RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 NISCHQ9Y2I1 1504 aa38.13■■■■□ 3.69
HDAC7-224ENST00000488927 CCDC180Q9P1Z9 1646 aa33.78■■■■□ 3
HDAC7-224ENST00000488927 ABCC9O60706 1549 aa32.71■■■□□ 2.83
HDAC7-224ENST00000488927 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
HDAC7-224ENST00000488927 DCAF8L2P0C7V8 631 aa31.73■■■□□ 2.67
HDAC7-224ENST00000488927 NACADO15069 1562 aa31.72■■■□□ 2.67
HDAC7-224ENST00000488927 MYO15BQ96JP2 1530 aa31.67■■■□□ 2.66
HDAC7-224ENST00000488927 RB1CC1Q8TDY2 1594 aa31.66■■■□□ 2.66
HDAC7-224ENST00000488927 DCAF1Q9Y4B6 1507 aa31.62■■■□□ 2.65
HDAC7-224ENST00000488927 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
HDAC7-224ENST00000488927 SCRIBQ14160 1630 aa30.79■■■□□ 2.52
HDAC7-224ENST00000488927 PABPN1Q86U42 306 aaKnown RBP eCLIP30.62■■■□□ 2.49
HDAC7-224ENST00000488927 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
HDAC7-224ENST00000488927 SHROOM4Q9ULL8 1493 aa30.48■■■□□ 2.47
HDAC7-224ENST00000488927 EIF4G1Q04637 1599 aaKnown RBP29.83■■■□□ 2.37
HDAC7-224ENST00000488927 DNAJC5BQ9UF47 199 aa29.71■■■□□ 2.35
HDAC7-224ENST00000488927 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
HDAC7-224ENST00000488927 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
HDAC7-224ENST00000488927 BAZ1AQ9NRL2 1556 aaPredicted RBP29.56■■■□□ 2.32
HDAC7-224ENST00000488927 SMARCA4P51532 1647 aa29.5■■■□□ 2.31
HDAC7-224ENST00000488927 MROH2BQ7Z745 1585 aa29.35■■■□□ 2.29
HDAC7-224ENST00000488927 SMARCA2P51531 1590 aa29.31■■■□□ 2.28
HDAC7-224ENST00000488927 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
HDAC7-224ENST00000488927 NCAPD3P42695 1498 aa29.26■■■□□ 2.27
HDAC7-224ENST00000488927 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.27
HDAC7-224ENST00000488927 RSF1Q96T23 1441 aaPredicted RBP29.17■■■□□ 2.26
HDAC7-224ENST00000488927 HMGXB3Q12766 1538 aa29.14■■■□□ 2.25
HDAC7-224ENST00000488927 BAZ1BQ9UIG0 1483 aaKnown RBP29.09■■■□□ 2.25
HDAC7-224ENST00000488927 WIZO95785 1651 aa29.02■■■□□ 2.24
HDAC7-224ENST00000488927 TOP2AP11388 1531 aaKnown RBP28.81■■■□□ 2.2
HDAC7-224ENST00000488927 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
HDAC7-224ENST00000488927 CCDC88BA6NC98 1476 aa28.45■■■□□ 2.14
HDAC7-224ENST00000488927 LAMC3Q9Y6N6 1575 aa28.43■■■□□ 2.14
HDAC7-224ENST00000488927 CADPSQ9ULU8 1353 aa28.43■■■□□ 2.14
HDAC7-224ENST00000488927 NESP48681 1621 aa28.37■■■□□ 2.13
HDAC7-224ENST00000488927 CFTRP13569 1480 aa28.31■■■□□ 2.12
HDAC7-224ENST00000488927 PDS5BQ9NTI5 1447 aa28.27■■■□□ 2.12
HDAC7-224ENST00000488927 ERCC6Q03468 1493 aa28.23■■■□□ 2.11
HDAC7-224ENST00000488927 FANCD2Q9BXW9 1451 aa28.08■■■□□ 2.09
HDAC7-224ENST00000488927 PRDM2Q13029 1718 aa28.05■■■□□ 2.08
HDAC7-224ENST00000488927 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
HDAC7-224ENST00000488927 CEP164Q9UPV0 1460 aa28.02■■■□□ 2.08
HDAC7-224ENST00000488927 MRC2Q9UBG0 1479 aa27.92■■■□□ 2.06
HDAC7-224ENST00000488927 THOC2Q8NI27 1593 aaKnown RBP27.9■■■□□ 2.06
HDAC7-224ENST00000488927 CUX2O14529 1486 aa27.84■■■□□ 2.05
HDAC7-224ENST00000488927 WDR62O43379 1518 aa27.81■■■□□ 2.04
HDAC7-224ENST00000488927 ABCC8Q09428 1581 aa27.75■■■□□ 2.03
HDAC7-224ENST00000488927 URB2Q14146 1524 aaKnown RBP27.74■■■□□ 2.03
HDAC7-224ENST00000488927 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
HDAC7-224ENST00000488927 TOPBP1Q92547 1522 aa27.65■■■□□ 2.02
HDAC7-224ENST00000488927 CUX1P39880 1505 aa27.52■■■□□ 2
HDAC7-224ENST00000488927 WRNQ14191 1432 aaPredicted RBP eCLIP27.52■■■□□ 2
HDAC7-224ENST00000488927 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
HDAC7-224ENST00000488927 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
HDAC7-224ENST00000488927 FGD5Q6ZNL6 1462 aa27.41■■□□□ 1.98
HDAC7-224ENST00000488927 TOP2BQ02880 1626 aa27.4■■□□□ 1.98
HDAC7-224ENST00000488927 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
HDAC7-224ENST00000488927 SYNJ1O43426 1573 aa27.36■■□□□ 1.97
HDAC7-224ENST00000488927 SOGA1O94964 1423 aa27.35■■□□□ 1.97
HDAC7-224ENST00000488927 TARBP1Q13395 1621 aaKnown RBP27.3■■□□□ 1.96
HDAC7-224ENST00000488927 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
HDAC7-224ENST00000488927 ZNF608Q9ULD9 1512 aaPredicted RBP27.21■■□□□ 1.95
HDAC7-224ENST00000488927 WDR97A6NE52 1622 aa27.19■■□□□ 1.94
HDAC7-224ENST00000488927 ABCA10Q8WWZ4 1543 aa27.19■■□□□ 1.94
HDAC7-224ENST00000488927 EIF4G3O43432 1585 aaKnown RBP27.14■■□□□ 1.93
HDAC7-224ENST00000488927 TDRD9Q8NDG6 1382 aaKnown RBP27.13■■□□□ 1.93
HDAC7-224ENST00000488927 AQRO60306 1485 aaKnown RBP eCLIP27.12■■□□□ 1.932e-9■■■■■ 37.4
HDAC7-224ENST00000488927 TRIM41Q8WV44 630 aa27.09■■□□□ 1.93
HDAC7-224ENST00000488927 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
HDAC7-224ENST00000488927 GRIN2BQ13224 1484 aa27.01■■□□□ 1.91
HDAC7-224ENST00000488927 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.91
HDAC7-224ENST00000488927 KIF27Q86VH2 1401 aa26.95■■□□□ 1.9
HDAC7-224ENST00000488927 MAGI1Q96QZ7 1491 aaPredicted RBP26.92■■□□□ 1.9
HDAC7-224ENST00000488927 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
HDAC7-224ENST00000488927 PBRM1Q86U86 1689 aa26.89■■□□□ 1.9
HDAC7-224ENST00000488927 SNAPC4Q5SXM2 1469 aa26.89■■□□□ 1.9
HDAC7-224ENST00000488927 ERICH3Q5RHP9 1530 aa26.88■■□□□ 1.89
HDAC7-224ENST00000488927 SYNJ2O15056 1496 aa26.8■■□□□ 1.88
HDAC7-224ENST00000488927 CHMP7Q8WUX9 453 aaPredicted RBP26.78■■□□□ 1.88
HDAC7-224ENST00000488927 FHAD1B1AJZ9 1412 aa26.76■■□□□ 1.87
HDAC7-224ENST00000488927 IGF1RP08069 1367 aa26.76■■□□□ 1.87
HDAC7-224ENST00000488927 FBLN2P98095 1184 aa26.76■■□□□ 1.87
HDAC7-224ENST00000488927 OSCARQ8IYS5 282 aa26.76■■□□□ 1.87
HDAC7-224ENST00000488927 ADAMTS12P58397 1594 aa26.74■■□□□ 1.87
HDAC7-224ENST00000488927 CHD1O14646 1710 aa26.69■■□□□ 1.86
HDAC7-224ENST00000488927 CUL7Q14999 1698 aa26.68■■□□□ 1.86
HDAC7-224ENST00000488927 EEA1Q15075 1411 aa26.67■■□□□ 1.86
HDAC7-224ENST00000488927 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
HDAC7-224ENST00000488927 GRIN2AQ12879 1464 aa26.64■■□□□ 1.86
HDAC7-224ENST00000488927 CARMIL1Q5VZK9 1371 aa26.62■■□□□ 1.85
HDAC7-224ENST00000488927 DNAJC5Q9H3Z4 198 aa26.61■■□□□ 1.85
HDAC7-224ENST00000488927 CSRNP3Q8WYN3 585 aa26.54■■□□□ 1.84
HDAC7-224ENST00000488927 NUP160Q12769 1436 aa26.52■■□□□ 1.84
HDAC7-224ENST00000488927 RAPGEF2Q9Y4G8 1499 aa26.5■■□□□ 1.83
HDAC7-224ENST00000488927 PRXQ9BXM0 1461 aa26.48■■□□□ 1.83
HDAC7-224ENST00000488927 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
HDAC7-224ENST00000488927 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
HDAC7-224ENST00000488927 FAM9AQ8IZU1 332 aaPredicted RBP26.44■■□□□ 1.82
HDAC7-224ENST00000488927 KIAA0586Q9BVV6 1533 aa26.36■■□□□ 1.81
HDAC7-224ENST00000488927 KIF21BO75037 1637 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms