RNA–Protein interactions for RNA: ENST00000489850.5

NOM1-208, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

TSL 1 (best)

Gene NOM1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-208ENST00000489850 MROH2AA6NES4 1674 aa31.29■■■□□ 2.6
NOM1-208ENST00000489850 PLPPR3Q6T4P5 718 aa31.28■■■□□ 2.6
NOM1-208ENST00000489850 RNF17Q9BXT8 1623 aaKnown RBP31.26■■■□□ 2.59
NOM1-208ENST00000489850 ROCK1Q13464 1354 aa31.24■■■□□ 2.59
NOM1-208ENST00000489850 ZMYM3Q14202 1370 aa31.24■■■□□ 2.59
NOM1-208ENST00000489850 KDM5DQ9BY66 1539 aa31.24■■■□□ 2.59
NOM1-208ENST00000489850 CLTCQ00610 1675 aaKnown RBP31.23■■■□□ 2.59
NOM1-208ENST00000489850 CEBPAP49715 358 aaPredicted RBP31.23■■■□□ 2.59
NOM1-208ENST00000489850 PTPRKQ15262 1439 aa31.23■■■□□ 2.59
NOM1-208ENST00000489850 C3P01024 1663 aa31.22■■■□□ 2.59
NOM1-208ENST00000489850 WASHC2CQ9Y4E1 1318 aa31.22■■■□□ 2.59
NOM1-208ENST00000489850 ITGAEP38570 1179 aa31.18■■■□□ 2.58
NOM1-208ENST00000489850 NPATQ14207 1427 aa31.17■■■□□ 2.58
NOM1-208ENST00000489850 ANKRD50Q9ULJ7 1429 aa31.15■■■□□ 2.58
NOM1-208ENST00000489850 ZC3H13Q5T200 1668 aaKnown RBP31.14■■■□□ 2.58
NOM1-208ENST00000489850 PRDM15P57071 1507 aaPredicted RBP31.14■■■□□ 2.57
NOM1-208ENST00000489850 SETD1BQ9UPS6 1966 aaKnown RBP31.13■■■□□ 2.57
NOM1-208ENST00000489850 MROH1Q8NDA8 1641 aa31.13■■■□□ 2.57
NOM1-208ENST00000489850 LMTK3Q96Q04 1460 aa31.12■■■□□ 2.57
NOM1-208ENST00000489850 DEPDC5O75140 1603 aa31.11■■■□□ 2.57
NOM1-208ENST00000489850 KANK1Q14678 1352 aa31.11■■■□□ 2.57
NOM1-208ENST00000489850 PREX1Q8TCU6 1659 aa31.1■■■□□ 2.57
NOM1-208ENST00000489850 ABCC3O15438 1527 aa31.1■■■□□ 2.57
NOM1-208ENST00000489850 UHRF1BP1Q6BDS2 1440 aa31.08■■■□□ 2.57
NOM1-208ENST00000489850 PZPP20742 1482 aa31.08■■■□□ 2.57
NOM1-208ENST00000489850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.04■■■□□ 2.563e-7■■□□□ 12.3
NOM1-208ENST00000489850 VWDEQ8N2E2 1590 aa30.99■■■□□ 2.55
NOM1-208ENST00000489850 CAMSAP1Q5T5Y3 1602 aa30.98■■■□□ 2.55
NOM1-208ENST00000489850 CEP152O94986 1710 aa30.98■■■□□ 2.55
NOM1-208ENST00000489850 LMTK2Q8IWU2 1503 aa30.98■■■□□ 2.55
NOM1-208ENST00000489850 ARHGAP31Q2M1Z3 1444 aa30.97■■■□□ 2.55
NOM1-208ENST00000489850 TNRQ92752 1358 aa30.94■■■□□ 2.54
NOM1-208ENST00000489850 UNC13BO14795 1591 aa30.93■■■□□ 2.54
NOM1-208ENST00000489850 FBXO31Q5XUX0 539 aaPredicted RBP30.93■■■□□ 2.54
NOM1-208ENST00000489850 MYO3AQ8NEV4 1616 aa30.92■■■□□ 2.54
NOM1-208ENST00000489850 HSPA2P54652 639 aa30.92■■■□□ 2.54
NOM1-208ENST00000489850 HFM1A2PYH4 1435 aa30.91■■■□□ 2.54
NOM1-208ENST00000489850 NAIPQ13075 1403 aa30.9■■■□□ 2.54
NOM1-208ENST00000489850 SPATA31D1Q6ZQQ2 1576 aa30.89■■■□□ 2.54
NOM1-208ENST00000489850 ERVK-7P63135 1459 aa30.89■■■□□ 2.53
NOM1-208ENST00000489850 GCC2Q8IWJ2 1684 aa30.88■■■□□ 2.53
NOM1-208ENST00000489850 ZNF142P52746 1687 aaPredicted RBP30.87■■■□□ 2.53
NOM1-208ENST00000489850 NLRP1Q9C000 1473 aa30.87■■■□□ 2.53
NOM1-208ENST00000489850 CEP170BQ9Y4F5 1589 aaPredicted RBP30.87■■■□□ 2.53
NOM1-208ENST00000489850 EFCAB6Q5THR3 1501 aa30.86■■■□□ 2.53
NOM1-208ENST00000489850 A2ML1A8K2U0 1454 aa30.85■■■□□ 2.53
NOM1-208ENST00000489850 NUP155O75694 1391 aa30.83■■■□□ 2.53
NOM1-208ENST00000489850 RPRD2Q5VT52 1461 aaKnown RBP30.82■■■□□ 2.53
NOM1-208ENST00000489850 TET3O43151 1660 aa30.82■■■□□ 2.52
NOM1-208ENST00000489850 IQGAP3Q86VI3 1631 aa30.81■■■□□ 2.52
NOM1-208ENST00000489850 DMRT2Q9Y5R5 561 aa30.74■■■□□ 2.51
NOM1-208ENST00000489850 CFAP65Q6ZU64 1925 aaKnown RBP30.74■■■□□ 2.51
NOM1-208ENST00000489850 PLA2R1Q13018 1463 aa30.74■■■□□ 2.51
NOM1-208ENST00000489850 UGGT1Q9NYU2 1555 aa30.72■■■□□ 2.51
NOM1-208ENST00000489850 THEMISQ8N1K5 641 aaPredicted RBP30.72■■■□□ 2.51
NOM1-208ENST00000489850 NOS1P29475 1434 aa30.72■■■□□ 2.51
NOM1-208ENST00000489850 ACIN1Q9UKV3 1341 aaKnown RBP30.71■■■□□ 2.51
NOM1-208ENST00000489850 PKD2Q13563 968 aa30.68■■■□□ 2.5
NOM1-208ENST00000489850 STRCQ7RTU9 1775 aa30.67■■■□□ 2.5
NOM1-208ENST00000489850 SLC52A1Q9NWF4 448 aa30.67■■■□□ 2.5
NOM1-208ENST00000489850 E9PCH4 1651 aa30.65■■■□□ 2.5
NOM1-208ENST00000489850 TRIM52Q96A61 297 aa30.65■■■□□ 2.5
NOM1-208ENST00000489850 SYNMO15061 1565 aa30.64■■■□□ 2.5
NOM1-208ENST00000489850 SETD5Q9C0A6 1442 aa30.63■■■□□ 2.49
NOM1-208ENST00000489850 PTPRTO14522 1441 aa30.62■■■□□ 2.49
NOM1-208ENST00000489850 IDI1Q13907 227 aa30.6■■■□□ 2.49
NOM1-208ENST00000489850 UBR1Q8IWV7 1749 aa30.59■■■□□ 2.49
NOM1-208ENST00000489850 STAG3Q9UJ98 1225 aa30.59■■■□□ 2.49
NOM1-208ENST00000489850 KDM5AP29375 1690 aaKnown RBP30.58■■■□□ 2.49
NOM1-208ENST00000489850 ANKLE2Q86XL3 938 aa30.58■■■□□ 2.49
NOM1-208ENST00000489850 PIK3C2BO00750 1634 aa30.58■■■□□ 2.49
NOM1-208ENST00000489850 NCKAP5LQ9HCH0 1330 aa30.57■■■□□ 2.48
NOM1-208ENST00000489850 SLC4A1APQ9BWU0 796 aaKnown RBP30.55■■■□□ 2.48
NOM1-208ENST00000489850 ADGRB3O60242 1522 aa30.52■■■□□ 2.48
NOM1-208ENST00000489850 POLR1AO95602 1720 aaPredicted RBP30.51■■■□□ 2.47
NOM1-208ENST00000489850 SLIT1O75093 1534 aa30.5■■■□□ 2.47
NOM1-208ENST00000489850 RAB3GAP2Q9H2M9 1393 aa30.49■■■□□ 2.47
NOM1-208ENST00000489850 ARHGAP23Q9P227 1491 aa30.49■■■□□ 2.47
NOM1-208ENST00000489850 SPHKAPQ2M3C7 1700 aa30.48■■■□□ 2.47
NOM1-208ENST00000489850 TMEM2Q9UHN6 1383 aa30.48■■■□□ 2.47
NOM1-208ENST00000489850 EID1Q9Y6B2 187 aa30.47■■■□□ 2.47
NOM1-208ENST00000489850 MED14O60244 1454 aa30.46■■■□□ 2.47
NOM1-208ENST00000489850 SCAF11Q99590 1463 aaKnown RBP30.45■■■□□ 2.47
NOM1-208ENST00000489850 NEURL4Q96JN8 1562 aa30.45■■■□□ 2.46
NOM1-208ENST00000489850 HRCP23327 699 aa30.44■■■□□ 2.46
NOM1-208ENST00000489850 TRPM2O94759 1503 aa30.43■■■□□ 2.46
NOM1-208ENST00000489850 MPHOSPH9Q99550 1183 aa30.43■■■□□ 2.46
NOM1-208ENST00000489850 NPHP4O75161 1426 aaPredicted RBP30.42■■■□□ 2.46
NOM1-208ENST00000489850 TXNDC2Q86VQ3 553 aa30.42■■■□□ 2.46
NOM1-208ENST00000489850 TMEM131LA2VDJ0 1609 aa30.41■■■□□ 2.46
NOM1-208ENST00000489850 HDGFP51858 240 aaKnown RBP30.39■■■□□ 2.46
NOM1-208ENST00000489850 CHGAP10645 457 aaKnown RBP30.38■■■□□ 2.45
NOM1-208ENST00000489850 LTKP29376 864 aa30.38■■■□□ 2.45
NOM1-208ENST00000489850 IQGAP1P46940 1657 aa30.36■■■□□ 2.45
NOM1-208ENST00000489850 ZFYVE9O95405 1425 aa30.32■■■□□ 2.44
NOM1-208ENST00000489850 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.32■■■□□ 2.44
NOM1-208ENST00000489850 CLTCL1P53675 1640 aa30.32■■■□□ 2.44
NOM1-208ENST00000489850 RIMS2Q9UQ26 1411 aa30.31■■■□□ 2.44
NOM1-208ENST00000489850 MYO5BQ9ULV0 1848 aa30.31■■■□□ 2.44
NOM1-208ENST00000489850 FOXD1Q16676 465 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms