RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ASXL2Q76L83 1435 aa25.98■■□□□ 1.75
SNAPC3-206ENST00000490969 ANKRD30AQ9BXX3 1397 aa25.98■■□□□ 1.75
SNAPC3-206ENST00000490969 TSPY4P0CV99 314 aa25.97■■□□□ 1.75
SNAPC3-206ENST00000490969 TSPY10P0CW01 314 aa25.97■■□□□ 1.75
SNAPC3-206ENST00000490969 ANO8Q9HCE9 1232 aaPredicted RBP25.97■■□□□ 1.75
SNAPC3-206ENST00000490969 ARHGEF5Q12774 1597 aa25.96■■□□□ 1.75
SNAPC3-206ENST00000490969 CCDC141Q6ZP82 1450 aa25.94■■□□□ 1.74
SNAPC3-206ENST00000490969 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
SNAPC3-206ENST00000490969 ANKRD50Q9ULJ7 1429 aa25.92■■□□□ 1.74
SNAPC3-206ENST00000490969 CNGB1Q14028 1251 aaPredicted RBP25.91■■□□□ 1.74
SNAPC3-206ENST00000490969 EFCAB2Q5VUJ9 269 aa25.9■■□□□ 1.74
SNAPC3-206ENST00000490969 KIF15Q9NS87 1388 aa25.9■■□□□ 1.74
SNAPC3-206ENST00000490969 CYB5RLQ6IPT4 315 aa25.89■■□□□ 1.73
SNAPC3-206ENST00000490969 IL27Q8NEV9 243 aa25.88■■□□□ 1.73
SNAPC3-206ENST00000490969 SLC4A1APQ9BWU0 796 aaKnown RBP25.88■■□□□ 1.73
SNAPC3-206ENST00000490969 PZPP20742 1482 aa25.88■■□□□ 1.73
SNAPC3-206ENST00000490969 PNISRQ8TF01 805 aaKnown RBP25.87■■□□□ 1.73
SNAPC3-206ENST00000490969 TRAPPC8Q9Y2L5 1435 aa25.87■■□□□ 1.73
SNAPC3-206ENST00000490969 SALL2Q9Y467 1007 aaPredicted RBP25.86■■□□□ 1.73
SNAPC3-206ENST00000490969 NPM1P06748 294 aaKnown RBP eCLIP25.86■■□□□ 1.73
SNAPC3-206ENST00000490969 KIAA1107Q9UPP5 1409 aa25.86■■□□□ 1.73
SNAPC3-206ENST00000490969 SENP3-EIF4A1A0A087X0R7 540 aa25.85■■□□□ 1.73
SNAPC3-206ENST00000490969 BCORL1Q5H9F3 1711 aa25.85■■□□□ 1.73
SNAPC3-206ENST00000490969 NPM2Q86SE8 214 aaKnown RBP25.85■■□□□ 1.73
SNAPC3-206ENST00000490969 AFAP1Q8N556 730 aa25.84■■□□□ 1.73
SNAPC3-206ENST00000490969 TCERG1O14776 1098 aaKnown RBP25.83■■□□□ 1.73
SNAPC3-206ENST00000490969 POLR3GLQ9BT43 218 aa25.83■■□□□ 1.73
SNAPC3-206ENST00000490969 ABCA9Q8IUA7 1624 aa25.83■■□□□ 1.73
SNAPC3-206ENST00000490969 ABCC1P33527 1531 aa25.82■■□□□ 1.72
SNAPC3-206ENST00000490969 RSPH4AQ5TD94 716 aa25.82■■□□□ 1.72
SNAPC3-206ENST00000490969 USP35Q9P2H5 1018 aa25.82■■□□□ 1.72
SNAPC3-206ENST00000490969 USP47Q96K76 1375 aa25.81■■□□□ 1.72
SNAPC3-206ENST00000490969 TMC1Q8TDI8 760 aa25.8■■□□□ 1.72
SNAPC3-206ENST00000490969 NEFMP07197 916 aa25.8■■□□□ 1.72
SNAPC3-206ENST00000490969 RRP1P56182 461 aaKnown RBP25.79■■□□□ 1.72
SNAPC3-206ENST00000490969 LAS1LQ9Y4W2 734 aaKnown RBP25.79■■□□□ 1.72
SNAPC3-206ENST00000490969 PLEKHH2Q8IVE3 1493 aa25.79■■□□□ 1.72
SNAPC3-206ENST00000490969 RIMBP3CA6NJZ7 1639 aa25.78■■□□□ 1.72
SNAPC3-206ENST00000490969 RIMBP3BA6NNM3 1639 aa25.78■■□□□ 1.72
SNAPC3-206ENST00000490969 RIMBP3Q9UFD9 1639 aa25.78■■□□□ 1.72
SNAPC3-206ENST00000490969 FANCAO15360 1455 aa25.78■■□□□ 1.72
SNAPC3-206ENST00000490969 ARID4BQ4LE39 1312 aaPredicted RBP25.78■■□□□ 1.72
SNAPC3-206ENST00000490969 PDE4AP27815 886 aa25.78■■□□□ 1.72
SNAPC3-206ENST00000490969 NUP155O75694 1391 aa25.78■■□□□ 1.72
SNAPC3-206ENST00000490969 EXOC6Q8TAG9 804 aa25.77■■□□□ 1.72
SNAPC3-206ENST00000490969 PKD2Q13563 968 aa25.76■■□□□ 1.71
SNAPC3-206ENST00000490969 LRPPRCP42704 1394 aaKnown RBP25.76■■□□□ 1.71
SNAPC3-206ENST00000490969 RTN4Q9NQC3 1192 aaKnown RBP25.75■■□□□ 1.71
SNAPC3-206ENST00000490969 MAST1Q9Y2H9 1570 aa25.75■■□□□ 1.71
SNAPC3-206ENST00000490969 BACH2Q9BYV9 841 aa25.74■■□□□ 1.71
SNAPC3-206ENST00000490969 KDM5CP41229 1560 aa25.73■■□□□ 1.71
SNAPC3-206ENST00000490969 ARAP3Q8WWN8 1544 aa25.73■■□□□ 1.71
SNAPC3-206ENST00000490969 ROCK2O75116 1388 aaKnown RBP25.72■■□□□ 1.71
SNAPC3-206ENST00000490969 MS4A1P11836 297 aa25.72■■□□□ 1.71
SNAPC3-206ENST00000490969 WASHC2CQ9Y4E1 1318 aa25.71■■□□□ 1.71
SNAPC3-206ENST00000490969 PPM1GO15355 546 aaPredicted RBP25.71■■□□□ 1.71
SNAPC3-206ENST00000490969 ZNF326Q5BKZ1 582 aaKnown RBP25.69■■□□□ 1.7
SNAPC3-206ENST00000490969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.69■■□□□ 1.74e-6■■■□□ 16.3
SNAPC3-206ENST00000490969 RCAN3Q9UKA8 241 aa25.69■■□□□ 1.7
SNAPC3-206ENST00000490969 SCAPERQ9BY12 1400 aa25.68■■□□□ 1.7
SNAPC3-206ENST00000490969 SPAG9O60271 1321 aaKnown RBP25.67■■□□□ 1.7
SNAPC3-206ENST00000490969 BRD4O60885 1362 aaPredicted RBP25.67■■□□□ 1.7
SNAPC3-206ENST00000490969 PLXNC1O60486 1568 aa25.67■■□□□ 1.7
SNAPC3-206ENST00000490969 ADGRL1O94910 1474 aa25.67■■□□□ 1.7
SNAPC3-206ENST00000490969 CD109Q6YHK3 1445 aa25.66■■□□□ 1.7
SNAPC3-206ENST00000490969 MYBBP1AQ9BQG0 1328 aaKnown RBP25.64■■□□□ 1.7
SNAPC3-206ENST00000490969 ZFYVE16Q7Z3T8 1539 aa25.62■■□□□ 1.69
SNAPC3-206ENST00000490969 KDM5DQ9BY66 1539 aa25.62■■□□□ 1.69
SNAPC3-206ENST00000490969 KTN1Q86UP2 1357 aaKnown RBP25.62■■□□□ 1.69
SNAPC3-206ENST00000490969 FAM135AQ9P2D6 1515 aa25.6■■□□□ 1.69
SNAPC3-206ENST00000490969 DUOX2Q9NRD8 1548 aa25.6■■□□□ 1.69
SNAPC3-206ENST00000490969 RALBP1Q15311 655 aa25.6■■□□□ 1.69
SNAPC3-206ENST00000490969 RALGAPBQ86X10 1494 aa25.57■■□□□ 1.68
SNAPC3-206ENST00000490969 PDE3BQ13370 1112 aa25.57■■□□□ 1.68
SNAPC3-206ENST00000490969 DDRGK1Q96HY6 314 aa25.57■■□□□ 1.68
SNAPC3-206ENST00000490969 UHRF1BP1Q6BDS2 1440 aa25.56■■□□□ 1.68
SNAPC3-206ENST00000490969 UNC13BO14795 1591 aa25.55■■□□□ 1.68
SNAPC3-206ENST00000490969 ATP7AQ04656 1500 aa25.55■■□□□ 1.68
SNAPC3-206ENST00000490969 RTEL1-TNFRSF6BF6WH68 1400 aa25.54■■□□□ 1.68
SNAPC3-206ENST00000490969 INO80Q9ULG1 1556 aaPredicted RBP25.54■■□□□ 1.68
SNAPC3-206ENST00000490969 CARD11Q9BXL7 1154 aa25.54■■□□□ 1.68
SNAPC3-206ENST00000490969 ERBINQ96RT1 1412 aa25.53■■□□□ 1.68
SNAPC3-206ENST00000490969 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.53■■□□□ 1.68
SNAPC3-206ENST00000490969 E9PCH4 1651 aa25.51■■□□□ 1.67
SNAPC3-206ENST00000490969 GSE1Q14687 1217 aa25.51■■□□□ 1.67
SNAPC3-206ENST00000490969 RAPGEF3O95398 923 aa25.51■■□□□ 1.67
SNAPC3-206ENST00000490969 BRPF3Q9ULD4 1205 aa25.49■■□□□ 1.67
SNAPC3-206ENST00000490969 KIDINS220Q9ULH0 1771 aa25.49■■□□□ 1.67
SNAPC3-206ENST00000490969 ST20-MTHFSA0A0A6YYL1 179 aa25.47■■□□□ 1.67
SNAPC3-206ENST00000490969 NLRP13Q86W25 1043 aa25.47■■□□□ 1.67
SNAPC3-206ENST00000490969 PLA2R1Q13018 1463 aa25.47■■□□□ 1.67
SNAPC3-206ENST00000490969 MAGI2Q86UL8 1455 aa25.46■■□□□ 1.67
SNAPC3-206ENST00000490969 IQGAP3Q86VI3 1631 aa25.46■■□□□ 1.67
SNAPC3-206ENST00000490969 CDCA7LQ96GN5 454 aa25.46■■□□□ 1.67
SNAPC3-206ENST00000490969 FAM69CQ0P6D2 419 aa25.45■■□□□ 1.67
SNAPC3-206ENST00000490969 NFKBIBQ15653 356 aa25.45■■□□□ 1.67
SNAPC3-206ENST00000490969 SKAP1Q86WV1 359 aa25.45■■□□□ 1.66
SNAPC3-206ENST00000490969 PLIN1O60240 522 aa25.44■■□□□ 1.66
SNAPC3-206ENST00000490969 ZNF518AQ6AHZ1 1483 aa25.44■■□□□ 1.66
SNAPC3-206ENST00000490969 POGZQ7Z3K3 1410 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms