RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 PTPRKQ15262 1439 aa27.48■■□□□ 1.99
ABCF3-217ENST00000489719 KIF15Q9NS87 1388 aa27.47■■□□□ 1.99
ABCF3-217ENST00000489719 PPARGC1BQ86YN6 1023 aaKnown RBP27.46■■□□□ 1.99
ABCF3-217ENST00000489719 FBXO31Q5XUX0 539 aaPredicted RBP27.45■■□□□ 1.98
ABCF3-217ENST00000489719 ILDR1Q86SU0 546 aaPredicted RBP27.45■■□□□ 1.98
ABCF3-217ENST00000489719 ANKRD30AQ9BXX3 1397 aa27.44■■□□□ 1.98
ABCF3-217ENST00000489719 SHANK2Q9UPX8 1470 aa27.44■■□□□ 1.98
ABCF3-217ENST00000489719 DUOX2Q9NRD8 1548 aa27.42■■□□□ 1.98
ABCF3-217ENST00000489719 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.4■■□□□ 1.98
ABCF3-217ENST00000489719 KDM5DQ9BY66 1539 aa27.4■■□□□ 1.98
ABCF3-217ENST00000489719 FAM135AQ9P2D6 1515 aa27.39■■□□□ 1.98
ABCF3-217ENST00000489719 TNRQ92752 1358 aa27.36■■□□□ 1.97
ABCF3-217ENST00000489719 DNMT1P26358 1616 aaKnown RBP27.36■■□□□ 1.97
ABCF3-217ENST00000489719 PZPP20742 1482 aa27.35■■□□□ 1.97
ABCF3-217ENST00000489719 NCOA1Q15788 1441 aa27.34■■□□□ 1.97
ABCF3-217ENST00000489719 ERBINQ96RT1 1412 aa27.34■■□□□ 1.97
ABCF3-217ENST00000489719 NCKAP5LQ9HCH0 1330 aa27.32■■□□□ 1.96
ABCF3-217ENST00000489719 PKD2Q13563 968 aa27.31■■□□□ 1.96
ABCF3-217ENST00000489719 KANK1Q14678 1352 aa27.31■■□□□ 1.96
ABCF3-217ENST00000489719 EIF2AK4Q9P2K8 1649 aaKnown RBP27.3■■□□□ 1.96
ABCF3-217ENST00000489719 PTPRTO14522 1441 aa27.3■■□□□ 1.96
ABCF3-217ENST00000489719 FBXO41Q8TF61 875 aa27.29■■□□□ 1.96
ABCF3-217ENST00000489719 RNF17Q9BXT8 1623 aaKnown RBP27.29■■□□□ 1.96
ABCF3-217ENST00000489719 THEMISQ8N1K5 641 aaPredicted RBP27.28■■□□□ 1.96
ABCF3-217ENST00000489719 CERKQ8TCT0 537 aa27.28■■□□□ 1.96
ABCF3-217ENST00000489719 CROCC2H7BZ55 1655 aa27.27■■□□□ 1.96
ABCF3-217ENST00000489719 CAMSAP1Q5T5Y3 1602 aa27.27■■□□□ 1.96
ABCF3-217ENST00000489719 ABCC3O15438 1527 aa27.27■■□□□ 1.96
ABCF3-217ENST00000489719 A2ML1A8K2U0 1454 aa27.27■■□□□ 1.96
ABCF3-217ENST00000489719 ITGAEP38570 1179 aa27.27■■□□□ 1.96
ABCF3-217ENST00000489719 STRCQ7RTU9 1775 aa27.25■■□□□ 1.95
ABCF3-217ENST00000489719 CEP170BQ9Y4F5 1589 aaPredicted RBP27.24■■□□□ 1.95
ABCF3-217ENST00000489719 ADGRL2O95490 1459 aa27.24■■□□□ 1.95
ABCF3-217ENST00000489719 MYO3AQ8NEV4 1616 aa27.23■■□□□ 1.95
ABCF3-217ENST00000489719 PLA2R1Q13018 1463 aa27.2■■□□□ 1.95
ABCF3-217ENST00000489719 ANKLE2Q86XL3 938 aa27.2■■□□□ 1.94
ABCF3-217ENST00000489719 ANKRD50Q9ULJ7 1429 aa27.2■■□□□ 1.94
ABCF3-217ENST00000489719 MROH1Q8NDA8 1641 aa27.19■■□□□ 1.94
ABCF3-217ENST00000489719 NLRP1Q9C000 1473 aa27.19■■□□□ 1.94
ABCF3-217ENST00000489719 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.18■■□□□ 1.94
ABCF3-217ENST00000489719 ZC3H13Q5T200 1668 aaKnown RBP27.17■■□□□ 1.94
ABCF3-217ENST00000489719 ARHGAP31Q2M1Z3 1444 aa27.16■■□□□ 1.94
ABCF3-217ENST00000489719 ZNF142P52746 1687 aaPredicted RBP27.15■■□□□ 1.94
ABCF3-217ENST00000489719 ERVK-7P63135 1459 aa27.15■■□□□ 1.94
ABCF3-217ENST00000489719 ROCK1Q13464 1354 aa27.15■■□□□ 1.94
ABCF3-217ENST00000489719 PRDM15P57071 1507 aaPredicted RBP27.15■■□□□ 1.94
ABCF3-217ENST00000489719 SPATA31D1Q6ZQQ2 1576 aa27.11■■□□□ 1.93
ABCF3-217ENST00000489719 UGGT1Q9NYU2 1555 aa27.11■■□□□ 1.93
ABCF3-217ENST00000489719 STAG3Q9UJ98 1225 aa27.1■■□□□ 1.93
ABCF3-217ENST00000489719 CEP152O94986 1710 aa27.08■■□□□ 1.93
ABCF3-217ENST00000489719 DEPDC5O75140 1603 aa27.07■■□□□ 1.92
ABCF3-217ENST00000489719 ZNF335Q9H4Z2 1342 aaPredicted RBP27.06■■□□□ 1.92
ABCF3-217ENST00000489719 LMTK2Q8IWU2 1503 aa27.06■■□□□ 1.92
ABCF3-217ENST00000489719 IDI1Q13907 227 aa27.04■■□□□ 1.92
ABCF3-217ENST00000489719 VWDEQ8N2E2 1590 aa27.02■■□□□ 1.92
ABCF3-217ENST00000489719 RRBP1Q9P2E9 1410 aaKnown RBP27.02■■□□□ 1.92
ABCF3-217ENST00000489719 TXNDC2Q86VQ3 553 aa27.01■■□□□ 1.91
ABCF3-217ENST00000489719 SLC52A1Q9NWF4 448 aa27.01■■□□□ 1.91
ABCF3-217ENST00000489719 EID1Q9Y6B2 187 aa27.01■■□□□ 1.91
ABCF3-217ENST00000489719 CFAP65Q6ZU64 1925 aaKnown RBP27■■□□□ 1.91
ABCF3-217ENST00000489719 NUP155O75694 1391 aa26.98■■□□□ 1.91
ABCF3-217ENST00000489719 NPHP4O75161 1426 aaPredicted RBP26.97■■□□□ 1.91
ABCF3-217ENST00000489719 LTBP4Q8N2S1 1624 aa26.97■■□□□ 1.91
ABCF3-217ENST00000489719 NOS1P29475 1434 aa26.94■■□□□ 1.9
ABCF3-217ENST00000489719 LTKP29376 864 aa26.94■■□□□ 1.9
ABCF3-217ENST00000489719 EFCAB6Q5THR3 1501 aa26.93■■□□□ 1.9
ABCF3-217ENST00000489719 MED14O60244 1454 aa26.93■■□□□ 1.9
ABCF3-217ENST00000489719 RPRD2Q5VT52 1461 aaKnown RBP26.93■■□□□ 1.9
ABCF3-217ENST00000489719 TMEM2Q9UHN6 1383 aa26.9■■□□□ 1.9
ABCF3-217ENST00000489719 NEURL4Q96JN8 1562 aa26.89■■□□□ 1.9
ABCF3-217ENST00000489719 SCAF11Q99590 1463 aaKnown RBP26.87■■□□□ 1.89
ABCF3-217ENST00000489719 IQSEC2Q5JU85 1478 aa26.87■■□□□ 1.89
ABCF3-217ENST00000489719 UNC13BO14795 1591 aa26.86■■□□□ 1.89
ABCF3-217ENST00000489719 CHGAP10645 457 aaKnown RBP26.86■■□□□ 1.89
ABCF3-217ENST00000489719 HDGFP51858 240 aaKnown RBP26.86■■□□□ 1.89
ABCF3-217ENST00000489719 POLR1AO95602 1720 aaPredicted RBP26.85■■□□□ 1.89
ABCF3-217ENST00000489719 UBR1Q8IWV7 1749 aa26.85■■□□□ 1.89
ABCF3-217ENST00000489719 UBAP1LF5GYI3 381 aa26.85■■□□□ 1.89
ABCF3-217ENST00000489719 ARHGAP23Q9P227 1491 aa26.85■■□□□ 1.89
ABCF3-217ENST00000489719 SLIT1O75093 1534 aa26.85■■□□□ 1.89
ABCF3-217ENST00000489719 TRIM52Q96A61 297 aa26.83■■□□□ 1.89
ABCF3-217ENST00000489719 SYNMO15061 1565 aa26.83■■□□□ 1.89
ABCF3-217ENST00000489719 PIK3C2BO00750 1634 aa26.83■■□□□ 1.88
ABCF3-217ENST00000489719 TET3O43151 1660 aa26.82■■□□□ 1.88
ABCF3-217ENST00000489719 BCANQ96GW7 911 aa26.82■■□□□ 1.88
ABCF3-217ENST00000489719 NAIPQ13075 1403 aa26.82■■□□□ 1.88
ABCF3-217ENST00000489719 CPS1P31327 1500 aa26.78■■□□□ 1.88
ABCF3-217ENST00000489719 PPP1R15AO75807 674 aaPredicted RBP26.77■■□□□ 1.88
ABCF3-217ENST00000489719 IQGAP1P46940 1657 aa26.76■■□□□ 1.87
ABCF3-217ENST00000489719 IQGAP3Q86VI3 1631 aa26.76■■□□□ 1.87
ABCF3-217ENST00000489719 TOM1O60784 492 aa26.75■■□□□ 1.87
ABCF3-217ENST00000489719 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.75■■□□□ 1.87
ABCF3-217ENST00000489719 HFM1A2PYH4 1435 aa26.74■■□□□ 1.87
ABCF3-217ENST00000489719 GCC2Q8IWJ2 1684 aa26.74■■□□□ 1.87
ABCF3-217ENST00000489719 SLC26A8Q96RN1 970 aa26.74■■□□□ 1.87
ABCF3-217ENST00000489719 ADGRB3O60242 1522 aa26.74■■□□□ 1.87
ABCF3-217ENST00000489719 KDM5AP29375 1690 aaKnown RBP26.73■■□□□ 1.87
ABCF3-217ENST00000489719 SENP3Q9H4L4 574 aaPredicted RBP26.71■■□□□ 1.87
ABCF3-217ENST00000489719 E9PCH4 1651 aa26.7■■□□□ 1.86
ABCF3-217ENST00000489719 SLC4A1APQ9BWU0 796 aaKnown RBP26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms