RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 KIF3BO15066 747 aa12.03□□□□□ -0.48
SSR1-210ENST00000489567 GGT6Q6P531 493 aa12.02□□□□□ -0.48
SSR1-210ENST00000489567 FER1L4A9Z1Z3 1794 aa12.02□□□□□ -0.49
SSR1-210ENST00000489567 ADGRL2O95490 1459 aa12.02□□□□□ -0.49
SSR1-210ENST00000489567 ANKRD30AQ9BXX3 1397 aa12.01□□□□□ -0.49
SSR1-210ENST00000489567 DUOX2Q9NRD8 1548 aa12.01□□□□□ -0.49
SSR1-210ENST00000489567 CEBPAP49715 358 aaPredicted RBP12□□□□□ -0.49
SSR1-210ENST00000489567 ERBINQ96RT1 1412 aa11.97□□□□□ -0.49
SSR1-210ENST00000489567 EIF2AK4Q9P2K8 1649 aaKnown RBP11.97□□□□□ -0.49
SSR1-210ENST00000489567 ROCK1Q13464 1354 aa11.97□□□□□ -0.49
SSR1-210ENST00000489567 MROH1Q8NDA8 1641 aa11.97□□□□□ -0.49
SSR1-210ENST00000489567 RNF17Q9BXT8 1623 aaKnown RBP11.97□□□□□ -0.49
SSR1-210ENST00000489567 CLTCQ00610 1675 aaKnown RBP11.96□□□□□ -0.5
SSR1-210ENST00000489567 ESF1Q9H501 851 aaKnown RBP11.95□□□□□ -0.5
SSR1-210ENST00000489567 CNTLNQ9NXG0 1405 aa11.95□□□□□ -0.5
SSR1-210ENST00000489567 ANKRD50Q9ULJ7 1429 aa11.95□□□□□ -0.5
SSR1-210ENST00000489567 ZMYM3Q14202 1370 aa11.95□□□□□ -0.5
SSR1-210ENST00000489567 C3P01024 1663 aa11.95□□□□□ -0.5
SSR1-210ENST00000489567 WASHC2CQ9Y4E1 1318 aa11.94□□□□□ -0.5
SSR1-210ENST00000489567 KDM5DQ9BY66 1539 aa11.93□□□□□ -0.5
SSR1-210ENST00000489567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.93□□□□□ -0.51e-10■■■□□ 14.7
SSR1-210ENST00000489567 MROH2AA6NES4 1674 aa11.93□□□□□ -0.5
SSR1-210ENST00000489567 DEPDC5O75140 1603 aa11.92□□□□□ -0.5
SSR1-210ENST00000489567 ABCC3O15438 1527 aa11.92□□□□□ -0.5
SSR1-210ENST00000489567 PRDM15P57071 1507 aaPredicted RBP11.92□□□□□ -0.5
SSR1-210ENST00000489567 NAIPQ13075 1403 aa11.91□□□□□ -0.5
SSR1-210ENST00000489567 FAM135AQ9P2D6 1515 aa11.9□□□□□ -0.5
SSR1-210ENST00000489567 CEP152O94986 1710 aa11.9□□□□□ -0.5
SSR1-210ENST00000489567 FBXO31Q5XUX0 539 aaPredicted RBP11.89□□□□□ -0.51
SSR1-210ENST00000489567 VWDEQ8N2E2 1590 aa11.89□□□□□ -0.51
SSR1-210ENST00000489567 LMTK3Q96Q04 1460 aa11.88□□□□□ -0.51
SSR1-210ENST00000489567 ZC3H13Q5T200 1668 aaKnown RBP11.88□□□□□ -0.51
SSR1-210ENST00000489567 HFM1A2PYH4 1435 aa11.88□□□□□ -0.51
SSR1-210ENST00000489567 PZPP20742 1482 aa11.87□□□□□ -0.51
SSR1-210ENST00000489567 UNC13BO14795 1591 aa11.87□□□□□ -0.51
SSR1-210ENST00000489567 CAMSAP1Q5T5Y3 1602 aa11.87□□□□□ -0.51
SSR1-210ENST00000489567 NPATQ14207 1427 aa11.86□□□□□ -0.51
SSR1-210ENST00000489567 GCC2Q8IWJ2 1684 aa11.86□□□□□ -0.51
SSR1-210ENST00000489567 KANK1Q14678 1352 aa11.86□□□□□ -0.51
SSR1-210ENST00000489567 LMTK2Q8IWU2 1503 aa11.85□□□□□ -0.51
SSR1-210ENST00000489567 HSPA2P54652 639 aa11.85□□□□□ -0.51
SSR1-210ENST00000489567 PREX1Q8TCU6 1659 aa11.84□□□□□ -0.51
SSR1-210ENST00000489567 NUP155O75694 1391 aa11.84□□□□□ -0.51
SSR1-210ENST00000489567 ARHGAP31Q2M1Z3 1444 aa11.83□□□□□ -0.52
SSR1-210ENST00000489567 UHRF1BP1Q6BDS2 1440 aa11.83□□□□□ -0.52
SSR1-210ENST00000489567 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
SSR1-210ENST00000489567 SETD1BQ9UPS6 1966 aaKnown RBP11.83□□□□□ -0.52
SSR1-210ENST00000489567 EFCAB6Q5THR3 1501 aa11.83□□□□□ -0.52
SSR1-210ENST00000489567 TNRQ92752 1358 aa11.82□□□□□ -0.52
SSR1-210ENST00000489567 SPATA31D1Q6ZQQ2 1576 aa11.82□□□□□ -0.52
SSR1-210ENST00000489567 IQGAP3Q86VI3 1631 aa11.82□□□□□ -0.52
SSR1-210ENST00000489567 MYO3AQ8NEV4 1616 aa11.82□□□□□ -0.52
SSR1-210ENST00000489567 CFAP65Q6ZU64 1925 aaKnown RBP11.8□□□□□ -0.52
SSR1-210ENST00000489567 TET3O43151 1660 aa11.8□□□□□ -0.52
SSR1-210ENST00000489567 CEP170BQ9Y4F5 1589 aaPredicted RBP11.79□□□□□ -0.52
SSR1-210ENST00000489567 SETD5Q9C0A6 1442 aa11.79□□□□□ -0.52
SSR1-210ENST00000489567 E9PCH4 1651 aa11.78□□□□□ -0.52
SSR1-210ENST00000489567 NOS1P29475 1434 aa11.78□□□□□ -0.52
SSR1-210ENST00000489567 TRIM52Q96A61 297 aa11.78□□□□□ -0.52
SSR1-210ENST00000489567 ZNF142P52746 1687 aaPredicted RBP11.78□□□□□ -0.52
SSR1-210ENST00000489567 A2ML1A8K2U0 1454 aa11.77□□□□□ -0.52
SSR1-210ENST00000489567 SYNMO15061 1565 aa11.77□□□□□ -0.53
SSR1-210ENST00000489567 RPRD2Q5VT52 1461 aaKnown RBP11.77□□□□□ -0.53
SSR1-210ENST00000489567 RAB3GAP2Q9H2M9 1393 aa11.77□□□□□ -0.53
SSR1-210ENST00000489567 NLRP1Q9C000 1473 aa11.76□□□□□ -0.53
SSR1-210ENST00000489567 IDI1Q13907 227 aa11.74□□□□□ -0.53
SSR1-210ENST00000489567 UGGT1Q9NYU2 1555 aa11.74□□□□□ -0.53
SSR1-210ENST00000489567 STRCQ7RTU9 1775 aa11.73□□□□□ -0.53
SSR1-210ENST00000489567 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
SSR1-210ENST00000489567 PKD2Q13563 968 aa11.72□□□□□ -0.53
SSR1-210ENST00000489567 PIK3C2BO00750 1634 aa11.72□□□□□ -0.53
SSR1-210ENST00000489567 UBR1Q8IWV7 1749 aa11.71□□□□□ -0.53
SSR1-210ENST00000489567 NCKAP5LQ9HCH0 1330 aa11.71□□□□□ -0.54
SSR1-210ENST00000489567 PTPRTO14522 1441 aa11.71□□□□□ -0.54
SSR1-210ENST00000489567 PLA2R1Q13018 1463 aa11.7□□□□□ -0.54
SSR1-210ENST00000489567 MPHOSPH9Q99550 1183 aa11.7□□□□□ -0.54
SSR1-210ENST00000489567 SLC52A1Q9NWF4 448 aa11.7□□□□□ -0.54
SSR1-210ENST00000489567 THEMISQ8N1K5 641 aaPredicted RBP11.7□□□□□ -0.54
SSR1-210ENST00000489567 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
SSR1-210ENST00000489567 TRIM26Q12899 539 aaPredicted RBP11.69□□□□□ -0.54
SSR1-210ENST00000489567 ADGRB3O60242 1522 aa11.68□□□□□ -0.54
SSR1-210ENST00000489567 HRCP23327 699 aa11.67□□□□□ -0.54
SSR1-210ENST00000489567 STAG3Q9UJ98 1225 aa11.67□□□□□ -0.54
SSR1-210ENST00000489567 TRPM2O94759 1503 aa11.67□□□□□ -0.54
SSR1-210ENST00000489567 NEURL4Q96JN8 1562 aa11.66□□□□□ -0.54
SSR1-210ENST00000489567 TMEM131LA2VDJ0 1609 aa11.66□□□□□ -0.54
SSR1-210ENST00000489567 LTKP29376 864 aa11.66□□□□□ -0.54
SSR1-210ENST00000489567 ARHGAP23Q9P227 1491 aa11.66□□□□□ -0.54
SSR1-210ENST00000489567 CLTCL1P53675 1640 aa11.66□□□□□ -0.54
SSR1-210ENST00000489567 KDM5AP29375 1690 aaKnown RBP11.66□□□□□ -0.54
SSR1-210ENST00000489567 SLIT1O75093 1534 aa11.65□□□□□ -0.54
SSR1-210ENST00000489567 TMEM2Q9UHN6 1383 aa11.65□□□□□ -0.54
SSR1-210ENST00000489567 MYO5BQ9ULV0 1848 aa11.65□□□□□ -0.54
SSR1-210ENST00000489567 CHGAP10645 457 aaKnown RBP11.65□□□□□ -0.54
SSR1-210ENST00000489567 ANKLE2Q86XL3 938 aa11.65□□□□□ -0.54
SSR1-210ENST00000489567 ACIN1Q9UKV3 1341 aaKnown RBP11.64□□□□□ -0.55
SSR1-210ENST00000489567 POLR1AO95602 1720 aaPredicted RBP11.64□□□□□ -0.55
SSR1-210ENST00000489567 TXNDC2Q86VQ3 553 aa11.63□□□□□ -0.55
SSR1-210ENST00000489567 DMRT2Q9Y5R5 561 aa11.63□□□□□ -0.55
SSR1-210ENST00000489567 SCAF11Q99590 1463 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms