RNA–Protein interactions for RNA: ENST00000490903.5

CKAP2-207, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKAP2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-207ENST00000490903 RTEL1-TNFRSF6BF6WH68 1400 aa8.39□□□□□ -1.07
CKAP2-207ENST00000490903 INO80Q9ULG1 1556 aaPredicted RBP8.38□□□□□ -1.07
CKAP2-207ENST00000490903 PTPRKQ15262 1439 aa8.38□□□□□ -1.07
CKAP2-207ENST00000490903 UBAP1LF5GYI3 381 aa8.38□□□□□ -1.07
CKAP2-207ENST00000490903 CAMSAP1Q5T5Y3 1602 aa8.38□□□□□ -1.07
CKAP2-207ENST00000490903 TNRQ92752 1358 aa8.38□□□□□ -1.07
CKAP2-207ENST00000490903 ITGAEP38570 1179 aa8.38□□□□□ -1.07
CKAP2-207ENST00000490903 NPATQ14207 1427 aa8.37□□□□□ -1.07
CKAP2-207ENST00000490903 PKD2Q13563 968 aa8.37□□□□□ -1.07
CKAP2-207ENST00000490903 STRCQ7RTU9 1775 aa8.37□□□□□ -1.07
CKAP2-207ENST00000490903 THEMISQ8N1K5 641 aaPredicted RBP8.37□□□□□ -1.07
CKAP2-207ENST00000490903 STAG3Q9UJ98 1225 aa8.37□□□□□ -1.07
CKAP2-207ENST00000490903 NCOA1Q15788 1441 aa8.37□□□□□ -1.07
CKAP2-207ENST00000490903 MYOM3Q5VTT5 1437 aa8.37□□□□□ -1.07
CKAP2-207ENST00000490903 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.37□□□□□ -1.07
CKAP2-207ENST00000490903 ANKLE2Q86XL3 938 aa8.36□□□□□ -1.07
CKAP2-207ENST00000490903 PIP4K2BP78356 416 aa8.36□□□□□ -1.07
CKAP2-207ENST00000490903 PTPRTO14522 1441 aa8.36□□□□□ -1.07
CKAP2-207ENST00000490903 ADGBQ8N7X0 1667 aa8.35□□□□□ -1.07
CKAP2-207ENST00000490903 PLXNC1O60486 1568 aa8.35□□□□□ -1.07
CKAP2-207ENST00000490903 CFAP65Q6ZU64 1925 aaKnown RBP8.34□□□□□ -1.07
CKAP2-207ENST00000490903 KIF15Q9NS87 1388 aa8.34□□□□□ -1.07
CKAP2-207ENST00000490903 DISP3Q9P2K9 1392 aa8.34□□□□□ -1.07
CKAP2-207ENST00000490903 MIA2Q96PC5 1412 aa8.34□□□□□ -1.08
CKAP2-207ENST00000490903 BCANQ96GW7 911 aa8.33□□□□□ -1.08
CKAP2-207ENST00000490903 CEP170BQ9Y4F5 1589 aaPredicted RBP8.32□□□□□ -1.08
CKAP2-207ENST00000490903 A2ML1A8K2U0 1454 aa8.32□□□□□ -1.08
CKAP2-207ENST00000490903 MROH2AA6NES4 1674 aa8.32□□□□□ -1.08
CKAP2-207ENST00000490903 ABCC5O15440 1437 aa8.32□□□□□ -1.08
CKAP2-207ENST00000490903 TXNDC2Q86VQ3 553 aa8.31□□□□□ -1.08
CKAP2-207ENST00000490903 KDM5DQ9BY66 1539 aa8.31□□□□□ -1.08
CKAP2-207ENST00000490903 ARHGEF5Q12774 1597 aa8.31□□□□□ -1.08
CKAP2-207ENST00000490903 PZPP20742 1482 aa8.3□□□□□ -1.08
CKAP2-207ENST00000490903 CHGAP10645 457 aaKnown RBP8.3□□□□□ -1.08
CKAP2-207ENST00000490903 MYO3AQ8NEV4 1616 aa8.3□□□□□ -1.08
CKAP2-207ENST00000490903 KANK1Q14678 1352 aa8.3□□□□□ -1.08
CKAP2-207ENST00000490903 FGD6Q6ZV73 1430 aa8.3□□□□□ -1.08
CKAP2-207ENST00000490903 MAP3K1Q13233 1512 aa8.3□□□□□ -1.08
CKAP2-207ENST00000490903 ANKRD30AQ9BXX3 1397 aa8.3□□□□□ -1.08
CKAP2-207ENST00000490903 FAM135AQ9P2D6 1515 aa8.3□□□□□ -1.08
CKAP2-207ENST00000490903 EID1Q9Y6B2 187 aa8.29□□□□□ -1.08
CKAP2-207ENST00000490903 TOM1O60784 492 aa8.29□□□□□ -1.08
CKAP2-207ENST00000490903 DAPK1P53355 1430 aa8.29□□□□□ -1.08
CKAP2-207ENST00000490903 DNMT1P26358 1616 aaKnown RBP8.28□□□□□ -1.08
CKAP2-207ENST00000490903 PTPN23Q9H3S7 1636 aa8.28□□□□□ -1.08
CKAP2-207ENST00000490903 UGGT1Q9NYU2 1555 aa8.28□□□□□ -1.08
CKAP2-207ENST00000490903 PLA2R1Q13018 1463 aa8.28□□□□□ -1.08
CKAP2-207ENST00000490903 LTBP4Q8N2S1 1624 aa8.28□□□□□ -1.08
CKAP2-207ENST00000490903 TCOF1Q13428 1488 aaKnown RBP8.28□□□□□ -1.08
CKAP2-207ENST00000490903 LTKP29376 864 aa8.28□□□□□ -1.08
CKAP2-207ENST00000490903 IDI1Q13907 227 aa8.27□□□□□ -1.09
CKAP2-207ENST00000490903 ABCC3O15438 1527 aa8.27□□□□□ -1.09
CKAP2-207ENST00000490903 DUOX2Q9NRD8 1548 aa8.27□□□□□ -1.09
CKAP2-207ENST00000490903 RBM33Q96EV2 1170 aaKnown RBP8.27□□□□□ -1.09
CKAP2-207ENST00000490903 NPHP4O75161 1426 aaPredicted RBP8.27□□□□□ -1.09
CKAP2-207ENST00000490903 SLC26A8Q96RN1 970 aa8.27□□□□□ -1.09
CKAP2-207ENST00000490903 ILDR2Q71H61 639 aa8.26□□□□□ -1.09
CKAP2-207ENST00000490903 NLRP1Q9C000 1473 aa8.26□□□□□ -1.09
CKAP2-207ENST00000490903 HSPA1LP34931 641 aa8.26□□□□□ -1.09
CKAP2-207ENST00000490903 NUTM2DQ5VT03 806 aaPredicted RBP8.26□□□□□ -1.09
CKAP2-207ENST00000490903 ERVK-7P63135 1459 aa8.26□□□□□ -1.09
CKAP2-207ENST00000490903 PPP1R15AO75807 674 aaPredicted RBP8.25□□□□□ -1.09
CKAP2-207ENST00000490903 MAST1Q9Y2H9 1570 aa8.25□□□□□ -1.09
CKAP2-207ENST00000490903 SHANK2Q9UPX8 1470 aa8.25□□□□□ -1.09
CKAP2-207ENST00000490903 CEP152O94986 1710 aa8.24□□□□□ -1.09
CKAP2-207ENST00000490903 ZNF142P52746 1687 aaPredicted RBP8.24□□□□□ -1.09
CKAP2-207ENST00000490903 ERBINQ96RT1 1412 aa8.23□□□□□ -1.09
CKAP2-207ENST00000490903 ANKRD50Q9ULJ7 1429 aa8.23□□□□□ -1.09
CKAP2-207ENST00000490903 PROSER2Q86WR7 435 aaPredicted RBP8.22□□□□□ -1.09
CKAP2-207ENST00000490903 RNF17Q9BXT8 1623 aaKnown RBP8.22□□□□□ -1.09
CKAP2-207ENST00000490903 SPATA31D1Q6ZQQ2 1576 aa8.21□□□□□ -1.1
CKAP2-207ENST00000490903 MROH1Q8NDA8 1641 aa8.21□□□□□ -1.1
CKAP2-207ENST00000490903 C14orf37Q86TY3 774 aa8.21□□□□□ -1.1
CKAP2-207ENST00000490903 SLC52A1Q9NWF4 448 aa8.21□□□□□ -1.1
CKAP2-207ENST00000490903 NEURL4Q96JN8 1562 aa8.21□□□□□ -1.1
CKAP2-207ENST00000490903 EIF2AK4Q9P2K8 1649 aaKnown RBP8.2□□□□□ -1.1
CKAP2-207ENST00000490903 SCAF11Q99590 1463 aaKnown RBP8.2□□□□□ -1.1
CKAP2-207ENST00000490903 NUP155O75694 1391 aa8.2□□□□□ -1.1
CKAP2-207ENST00000490903 TMEM2Q9UHN6 1383 aa8.2□□□□□ -1.1
CKAP2-207ENST00000490903 TRIM52Q96A61 297 aa8.2□□□□□ -1.1
CKAP2-207ENST00000490903 IQSEC2Q5JU85 1478 aa8.2□□□□□ -1.1
CKAP2-207ENST00000490903 HDGFP51858 240 aaKnown RBP8.19□□□□□ -1.1
CKAP2-207ENST00000490903 ZNF326Q5BKZ1 582 aaKnown RBP8.19□□□□□ -1.1
CKAP2-207ENST00000490903 ARHGAP31Q2M1Z3 1444 aa8.19□□□□□ -1.1
CKAP2-207ENST00000490903 POLR1AO95602 1720 aaPredicted RBP8.19□□□□□ -1.1
CKAP2-207ENST00000490903 ZC3H13Q5T200 1668 aaKnown RBP8.18□□□□□ -1.1
CKAP2-207ENST00000490903 CPS1P31327 1500 aa8.18□□□□□ -1.1
CKAP2-207ENST00000490903 CROCC2H7BZ55 1655 aa8.18□□□□□ -1.1
CKAP2-207ENST00000490903 PRDM15P57071 1507 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-207ENST00000490903 MED14O60244 1454 aa8.18□□□□□ -1.1
CKAP2-207ENST00000490903 KCNA6P17658 529 aa8.17□□□□□ -1.1
CKAP2-207ENST00000490903 IQGAP1P46940 1657 aa8.17□□□□□ -1.1
CKAP2-207ENST00000490903 VWDEQ8N2E2 1590 aa8.17□□□□□ -1.1
CKAP2-207ENST00000490903 SOCS7O14512 581 aa8.16□□□□□ -1.1
CKAP2-207ENST00000490903 PIK3C2BO00750 1634 aa8.16□□□□□ -1.1
CKAP2-207ENST00000490903 TMEM94Q12767 1356 aa8.16□□□□□ -1.1
CKAP2-207ENST00000490903 LRRC7Q96NW7 1537 aa8.16□□□□□ -1.1
CKAP2-207ENST00000490903 UBR1Q8IWV7 1749 aa8.16□□□□□ -1.1
CKAP2-207ENST00000490903 EFCAB6Q5THR3 1501 aa8.16□□□□□ -1.1
CKAP2-207ENST00000490903 ADGRL2O95490 1459 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms