RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 CNTLNQ9NXG0 1405 aa39.44■■■■□ 3.9
TTC3-223ENST00000492275 ITGAEP38570 1179 aa39.43■■■■□ 3.9
TTC3-223ENST00000492275 CLTCQ00610 1675 aaKnown RBP39.43■■■■□ 3.9
TTC3-223ENST00000492275 C3P01024 1663 aa39.41■■■■□ 3.9
TTC3-223ENST00000492275 RNF17Q9BXT8 1623 aaKnown RBP39.4■■■■□ 3.9
TTC3-223ENST00000492275 ERBINQ96RT1 1412 aa39.4■■■■□ 3.9
TTC3-223ENST00000492275 MROH2AA6NES4 1674 aa39.39■■■■□ 3.9
TTC3-223ENST00000492275 ZMYM3Q14202 1370 aa39.35■■■■□ 3.89
TTC3-223ENST00000492275 ROCK1Q13464 1354 aa39.33■■■■□ 3.89
TTC3-223ENST00000492275 MROH1Q8NDA8 1641 aa39.32■■■■□ 3.89
TTC3-223ENST00000492275 KDM5DQ9BY66 1539 aa39.29■■■■□ 3.88
TTC3-223ENST00000492275 WASHC2CQ9Y4E1 1318 aa39.28■■■■□ 3.88
TTC3-223ENST00000492275 FAM135AQ9P2D6 1515 aa39.28■■■■□ 3.88
TTC3-223ENST00000492275 SETD1BQ9UPS6 1966 aaKnown RBP39.27■■■■□ 3.88
TTC3-223ENST00000492275 ANKRD50Q9ULJ7 1429 aa39.25■■■■□ 3.87
TTC3-223ENST00000492275 DEPDC5O75140 1603 aa39.24■■■■□ 3.87
TTC3-223ENST00000492275 ABCC3O15438 1527 aa39.2■■■■□ 3.87
TTC3-223ENST00000492275 PRDM15P57071 1507 aaPredicted RBP39.2■■■■□ 3.87
TTC3-223ENST00000492275 ZC3H13Q5T200 1668 aaKnown RBP39.19■■■■□ 3.86
TTC3-223ENST00000492275 CEP152O94986 1710 aa39.18■■■■□ 3.86
TTC3-223ENST00000492275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.18■■■■□ 3.865e-7■■□□□ 12.6
TTC3-223ENST00000492275 LMTK3Q96Q04 1460 aa39.17■■■■□ 3.86
TTC3-223ENST00000492275 PREX1Q8TCU6 1659 aa39.15■■■■□ 3.86
TTC3-223ENST00000492275 NPATQ14207 1427 aa39.14■■■■□ 3.86
TTC3-223ENST00000492275 VWDEQ8N2E2 1590 aa39.1■■■■□ 3.85
TTC3-223ENST00000492275 PZPP20742 1482 aa39.1■■■■□ 3.85
TTC3-223ENST00000492275 FBXO31Q5XUX0 539 aaPredicted RBP39.09■■■■□ 3.85
TTC3-223ENST00000492275 CAMSAP1Q5T5Y3 1602 aa39.08■■■■□ 3.85
TTC3-223ENST00000492275 KANK1Q14678 1352 aa39.08■■■■□ 3.85
TTC3-223ENST00000492275 CFAP65Q6ZU64 1925 aaKnown RBP39.04■■■■□ 3.84
TTC3-223ENST00000492275 NAIPQ13075 1403 aa39.04■■■■□ 3.84
TTC3-223ENST00000492275 UHRF1BP1Q6BDS2 1440 aa39.04■■■■□ 3.84
TTC3-223ENST00000492275 UNC13BO14795 1591 aa39.03■■■■□ 3.84
TTC3-223ENST00000492275 LMTK2Q8IWU2 1503 aa39.01■■■■□ 3.84
TTC3-223ENST00000492275 HSPA2P54652 639 aa39.01■■■■□ 3.84
TTC3-223ENST00000492275 GCC2Q8IWJ2 1684 aa39■■■■□ 3.83
TTC3-223ENST00000492275 ARHGAP31Q2M1Z3 1444 aa38.97■■■■□ 3.83
TTC3-223ENST00000492275 HFM1A2PYH4 1435 aa38.96■■■■□ 3.83
TTC3-223ENST00000492275 MYO3AQ8NEV4 1616 aa38.95■■■■□ 3.83
TTC3-223ENST00000492275 TNRQ92752 1358 aa38.95■■■■□ 3.83
TTC3-223ENST00000492275 SPATA31D1Q6ZQQ2 1576 aa38.91■■■■□ 3.82
TTC3-223ENST00000492275 ERVK-7P63135 1459 aa38.91■■■■□ 3.82
TTC3-223ENST00000492275 EFCAB6Q5THR3 1501 aa38.88■■■■□ 3.81
TTC3-223ENST00000492275 IQGAP3Q86VI3 1631 aa38.87■■■■□ 3.81
TTC3-223ENST00000492275 ZNF142P52746 1687 aaPredicted RBP38.87■■■■□ 3.81
TTC3-223ENST00000492275 NUP155O75694 1391 aa38.86■■■■□ 3.81
TTC3-223ENST00000492275 TET3O43151 1660 aa38.86■■■■□ 3.81
TTC3-223ENST00000492275 CEP170BQ9Y4F5 1589 aaPredicted RBP38.85■■■■□ 3.81
TTC3-223ENST00000492275 A2ML1A8K2U0 1454 aa38.81■■■■□ 3.8
TTC3-223ENST00000492275 NLRP1Q9C000 1473 aa38.78■■■■□ 3.8
TTC3-223ENST00000492275 STRCQ7RTU9 1775 aa38.75■■■■□ 3.79
TTC3-223ENST00000492275 RPRD2Q5VT52 1461 aaKnown RBP38.75■■■■□ 3.79
TTC3-223ENST00000492275 E9PCH4 1651 aa38.74■■■■□ 3.79
TTC3-223ENST00000492275 NOS1P29475 1434 aa38.73■■■■□ 3.79
TTC3-223ENST00000492275 SYNMO15061 1565 aa38.7■■■■□ 3.79
TTC3-223ENST00000492275 TRIM52Q96A61 297 aa38.67■■■■□ 3.78
TTC3-223ENST00000492275 UGGT1Q9NYU2 1555 aa38.65■■■■□ 3.78
TTC3-223ENST00000492275 SETD5Q9C0A6 1442 aa38.65■■■■□ 3.78
TTC3-223ENST00000492275 IDI1Q13907 227 aa38.62■■■■□ 3.77
TTC3-223ENST00000492275 PLA2R1Q13018 1463 aa38.61■■■■□ 3.77
TTC3-223ENST00000492275 UBR1Q8IWV7 1749 aa38.61■■■■□ 3.77
TTC3-223ENST00000492275 THEMISQ8N1K5 641 aaPredicted RBP38.6■■■■□ 3.77
TTC3-223ENST00000492275 PIK3C2BO00750 1634 aa38.6■■■■□ 3.77
TTC3-223ENST00000492275 NCKAP5LQ9HCH0 1330 aa38.58■■■■□ 3.77
TTC3-223ENST00000492275 SLC52A1Q9NWF4 448 aa38.56■■■■□ 3.76
TTC3-223ENST00000492275 RAB3GAP2Q9H2M9 1393 aa38.53■■■■□ 3.76
TTC3-223ENST00000492275 PKD2Q13563 968 aa38.51■■■■□ 3.76
TTC3-223ENST00000492275 SLC4A1APQ9BWU0 796 aaKnown RBP38.51■■■■□ 3.76
TTC3-223ENST00000492275 DMRT2Q9Y5R5 561 aa38.51■■■■□ 3.76
TTC3-223ENST00000492275 SPHKAPQ2M3C7 1700 aa38.49■■■■□ 3.75
TTC3-223ENST00000492275 KDM5AP29375 1690 aaKnown RBP38.49■■■■□ 3.75
TTC3-223ENST00000492275 PTPRTO14522 1441 aa38.48■■■■□ 3.75
TTC3-223ENST00000492275 POLR1AO95602 1720 aaPredicted RBP38.46■■■■□ 3.75
TTC3-223ENST00000492275 STAG3Q9UJ98 1225 aa38.45■■■■□ 3.75
TTC3-223ENST00000492275 ACIN1Q9UKV3 1341 aaKnown RBP38.44■■■■□ 3.74
TTC3-223ENST00000492275 ANKLE2Q86XL3 938 aa38.44■■■■□ 3.74
TTC3-223ENST00000492275 MPHOSPH9Q99550 1183 aa38.43■■■■□ 3.74
TTC3-223ENST00000492275 ADGRB3O60242 1522 aa38.43■■■■□ 3.74
TTC3-223ENST00000492275 MYO5BQ9ULV0 1848 aa38.42■■■■□ 3.74
TTC3-223ENST00000492275 ARHGAP23Q9P227 1491 aa38.41■■■■□ 3.74
TTC3-223ENST00000492275 NEURL4Q96JN8 1562 aa38.41■■■■□ 3.74
TTC3-223ENST00000492275 SLIT1O75093 1534 aa38.4■■■■□ 3.74
TTC3-223ENST00000492275 TMEM131LA2VDJ0 1609 aa38.39■■■■□ 3.74
TTC3-223ENST00000492275 HRCP23327 699 aa38.37■■■■□ 3.73
TTC3-223ENST00000492275 TMEM2Q9UHN6 1383 aa38.36■■■■□ 3.73
TTC3-223ENST00000492275 FOXD1Q16676 465 aa38.36■■■■□ 3.73
TTC3-223ENST00000492275 TRPM2O94759 1503 aa38.34■■■■□ 3.73
TTC3-223ENST00000492275 LTKP29376 864 aa38.34■■■■□ 3.73
TTC3-223ENST00000492275 MED14O60244 1454 aa38.33■■■■□ 3.73
TTC3-223ENST00000492275 TXNDC2Q86VQ3 553 aa38.32■■■■□ 3.72
TTC3-223ENST00000492275 CLTCL1P53675 1640 aa38.31■■■■□ 3.72
TTC3-223ENST00000492275 CHGAP10645 457 aaKnown RBP38.31■■■■□ 3.72
TTC3-223ENST00000492275 SCAF11Q99590 1463 aaKnown RBP38.29■■■■□ 3.72
TTC3-223ENST00000492275 NPHP4O75161 1426 aaPredicted RBP38.29■■■■□ 3.72
TTC3-223ENST00000492275 EID1Q9Y6B2 187 aa38.27■■■■□ 3.72
TTC3-223ENST00000492275 IQGAP1P46940 1657 aa38.24■■■■□ 3.71
TTC3-223ENST00000492275 TRIM26Q12899 539 aaPredicted RBP38.23■■■■□ 3.71
TTC3-223ENST00000492275 ZFYVE9O95405 1425 aa38.21■■■■□ 3.71
TTC3-223ENST00000492275 KIF1BO60333 1816 aa38.21■■■■□ 3.71
TTC3-223ENST00000492275 RIMS2Q9UQ26 1411 aa38.2■■■■□ 3.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms