RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 RNF17Q9BXT8 1623 aaKnown RBP24.04■■□□□ 1.44
HDAC7-224ENST00000488927 HFM1A2PYH4 1435 aa24.03■■□□□ 1.44
HDAC7-224ENST00000488927 FER1L4A9Z1Z3 1794 aa24.01■■□□□ 1.43
HDAC7-224ENST00000488927 NAIPQ13075 1403 aa24■■□□□ 1.43
HDAC7-224ENST00000488927 WASHC2CQ9Y4E1 1318 aa23.98■■□□□ 1.43
HDAC7-224ENST00000488927 KANK1Q14678 1352 aa23.98■■□□□ 1.43
HDAC7-224ENST00000488927 PTPRMP28827 1452 aa23.98■■□□□ 1.43
HDAC7-224ENST00000488927 DEPDC5O75140 1603 aa23.97■■□□□ 1.43
HDAC7-224ENST00000488927 PRDM15P57071 1507 aaPredicted RBP23.97■■□□□ 1.43
HDAC7-224ENST00000488927 KDM5DQ9BY66 1539 aa23.97■■□□□ 1.43
HDAC7-224ENST00000488927 RIMS1Q86UR5 1692 aaKnown RBP23.96■■□□□ 1.43
HDAC7-224ENST00000488927 GCC2Q8IWJ2 1684 aa23.96■■□□□ 1.43
HDAC7-224ENST00000488927 MROH1Q8NDA8 1641 aa23.95■■□□□ 1.42
HDAC7-224ENST00000488927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.93■■□□□ 1.42
HDAC7-224ENST00000488927 MROH2AA6NES4 1674 aa23.92■■□□□ 1.42
HDAC7-224ENST00000488927 ZC3H13Q5T200 1668 aaKnown RBP23.92■■□□□ 1.42
HDAC7-224ENST00000488927 ACIN1Q9UKV3 1341 aaKnown RBP23.92■■□□□ 1.42
HDAC7-224ENST00000488927 ZMYM3Q14202 1370 aa23.91■■□□□ 1.42
HDAC7-224ENST00000488927 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
HDAC7-224ENST00000488927 ABCC3O15438 1527 aa23.9■■□□□ 1.42
HDAC7-224ENST00000488927 CLTCQ00610 1675 aaKnown RBP23.9■■□□□ 1.42
HDAC7-224ENST00000488927 UNC13BO14795 1591 aa23.9■■□□□ 1.42
HDAC7-224ENST00000488927 TRIM26Q12899 539 aaPredicted RBP23.89■■□□□ 1.41
HDAC7-224ENST00000488927 VWDEQ8N2E2 1590 aa23.88■■□□□ 1.41
HDAC7-224ENST00000488927 SETD5Q9C0A6 1442 aa23.87■■□□□ 1.41
HDAC7-224ENST00000488927 LMTK2Q8IWU2 1503 aa23.87■■□□□ 1.41
HDAC7-224ENST00000488927 NUP155O75694 1391 aa23.85■■□□□ 1.41
HDAC7-224ENST00000488927 CEBPAP49715 358 aaPredicted RBP23.84■■□□□ 1.41
HDAC7-224ENST00000488927 PZPP20742 1482 aa23.83■■□□□ 1.41
HDAC7-224ENST00000488927 ARHGAP31Q2M1Z3 1444 aa23.83■■□□□ 1.4
HDAC7-224ENST00000488927 C3P01024 1663 aa23.83■■□□□ 1.4
HDAC7-224ENST00000488927 PLPPR3Q6T4P5 718 aa23.82■■□□□ 1.4
HDAC7-224ENST00000488927 NPATQ14207 1427 aa23.82■■□□□ 1.4
HDAC7-224ENST00000488927 CEP152O94986 1710 aa23.81■■□□□ 1.4
HDAC7-224ENST00000488927 CAMSAP1Q5T5Y3 1602 aa23.8■■□□□ 1.4
HDAC7-224ENST00000488927 IQGAP3Q86VI3 1631 aa23.8■■□□□ 1.4
HDAC7-224ENST00000488927 TRIM52Q96A61 297 aa23.79■■□□□ 1.4
HDAC7-224ENST00000488927 HRCP23327 699 aa23.78■■□□□ 1.4
HDAC7-224ENST00000488927 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
HDAC7-224ENST00000488927 EFCAB6Q5THR3 1501 aa23.77■■□□□ 1.4
HDAC7-224ENST00000488927 TET3O43151 1660 aa23.76■■□□□ 1.39
HDAC7-224ENST00000488927 RPRD2Q5VT52 1461 aaKnown RBP23.75■■□□□ 1.39
HDAC7-224ENST00000488927 FBXO31Q5XUX0 539 aaPredicted RBP23.72■■□□□ 1.39
HDAC7-224ENST00000488927 ERVK-7P63135 1459 aa23.71■■□□□ 1.39
HDAC7-224ENST00000488927 TNRQ92752 1358 aa23.71■■□□□ 1.39
HDAC7-224ENST00000488927 SETD1BQ9UPS6 1966 aaKnown RBP23.71■■□□□ 1.39
HDAC7-224ENST00000488927 SPATA31D1Q6ZQQ2 1576 aa23.7■■□□□ 1.38
HDAC7-224ENST00000488927 UHRF1BP1Q6BDS2 1440 aa23.69■■□□□ 1.38
HDAC7-224ENST00000488927 SLC4A1APQ9BWU0 796 aaKnown RBP23.69■■□□□ 1.38
HDAC7-224ENST00000488927 PREX1Q8TCU6 1659 aa23.67■■□□□ 1.38
HDAC7-224ENST00000488927 NLRP1Q9C000 1473 aa23.65■■□□□ 1.38
HDAC7-224ENST00000488927 NOS1P29475 1434 aa23.65■■□□□ 1.38
HDAC7-224ENST00000488927 MPHOSPH9Q99550 1183 aa23.64■■□□□ 1.37
HDAC7-224ENST00000488927 E9PCH4 1651 aa23.64■■□□□ 1.37
HDAC7-224ENST00000488927 PKD2Q13563 968 aa23.62■■□□□ 1.37
HDAC7-224ENST00000488927 MYO3AQ8NEV4 1616 aa23.62■■□□□ 1.37
HDAC7-224ENST00000488927 LMTK3Q96Q04 1460 aa23.62■■□□□ 1.37
HDAC7-224ENST00000488927 SLC52A1Q9NWF4 448 aa23.61■■□□□ 1.37
HDAC7-224ENST00000488927 A2ML1A8K2U0 1454 aa23.59■■□□□ 1.37
HDAC7-224ENST00000488927 PTPRTO14522 1441 aa23.58■■□□□ 1.36
HDAC7-224ENST00000488927 CEP170BQ9Y4F5 1589 aaPredicted RBP23.57■■□□□ 1.36
HDAC7-224ENST00000488927 ZNF142P52746 1687 aaPredicted RBP23.57■■□□□ 1.36
HDAC7-224ENST00000488927 CFAP65Q6ZU64 1925 aaKnown RBP23.56■■□□□ 1.36
HDAC7-224ENST00000488927 SYNMO15061 1565 aa23.56■■□□□ 1.36
HDAC7-224ENST00000488927 IDI1Q13907 227 aa23.53■■□□□ 1.36
HDAC7-224ENST00000488927 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
HDAC7-224ENST00000488927 THEMISQ8N1K5 641 aaPredicted RBP23.52■■□□□ 1.36
HDAC7-224ENST00000488927 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
HDAC7-224ENST00000488927 SPHKAPQ2M3C7 1700 aa23.51■■□□□ 1.35
HDAC7-224ENST00000488927 TRPM2O94759 1503 aa23.51■■□□□ 1.35
HDAC7-224ENST00000488927 STAG3Q9UJ98 1225 aa23.5■■□□□ 1.35
HDAC7-224ENST00000488927 PIK3C2BO00750 1634 aa23.48■■□□□ 1.35
HDAC7-224ENST00000488927 HSPA2P54652 639 aa23.48■■□□□ 1.35
HDAC7-224ENST00000488927 FOXD1Q16676 465 aa23.48■■□□□ 1.35
HDAC7-224ENST00000488927 KDM5AP29375 1690 aaKnown RBP23.48■■□□□ 1.35
HDAC7-224ENST00000488927 PLA2R1Q13018 1463 aa23.47■■□□□ 1.35
HDAC7-224ENST00000488927 ADGRB3O60242 1522 aa23.45■■□□□ 1.34
HDAC7-224ENST00000488927 CCDC144AA2RUR9 1427 aa23.43■■□□□ 1.34
HDAC7-224ENST00000488927 UBR1Q8IWV7 1749 aa23.43■■□□□ 1.34
HDAC7-224ENST00000488927 CHGAP10645 457 aaKnown RBP23.4■■□□□ 1.34
HDAC7-224ENST00000488927 CLTCL1P53675 1640 aa23.4■■□□□ 1.34
HDAC7-224ENST00000488927 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
HDAC7-224ENST00000488927 ANKLE2Q86XL3 938 aa23.39■■□□□ 1.33
HDAC7-224ENST00000488927 TMEM2Q9UHN6 1383 aa23.39■■□□□ 1.33
HDAC7-224ENST00000488927 SLIT1O75093 1534 aa23.38■■□□□ 1.33
HDAC7-224ENST00000488927 TMEM131LA2VDJ0 1609 aa23.38■■□□□ 1.33
HDAC7-224ENST00000488927 HDGFP51858 240 aaKnown RBP23.38■■□□□ 1.33
HDAC7-224ENST00000488927 DMRT2Q9Y5R5 561 aa23.37■■□□□ 1.33
HDAC7-224ENST00000488927 EID1Q9Y6B2 187 aa23.37■■□□□ 1.33
HDAC7-224ENST00000488927 ARHGAP23Q9P227 1491 aa23.36■■□□□ 1.33
HDAC7-224ENST00000488927 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
HDAC7-224ENST00000488927 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.33■■□□□ 1.33
HDAC7-224ENST00000488927 KIF1BO60333 1816 aa23.32■■□□□ 1.32
HDAC7-224ENST00000488927 TXNDC2Q86VQ3 553 aa23.32■■□□□ 1.32
HDAC7-224ENST00000488927 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
HDAC7-224ENST00000488927 SCAF11Q99590 1463 aaKnown RBP23.31■■□□□ 1.32
HDAC7-224ENST00000488927 ZNF326Q5BKZ1 582 aaKnown RBP23.31■■□□□ 1.32
HDAC7-224ENST00000488927 NEURL4Q96JN8 1562 aa23.31■■□□□ 1.32
HDAC7-224ENST00000488927 RIMS2Q9UQ26 1411 aa23.3■■□□□ 1.32
HDAC7-224ENST00000488927 RPGRIP1LQ68CZ1 1315 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms