENST00000492511 ANKLE2Q86XL3 938 aa10.85□□□□□ -0.67
PDLIM1-204ENST00000492511 IQGAP3Q86VI3 1631 aa10.84□□□□□ -0.67
PDLIM1-204ENST00000492511 LTKP29376 864 aa10.84□□□□□ -0.67
PDLIM1-204ENST00000492511 SLC52A1Q9NWF4 448 aa10.84□□□□□ -0.67
PDLIM1-204ENST00000492511 TET3O43151 1660 aa10.84□□□□□ -0.67
PDLIM1-204ENST00000492511 CFAP65Q6ZU64 1925 aaKnown RBP10.83□□□□□ -0.68
PDLIM1-204ENST00000492511 NEURL4Q96JN8 1562 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 MED14O60244 1454 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 ARHGAP23Q9P227 1491 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 PIK3C2BO00750 1634 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 E9PCH4 1651 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 GCC2Q8IWJ2 1684 aa10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 ZNF335Q9H4Z2 1342 aaPredicted RBP10.82□□□□□ -0.68
PDLIM1-204ENST00000492511 UBR1Q8IWV7 1749 aa10.81□□□□□ -0.68
PDLIM1-204ENST00000492511 TMEM2Q9UHN6 1383 aa10.81□□□□□ -0.68
PDLIM1-204ENST00000492511 SLIT1O75093 1534 aa10.81□□□□□ -0.68
PDLIM1-204ENST00000492511 TXNDC2Q86VQ3 553 aa10.81□□□□□ -0.68
PDLIM1-204ENST00000492511 TRIM52Q96A61 297 aa10.81□□□□□ -0.68
PDLIM1-204ENST00000492511 LTBP4Q8N2S1 1624 aa10.8□□□□□ -0.68
PDLIM1-204ENST00000492511 STAG3Q9UJ98 1225 aa10.8□□□□□ -0.68
PDLIM1-204ENST00000492511 NPHP4O75161 1426 aaPredicted RBP10.8□□□□□ -0.68
PDLIM1-204ENST00000492511 ILDR2Q71H61 639 aa10.79□□□□□ -0.68
PDLIM1-204ENST00000492511 SETD5Q9C0A6 1442 aa10.78□□□□□ -0.68
PDLIM1-204ENST00000492511 SLC4A1APQ9BWU0 796 aaKnown RBP10.78□□□□□ -0.68
PDLIM1-204ENST00000492511 SCAF11Q99590 1463 aaKnown RBP10.78□□□□□ -0.68
PDLIM1-204ENST00000492511 ADGRB3O60242 1522 aa10.78□□□□□ -0.68
PDLIM1-204ENST00000492511 EID1Q9Y6B2 187 aa10.77□□□□□ -0.69
PDLIM1-204ENST00000492511 ZFYVE9O95405 1425 aa10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 CHGAP10645 457 aaKnown RBP10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 FOXD1Q16676 465 aa10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 MPHOSPH9Q99550 1183 aa10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 TMEM131LA2VDJ0 1609 aa10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 KDM5AP29375 1690 aaKnown RBP10.76□□□□□ -0.69
PDLIM1-204ENST00000492511 POLR1AO95602 1720 aaPredicted RBP10.75□□□□□ -0.69
PDLIM1-204ENST00000492511 RAB3GAP2Q9H2M9 1393 aa10.75□□□□□ -0.69
PDLIM1-204ENST00000492511 RIMS2Q9UQ26 1411 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms