RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 TIE1P35590 1138 aa11.92□□□□□ -0.5
PRPF4B-208ENST00000490653 PLCD3Q8N3E9 789 aa11.92□□□□□ -0.5
PRPF4B-208ENST00000490653 FMN1Q68DA7 1419 aa11.92□□□□□ -0.5
PRPF4B-208ENST00000490653 MAMSTRQ6ZN01 415 aa11.91□□□□□ -0.5
PRPF4B-208ENST00000490653 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
PRPF4B-208ENST00000490653 POGZQ7Z3K3 1410 aa11.91□□□□□ -0.5
PRPF4B-208ENST00000490653 ARHGEF12Q9NZN5 1544 aa11.91□□□□□ -0.5
PRPF4B-208ENST00000490653 LOC105371045A0A1W2PR82 267 aa11.9□□□□□ -0.5
PRPF4B-208ENST00000490653 PLCH2O75038 1416 aa11.9□□□□□ -0.5
PRPF4B-208ENST00000490653 CEBPAP49715 358 aaPredicted RBP11.9□□□□□ -0.5
PRPF4B-208ENST00000490653 MLECQ14165 292 aa11.9□□□□□ -0.5
PRPF4B-208ENST00000490653 ILDR2Q71H61 639 aa11.9□□□□□ -0.5
PRPF4B-208ENST00000490653 LRRIQ1Q96JM4 1722 aa11.9□□□□□ -0.5
PRPF4B-208ENST00000490653 SCAPERQ9BY12 1400 aa11.9□□□□□ -0.5
PRPF4B-208ENST00000490653 POTEFA5A3E0 1075 aa11.88□□□□□ -0.51
PRPF4B-208ENST00000490653 MAGI2Q86UL8 1455 aa11.88□□□□□ -0.51
PRPF4B-208ENST00000490653 POTEMA6NI47 508 aa11.87□□□□□ -0.51
PRPF4B-208ENST00000490653 ZBTB47Q9UFB7 747 aaPredicted RBP11.87□□□□□ -0.51
PRPF4B-208ENST00000490653 KIF14Q15058 1648 aa11.86□□□□□ -0.51
PRPF4B-208ENST00000490653 NUBP1P53384 320 aa11.86□□□□□ -0.51
PRPF4B-208ENST00000490653 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
PRPF4B-208ENST00000490653 PLSCR2Q9NRY7 297 aa11.86□□□□□ -0.51
PRPF4B-208ENST00000490653 CDK11AQ9UQ88 783 aaPredicted RBP11.86□□□□□ -0.51
PRPF4B-208ENST00000490653 CLIP1P30622 1438 aa11.86□□□□□ -0.51
PRPF4B-208ENST00000490653 ATP10AO60312 1499 aa11.85□□□□□ -0.51
PRPF4B-208ENST00000490653 TROQ12816 1431 aaPredicted RBP11.85□□□□□ -0.51
PRPF4B-208ENST00000490653 CASKIN1Q8WXD9 1431 aa11.85□□□□□ -0.51
PRPF4B-208ENST00000490653 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
PRPF4B-208ENST00000490653 EFCAB2Q5VUJ9 269 aa11.84□□□□□ -0.51
PRPF4B-208ENST00000490653 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
PRPF4B-208ENST00000490653 CFAP74Q9C0B2 1584 aa11.84□□□□□ -0.51
PRPF4B-208ENST00000490653 POTEGQ6S5H5 508 aa11.83□□□□□ -0.52
PRPF4B-208ENST00000490653 AFAP1Q8N556 730 aa11.83□□□□□ -0.52
PRPF4B-208ENST00000490653 SCUBE2Q9NQ36 999 aa11.83□□□□□ -0.52
PRPF4B-208ENST00000490653 C9orf84Q5VXU9 1444 aa11.83□□□□□ -0.52
PRPF4B-208ENST00000490653 FER1L4A9Z1Z3 1794 aa11.82□□□□□ -0.52
PRPF4B-208ENST00000490653 KDM5CP41229 1560 aa11.81□□□□□ -0.52
PRPF4B-208ENST00000490653 FKBP8Q14318 412 aa11.81□□□□□ -0.52
PRPF4B-208ENST00000490653 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
PRPF4B-208ENST00000490653 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
PRPF4B-208ENST00000490653 TRAPPC8Q9Y2L5 1435 aa11.78□□□□□ -0.52
PRPF4B-208ENST00000490653 LTBP4Q8N2S1 1624 aa11.78□□□□□ -0.52
PRPF4B-208ENST00000490653 MYO5CQ9NQX4 1742 aa11.77□□□□□ -0.52
PRPF4B-208ENST00000490653 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.52
PRPF4B-208ENST00000490653 ZNF777Q9ULD5 760 aaPredicted RBP11.77□□□□□ -0.53
PRPF4B-208ENST00000490653 ABCA6Q8N139 1617 aa11.77□□□□□ -0.53
PRPF4B-208ENST00000490653 PREX1Q8TCU6 1659 aa11.77□□□□□ -0.53
PRPF4B-208ENST00000490653 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
PRPF4B-208ENST00000490653 IER5LQ5T953 404 aa11.76□□□□□ -0.53
PRPF4B-208ENST00000490653 LCE2DQ5TA82 110 aaPredicted RBP11.76□□□□□ -0.53
PRPF4B-208ENST00000490653 FAM212AQ96EL1 285 aa11.76□□□□□ -0.53
PRPF4B-208ENST00000490653 MYT1LQ9UL68 1186 aa11.76□□□□□ -0.53
PRPF4B-208ENST00000490653 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
PRPF4B-208ENST00000490653 CEP162Q5TB80 1403 aa11.76□□□□□ -0.53
PRPF4B-208ENST00000490653 CCDC18Q5T9S5 1454 aa11.76□□□□□ -0.53
PRPF4B-208ENST00000490653 ZNF518AQ6AHZ1 1483 aa11.76□□□□□ -0.53
PRPF4B-208ENST00000490653 REREQ9P2R6 1566 aa11.75□□□□□ -0.53
PRPF4B-208ENST00000490653 HNRNPMP52272 730 aaKnown RBP eCLIP11.75□□□□□ -0.53
PRPF4B-208ENST00000490653 TRIM35Q9UPQ4 493 aa11.75□□□□□ -0.53
PRPF4B-208ENST00000490653 FYCO1Q9BQS8 1478 aa11.75□□□□□ -0.53
PRPF4B-208ENST00000490653 MLH3Q9UHC1 1453 aa11.75□□□□□ -0.53
PRPF4B-208ENST00000490653 IFNL1Q8IU54 200 aa11.74□□□□□ -0.53
PRPF4B-208ENST00000490653 PTPRTO14522 1441 aa11.73□□□□□ -0.53
PRPF4B-208ENST00000490653 SEC24BO95487 1268 aa11.73□□□□□ -0.53
PRPF4B-208ENST00000490653 AGLP35573 1532 aa11.73□□□□□ -0.53
PRPF4B-208ENST00000490653 UHRF1BP1Q6BDS2 1440 aa11.73□□□□□ -0.53
PRPF4B-208ENST00000490653 DISP3Q9P2K9 1392 aa11.73□□□□□ -0.53
PRPF4B-208ENST00000490653 GPATCH8Q9UKJ3 1502 aaKnown RBP11.73□□□□□ -0.53
PRPF4B-208ENST00000490653 C3P01024 1663 aa11.72□□□□□ -0.53
PRPF4B-208ENST00000490653 ABCC1P33527 1531 aa11.72□□□□□ -0.53
PRPF4B-208ENST00000490653 ZNF644Q9H582 1327 aaPredicted RBP11.72□□□□□ -0.53
PRPF4B-208ENST00000490653 SOCS7O14512 581 aa11.72□□□□□ -0.53
PRPF4B-208ENST00000490653 CDC42BPAQ5VT25 1732 aa11.72□□□□□ -0.53
PRPF4B-208ENST00000490653 NCOA1Q15788 1441 aa11.71□□□□□ -0.53
PRPF4B-208ENST00000490653 PCDH10Q9P2E7 1040 aa11.71□□□□□ -0.53
PRPF4B-208ENST00000490653 PREX2Q70Z35 1606 aa11.7□□□□□ -0.54
PRPF4B-208ENST00000490653 MTUS2Q5JR59 1369 aa11.69□□□□□ -0.54
PRPF4B-208ENST00000490653 CFDP1Q9UEE9 299 aaPredicted RBP11.69□□□□□ -0.54
PRPF4B-208ENST00000490653 KIDINS220Q9ULH0 1771 aa11.69□□□□□ -0.54
PRPF4B-208ENST00000490653 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
PRPF4B-208ENST00000490653 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
PRPF4B-208ENST00000490653 SAMD9LQ8IVG5 1584 aa11.67□□□□□ -0.54
PRPF4B-208ENST00000490653 ITSN2Q9NZM3 1697 aa11.66□□□□□ -0.54
PRPF4B-208ENST00000490653 KANK4Q5T7N3 995 aaPredicted RBP11.66□□□□□ -0.54
PRPF4B-208ENST00000490653 TMEM106CQ9BVX2 250 aa11.66□□□□□ -0.54
PRPF4B-208ENST00000490653 ZNF335Q9H4Z2 1342 aaPredicted RBP11.65□□□□□ -0.54
PRPF4B-208ENST00000490653 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
PRPF4B-208ENST00000490653 SPATA31D1Q6ZQQ2 1576 aa11.65□□□□□ -0.54
PRPF4B-208ENST00000490653 SPAG9O60271 1321 aaKnown RBP11.64□□□□□ -0.55
PRPF4B-208ENST00000490653 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
PRPF4B-208ENST00000490653 ZMYM3Q14202 1370 aa11.64□□□□□ -0.55
PRPF4B-208ENST00000490653 CAMSAP1Q5T5Y3 1602 aa11.64□□□□□ -0.55
PRPF4B-208ENST00000490653 FBXO3Q9UK99 471 aa11.63□□□□□ -0.55
PRPF4B-208ENST00000490653 NPATQ14207 1427 aa11.62□□□□□ -0.55
PRPF4B-208ENST00000490653 IQSEC2Q5JU85 1478 aa11.62□□□□□ -0.55
PRPF4B-208ENST00000490653 PLXNC1O60486 1568 aa11.62□□□□□ -0.55
PRPF4B-208ENST00000490653 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
PRPF4B-208ENST00000490653 SETD1BQ9UPS6 1966 aaKnown RBP11.61□□□□□ -0.55
PRPF4B-208ENST00000490653 PTPRKQ15262 1439 aa11.61□□□□□ -0.55
PRPF4B-208ENST00000490653 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms